Streptacidiphilus monticola NEAU-SW11 is an aerobe, spore-forming bacterium that was isolated from soil of Xianglu Mountain.
spore-forming aerobe genome sequence 16S sequence Bacteria| @ref 20215 |
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| Domain Bacteria |
| Phylum Actinomycetota |
| Class Actinomycetes |
| Order Kitasatosporales |
| Family Streptomycetaceae |
| Genus Streptacidiphilus |
| Species Streptacidiphilus monticola |
| Full scientific name Streptacidiphilus monticola Song et al. 2018 |
| @ref | Production | Name | |
|---|---|---|---|
| 65476 | diffusible pigments |
| @ref: | 64992 |
| multimedia content: | DSM_105744.jpg |
| multimedia.multimedia content: | https://www.dsmz.de/microorganisms/photos/DSM_105744.jpg |
| caption: | Medium 252 28°C |
| intellectual property rights: | © Leibniz-Institut DSMZ |
| manual_annotation: | 1 |
| @ref | Name | Growth | Medium link | Composition | |
|---|---|---|---|---|---|
| 64992 | GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) | Medium recipe at MediaDive | Name: GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) Composition: Agar 18.0 g/l Malt extract 10.0 g/l Yeast extract 4.0 g/l Glucose 4.0 g/l CaCO3 2.0 g/l Distilled water | ||
| 64992 | STARCH - MINERAL SALT - AGAR (STMS) (DSMZ Medium 252) | Medium recipe at MediaDive | Name: STARCH - MINERAL SALT - AGAR (STMS) (DSMZ Medium 252) Composition: Agar 14.985 g/l Starch 9.99001 g/l (NH4)2SO4 1.998 g/l CaCO3 1.998 g/l K2HPO4 0.999001 g/l MgSO4 x 7 H2O 0.999001 g/l NaCl 0.999001 g/l FeSO4 x 7 H2O 0.000999001 g/l MnCl2 x 4 H2O 0.000999001 g/l ZnSO4 x 7 H2O 0.000999001 g/l Distilled water | ||
| 64992 | ROLLED OATS MINERAL MEDIUM (DSMZ Medium 84) | Medium recipe at MediaDive | Name: ROLLED OATS MINERAL MEDIUM (DSMZ Medium 84) Composition: Agar 20.0 g/l Rolled oats 20.0 g/l ZnSO4 x 7 H2O 0.001 g/l MnCl2 x 4 H2O 0.001 g/l FeSO4 x 7 H2O 0.001 g/l Distilled water | ||
| 65476 | International Streptomyces Project 2 medium | ||||
| 65476 | International Streptomyces Project 3 medium | ||||
| 65476 | International Streptomyces Project 5 medium | ||||
| 65476 | International Streptomyces Project 1 medium | ||||
| 65476 | International Streptomyces Project 7 medium | ||||
| 65476 | Bennett's media | ||||
| 65476 | Czapek's media | ||||
| 65476 | Nutrient agar (NA) | ||||
| 65476 | International Streptomyces Project 4 medium | ||||
| 65476 | International Streptomyces Project 6 medium | ||||
| 65476 | Trypticase soya agar media |
| 65476 | Oxygen toleranceaerobe |
| @ref | Spore description | Spore formation | |
|---|---|---|---|
| 65476 | flexuous to straight spore chains consisting of cylindrical spores (0.8-0.9x1.0-1.1µm), spore surface is smooth |
| @ref | Observation | |
|---|---|---|
| 65476 | forms well-developed substrate mycelia and aerial mycelia that differentiate into flexuous to straight spore chains | |
| 65476 | contain LL-diaminopimelic acid as a major diamino acid(76 %) and a minor amount of meso-diaminopimelic (24 %) | |
| 65476 | whole-cell hydrolysates are rhamnose, ribose, glucose and galactose | |
| 65476 | polar lipids contain diphosphatidylglycerol, phosphatidylethanolamine, phosphatidylinositol, phosphatidylinositol mannoside and two unidentified phospholipids | |
| 65476 | predominant menaquinones are MK-9(H8) and MK-9(H6) |
| @ref | Chebi-ID | Metabolite | Utilization activity | Kind of utilization tested | |
|---|---|---|---|---|---|
| 65476 | 16919 ChEBI | creatine | - | nitrogen source | |
| 65476 | 15824 ChEBI | D-fructose | + | carbon source | |
| 65476 | 12936 ChEBI | D-galactose | + | carbon source | |
| 65476 | 17634 ChEBI | D-glucose | + | carbon source | |
| 65476 | 16899 ChEBI | D-mannitol | + | carbon source | |
| 65476 | 16024 ChEBI | D-mannose | + | carbon source | |
| 65476 | 16988 ChEBI | D-ribose | - | carbon source | |
| 65476 | 17924 ChEBI | D-sorbitol | - | carbon source | |
| 65476 | 65327 ChEBI | D-xylose | - | carbon source | |
| 65476 | 4853 ChEBI | esculin | + | hydrolysis | |
| 65476 | 5291 ChEBI | gelatin | - | assimilation | |
| 65476 | 15428 ChEBI | glycine | + | nitrogen source | |
| 65476 | 16977 ChEBI | L-alanine | + | nitrogen source | |
