Desulfonatronum parangueonense (DSM 103602, JCM 31598, PAR180)

Name: Desulfonatronum parangueonense (DSM 103602, JCM 31598, PAR180)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 158308

Type strain

Strain Designation PAR180

Culture col. no. DSM 103602 JCM 31598 PAR180

NCBI tax ID(s) 2047730

Special Collections DSMZ JCM Literature strains

History DSMZ <- A. Hirschler-Réa, Mediterranean Inst. of Oceanography (MIO), Marseille, France; PAR180 <- F. Perez Bernal; {2015} JCM <-- A. Hirschler-Réa; Aix-Marseille Univ., France; PAR180.

Links

Desulfonatronum parangueonense PAR180 is an anaerobe, halotolerant, Gram-negative bacterium that was isolated from sediment of an alkaline crater lake located in a maar of phreatomagmatic origin.

Gram-negative motile vibrio-shaped anaerobe halotolerant 16S sequence Bacteria

Name and taxonomic classification

SI-ID 401976

JCM 31598,DSM 103602

@ref 20215

Last LPSN update 2026-05-29 08:43:56

Domain Bacteria

Phylum Thermodesulfobacteriota

Class Desulfovibrionia

Order Desulfovibrionales

Family Desulfonatronaceae

Genus Desulfonatronum

Species Desulfonatronum parangueonense

Full scientific name Desulfonatronum parangueonense Pérez Bernal et al. 2017

Morphology

Cell morphology

@ref	Gram stain	Cell length	Cell width	Cell shape	Motility	Flagellum arrangement
65221	negative	1.2-2.3 µm	0.7-0.9 µm	vibrio-shaped		monotrichous, polar

Culture and growth conditions

Culture medium

@ref	Name	Growth	Medium link	Composition
64971	DESULFONATRONUM LACUSTRE MEDIUM (DSMZ Medium 813b)		Medium recipe at MediaDive	Name: DESULFONATRONUM LACUSTRE MEDIUM (DSMZ Medium 813b) Composition: Na2SO4 4.98504 g/l Na2CO3 3.48953 g/l Na-L-lactate 1.99402 g/l NaCl 1.99402 g/l NH4Cl 0.997009 g/l Yeast extract 0.997009 g/l Na2S x 9 H2O 0.498504 g/l KCl 0.199402 g/l KH2PO4 0.199402 g/l MgCl2 x 6 H2O 0.0997009 g/l HCl 0.00249252 g/l FeCl2 x 4 H2O 0.00149551 g/l NaOH 0.000498504 g/l Sodium resazurin 0.000498504 g/l CoCl2 x 6 H2O 0.000189432 g/l Pyridoxine hydrochloride 9.97009e-05 g/l MnCl2 x 4 H2O 9.97009e-05 g/l ZnCl2 6.97906e-05 g/l Calcium D-(+)-pantothenate 4.98504e-05 g/l Nicotinic acid 4.98504e-05 g/l Riboflavin 4.98504e-05 g/l Thiamine HCl 4.98504e-05 g/l (DL)-alpha-Lipoic acid 4.98504e-05 g/l p-Aminobenzoic acid 4.98504e-05 g/l Na2MoO4 x 2 H2O 3.58923e-05 g/l NiCl2 x 6 H2O 2.39282e-05 g/l Biotin 1.99402e-05 g/l Folic acid 1.99402e-05 g/l H3BO3 5.98205e-06 g/l Na2WO4 x 2 H2O 3.98804e-06 g/l Na2SeO3 x 5 H2O 2.99103e-06 g/l CuCl2 x 2 H2O 1.99402e-06 g/l Vitamin B12 9.97009e-07 g/l Distilled water

Culture temp

@ref	Growth	Type	Temperature (°C)
64971	positive	growth	35
65221	positive	growth	15-40
65221	positive	optimum	35
67770	positive	growth	35

Culture pH

@ref	Ability	Type	PH	PH range
65221	positive	optimum	9
65221	positive	growth	8.3-10.4	alkaliphile

