Name: Flavicella marina 2A-7
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 158178

Type strain:

Species: Flavicella marina

Strain Designation: 2A-7

Culture col. no.: DSM 107616, KCTC 42197, NBRC 110145

Strain history: <- NBRC <- M. Teramoto, Oceanography Section, Kochi University, Kohasu, Japan; 2A-7

NCBI tax ID(s): 1475951 (species)

SI-ID 406196

DSM 107616

Section

Flavicella marina 2A-7 is a mesophilic bacterium that was isolated from surface seawater.

mesophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacteroidota*
	Class	*Flavobacteriia*
	Order	*Flavobacteriales*
	Family	*Flavobacteriaceae*
	Genus	*Flavicella*
	Species	**Flavicella marina**
	Full Scientific Name (LPSN)	Flavicella marina Teramoto and Nishijima 2015

Information on culture and growth conditions Culture and growth conditions

[Ref.: #64771]

Culture medium

MARINE BROTH (ROTH CP73) (DSMZ Medium 514f)

[Ref.: #64771]

Culture medium growth

[Ref.: #64771]

Culture medium link

Medium recipe at MediaDive

[Ref.: #64771]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #64771]			growth	25 °C

[Ref.: #64771]

Temperature range

mesophilic

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #64771]	Sample type/isolated from	surface seawater
[Ref.: #64771]	Geographic location (country and/or sea, region)	Muroto city
[Ref.: #64771]	Country	Japan
[Ref.: #64771]	Country ISO 3 Code	JPN
[Ref.: #64771]	Continent	Asia
[Ref.: #64771]	Geographic location	33.3000°/134.1830°
* marker position based on {}

Isolation sources categories

#Environmental	#Aquatic	#Marine
#Environmental	#Aquatic	#Surface water

What are isolation sources categories?

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #64771]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #64771]	Flavicella marina gene for 16S ribosomal RNA, partial sequence	AB915171	1375	ENA	1475951 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Flavicella marina 2A-7	GCA_009193215	contig	GenBank	1475951 tax ID	*
[Ref.: #66792]	Flavicella marina 2A-7	2887124424	draft	JGI IMG/M	1475951 tax ID	*

Availability in culture collections External links

[Ref.: #64771]

Culture collection no.

DSM 107616, KCTC 42197, NBRC 110145

[Ref.: #111009]

SI-ID 406196

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Flavicella marina gen. nov., sp. nov., a carotenoid-producing bacterium from surface seawater.	Teramoto M, Nishijima M	Int J Syst Evol Microbiol	10.1099/ijs.0.000018	2014	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#64771

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 107616

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#111009

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID406196.1 )

* These data were automatically processed and therefore are not curated

Change proposal

You found an error in BacDive? Please tell us about it!

Note that changes will be reviewed and judged. If your changes are legitimate, changes will occur within the next BacDive update. Only proposed changes supported by the according reference will be reviewed. The BacDive team reserves the right to reject proposed changes.

Search for species Flavicella marina in external resources:
SILVA
BRENDA
PANGAEA
StrainInfo
GBIF