| 65476 | 30849 ChEBI | L-arabinose | - | carbon source | |
| 65476 | 16467 ChEBI | L-arginine | + | nitrogen source | |
| 65476 | 17196 ChEBI | L-asparagine | + | nitrogen source | |
| 65476 | 29991 ChEBI | L-aspartate | + | nitrogen source | |
| 65476 | 29985 ChEBI | L-glutamate | + | nitrogen source | |
| 65476 | 18050 ChEBI | L-glutamine | + | nitrogen source | |
| 65476 | 17203 ChEBI | L-proline | + | nitrogen source | |
| 65476 | 62345 ChEBI | L-rhamnose | + | carbon source | |
| 65476 | 17115 ChEBI | L-serine | + | nitrogen source | |
| 65476 | 16857 ChEBI | L-threonine | + | nitrogen source | |
| 65476 | 17895 ChEBI | L-tyrosine | + | nitrogen source | |
| 65476 | 17716 ChEBI | lactose | + | carbon source | |
| 65476 | 17306 ChEBI | maltose | + | carbon source | |
| 65476 | milk | + | assimilation | ||
| 65476 | 17268 ChEBI | myo-inositol | - | carbon source | |
| 65476 | 17632 ChEBI | nitrate | - | reduction | |
| 65476 | 16634 ChEBI | raffinose | + | carbon source | |
| 65476 | 28017 ChEBI | starch | + | hydrolysis | |
| 65476 | 17992 ChEBI | sucrose | + | carbon source | |
| 65476 | 53424 ChEBI | tween 20 | - | degradation | |
| 65476 | 53423 ChEBI | tween 40 | - | degradation | |
| 65476 | 53426 ChEBI | tween 80 | - | degradation |
| Metadata FA analysis | |||||||||||||||||||||||
| type of FA analysis | whole cell analysis | ||||||||||||||||||||||
| incubation medium | International Streptomyces Project 2 | ||||||||||||||||||||||
| agar/liquid | liquid | ||||||||||||||||||||||
| incubation temperature | 28 | ||||||||||||||||||||||
| incubation time | 7 | ||||||||||||||||||||||
| library/peak naming table | NIST MS Search 2.0 database | ||||||||||||||||||||||
| system | MIS MIDI | ||||||||||||||||||||||
| instrument | gas chromatography–mass spectrometry | ||||||||||||||||||||||
| method/protocol | Xiang et al. 2011 | ||||||||||||||||||||||
| @ref | 65476 | ||||||||||||||||||||||
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| @ref | Sample type | Geographic location | Country | Country ISO 3 Code | Continent | Latitude | Longitude | Enrichment culture duration | Enrichment culture temperature | Isolation procedure | |
|---|---|---|---|---|---|---|---|---|---|---|---|
| 64992 | soil of Xianglu Mountain | Bin County, Harbin City, Heilongjiang Province (45° 45' 0'' N, 127° 28' 48'' E) | China | CHN | Asia | 45.75 | 127.48 45.75/127.48 | ||||
| 65476 | soil collected at 10-15cm depth at Xianglu Mountain, Binxin | Heilongjiang Province | China | CHN | Asia | 46.25 | 127.8 46.25/127.8 | 15 days | 28 | sample was processed as described by Zheng and placed on a plate of cellulose-proline agar, supplemented with cycloheximide (50mgl^-1) and nalidixic acid (50mgl^-1), the medium pH was 7.2 |
| @ref | Description | Assembly level | INSDC accession | NCBI tax ID | Score | |
|---|---|---|---|---|---|---|
| 124043 | ASM4267506v1 assembly for Streptacidiphilus monticola CGMCC 4.7427 | contig | 2161674 | 1.11 | ||
| 124043 | ASM4265850v1 assembly for Streptacidiphilus monticola CGMCC 4.7427 | scaffold | 2161674 | 0.44 |
| @ref | Description | Accession | Length | Database | NCBI tax ID | |
|---|---|---|---|---|---|---|
| 64992 | Streptacidiphilus monticola strain NEAU-SW11 16S ribosomal RNA gene, partial sequence | MF993054 | 1509 | 2161674 |
| Topic | Title | Authors | Journal | DOI | Year | |
|---|---|---|---|---|---|---|
| Phylogeny | Streptacidiphilus monticola sp. nov., a novel actinomycete isolated from soil. | Song W, Duan L, Jin L, Zhao J, Jiang S, Sun T, Guo XW, Xiang W, Wang X | Int J Syst Evol Microbiol | 10.1099/ijsem.0.002751 | 2018 |
| #20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 ) |
| #64992 | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 105744 |
| #65476 | Wei Song, Liping Duan, Liying Jin, Junwei Zhao, Shanwen Jiang, Tianyu Sun, Xiao Wei Guo, Wensheng Xiang, Xiangjing Wang: Streptacidiphilus monticola sp. nov., a novel actinomycete isolated from soil. IJSEM 68: 1757 - 1761 2018 ( DOI 10.1099/ijsem.0.002751 , PubMed 29620496 ) |
| #124043 | Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy . |
| #126262 | A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 ) |
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