Faecalicatena acetigenes (DSM 108153, H2_18, JCM 34816)

Name: Faecalicatena acetigenes (DSM 108153, H2_18, JCM 34816)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 158078

Type strain

Strain Designation H2_18

Culture col. no. DSM 108153 H2_18 JCM 34816

NCBI tax ID(s) 2981790

Special Collections DSMZ JCM

History DSMZ <- H. Browne, Wellcome Trust Sanger Institute, Hinxton, Cambridgeshire, United Kingdom; H2_18

Links

Faecalicatena acetigenes H2_18 is a bacterium that was isolated from human faeces.

genome sequence Bacteria

Name and taxonomic classification

SI-ID 402419

JCM 34816,DSM 108153

@ref 20215

Last LPSN update 2026-05-29 08:43:53

Domain Bacteria

Phylum Bacillota

Class Clostridia

Order Eubacteriales

Family Lachnospiraceae

Genus Faecalicatena

Species Faecalicatena acetigenes

Full scientific name Faecalicatena acetigenes Hitch et al. 2022

Morphology

Culture and growth conditions

Culture medium

@ref	Name	Growth	Medium link	Composition
64652	YCFA-MEDIUM (MODIFIED) (DSMZ Medium 1611)		Medium recipe at MediaDive	Name: YCFA MEDIUM (modified) (DSMZ Medium 1611) Composition: Casitone 10.0 g/l Glucose 5.0 g/l NaHCO3 4.0 g/l Yeast extract 2.5 g/l Acetic acid 1.78695 g/l L-Cysteine HCl 1.0 g/l NaCl 0.9 g/l Propionic acid 0.62559 g/l KH2PO4 0.45 g/l K2HPO4 0.45 g/l CaCl2 x 2 H2O 0.09 g/l n-Valeric acid 0.08451 g/l iso-Valeric acid 0.0837899 g/l iso-Butyric acid 0.07695 g/l MgSO4 x 7 H2O 0.045 g/l Hemin 0.01 g/l Resazurin 0.001 g/l Pyridoxine hydrochloride 0.0001 g/l Nicotinic acid 5e-05 g/l Thiamine-HCl x 2 H2O 5e-05 g/l Riboflavin 5e-05 g/l D-Calcium pantothenate 5e-05 g/l p-Aminobenzoic acid 5e-05 g/l Lipoic acid 5e-05 g/l Folic acid 2e-05 g/l Biotin 2e-05 g/l Vitamin B12 1e-06 g/l Distilled water

Culture temp

@ref	Growth	Type	Temperature (°C)
64652	positive	growth	37

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
125439	facultative anaerobe	98.365

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Host	#Human	-
#Host Body Product	#Gastrointestinal tract	#Feces (Stool)

Isolation

@ref	Sample type	Host species	Geographic location	Country	Country ISO 3 Code	Continent
64652	human faeces	Homo sapiens	Cambridgeshire	United Kingdom	GBR	Europe

Interaction and safety

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
66792	ASM2556717v1 assembly for Faecalicatena acetigenes H2_18	scaffold	GCA_025567175	2981790.5	8065758539	2981790	69.36

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: ASM2556717v1 assembly for Faecalicatena acetigenes H2_18
NCBI: GCA_025567175

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	oxygen_tolerance	BacteriaNetⓘ	facultative anaerobe	98.37	no
125439	gram_stain	BacteriaNetⓘ	variable	58.39	no
125439	motility	BacteriaNetⓘ	yes	83.16	no
125439	spore_formation	BacteriaNetⓘ	yes	73.16	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Faecalicatena acetigenes H2_18
NCBI: GCA_025567175.1

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	yes	77.18	no
125438	anaerobic	anaerobicⓘ	yes	89.10	no
125438	aerobic	aerobicⓘ	no	96.62	no
125438	spore-forming	spore-formingⓘ	no	50.77	no
125438	thermophilic	thermophileⓘ	no	90.34	no
125438	flagellated	motile2+ⓘ	no	81.64	no

Literature

Title	Authors	Journal	DOI	Year
Clades, classifications, and claims: evolution of organisms and their nomenclature in life science patents.	Jacobs NT.	J Law Biosci	10.1093/jlb/lsaf026	2025

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#64652	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 108153
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Faecalicatena acetigenes (DSM 108153, H2_18, JCM 34816)

Name and taxonomic classification

Morphology

Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Oxygen tolerance

Isolation, sampling and environmental information

Isolation source categories

Isolation

Interaction and safety

Sequence information

Genome sequences

Genome browser: GCA_025567175

Genome-based predictions

Predictions

Literature

Literature

References

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