Physiology and metabolism

Oxygen tolerance

65221

Oxygen toleranceanaerobe

Spore formation

65221

Spore formationno

Halophily

@ref	Halophily level	Salt	Growth	Tested relation	Concentration
65221	halotolerant	NaCl	positive	growth	0-80 g/L
65221	halotolerant	NaCl	positive	optimum	5 g/L

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Environmental	#Aquatic	#Lake (large)
#Environmental	#Aquatic	#Sediment
#Condition	#Alkaline	-

Isolation

@ref	Sample type	Sampling date	Geographic location	Country	Country ISO 3 Code	Continent	Latitude	Longitude	Enrichment culture	Enrichment culture composition	Enrichment culture duration	Enrichment culture temperature	Isolation procedure
64971	sediment of an alkaline crater lake located in a maar of phreatomagmatic origin		state of Guanajuato, Vallee de Santiago, Rincón de Parangueo crater	Mexico	MEX	North America	20.4167	-101.2 20.4167/-101.2
65221	sediment sample	2013-09	crater soda lake, Rincón de Parangueo	Mexico	MEX	North America	20.4166	-101.202 20.4166/-101.202	1 : 1 (v/v) proportion with filtered water of the sampling site and distilled water	(per litre): Na 2 SO 4 , 4 g; Na 2 S 2 O 3 , 0.79 g; NH 4 Cl, 0.25 g; KH 2 PO 4 , 0.2 g; NaCl, 15 g; yeast extract, 0.1 g; HEPES, 10 mM; selenite tungstate solution [18], 1 ml; trace element SL12 solution [19], 1 ml; resazurin solution 0.1 % (w/v), 1 ml. The pH was adjusted to 9.	3-4 weeks	30	After sterilization, the culture medium was immediately flushed with nitrogen gas. Prior to use, the following components were added from anoxic sterile solutions: vitamin V7 solution [20], 1 ml; FeSO4-7H2O, 1 mM, to monitor sulfidogenic activity (removal of sulfide by production of FeS); and Na2S2O4 , 0.2 mM, as reductant. A mixture of four substrates, namely sodium acetate, sodium lactate, sodium pyruvate and glycerol (5 mM each), was added to serum bottles containing 50 ml of culture medium.
67770	Sediment collected at an alkaline crater lake in Guanajuato			Mexico	MEX	North America

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
64971	1	Risk group (German classification)

Sequence information

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
64971	Desulfonatronum parangueonense strain PAR180 16S ribosomal RNA gene, partial sequence	KY041865	1518		2047730

GC content

@ref	GC-content (mol%)	Method
64971	56.1	high performance liquid chromatography (HPLC)

Genome-based predictions

Literature

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Desulfonatronum parangueonense sp. nov., a sulfate-reducing bacterium isolated from sediment of an alkaline crater lake.	Perez Bernal MF, Souza Brito EM, Bartoli M, Aube J, Fardeau ML, Cuevas Rodriguez G, Ollivier B, Guyoneaud R, Hirschler-Rea A	Int J Syst Evol Microbiol	10.1099/ijsem.0.002399	2017

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#64971	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 103602
#65221	Maria Fernanda Pérez Bernal, Elcia Margareth Souza Brito, Manon Bartoli, Johanne Aubé, Marie-Laure Fardeau, German Cuevas Rodriguez, Bernard Ollivier, Rémy Guyoneaud, Agnès Hirschler-Réa: Desulfonatronum parangueonense sp. nov., a sulfate-reducing bacterium isolated from sediment of an alkaline crater lake. IJSEM 67: 4999 - 5005 2017 ( DOI 10.1099/ijsem.0.002399 , PubMed 29039304 )
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

Rate our new design

Content

About us

Desulfonatronum parangueonense (DSM 103602, JCM 31598, PAR180)

Name and taxonomic classification

Morphology

Cell morphology

Culture and growth conditions

Culture medium

Culture temp

Culture pH

Physiology and metabolism

Oxygen tolerance

Spore formation

Halophily

Isolation, sampling and environmental information

Isolation source categories

Isolation

Interaction and safety

Risk assessment

Sequence information

16S sequences

GC content

Genome-based predictions

Literature

Literature

References

BacDive

Help

Social Media