Blastococcus sp. (DSM 46790, BC 502, C6Q)

Name: Blastococcus sp. (DSM 46790, BC 502, C6Q)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 158034

Type strain

Strain Designation C6Q

Culture col. no. DSM 46790 BC 502 C6Q

NCBI tax ID(s) 2723059

Special Collections DSMZ

Links

C6Q is a mesophilic prokaryote that was isolated from Marble.

mesophilic 16S sequence

Name and taxonomic classification

SI-ID 404147

DSM 46790

@ref 20215

Last LPSN update 2025-12-16 10:07:56

Domain Bacillati

Phylum Actinomycetota

Class Actinomycetes

Order Geodermatophilales

Family Geodermatophilaceae

Genus Blastococcus

Full scientific name Blastococcus Ahrens and Moll 1970 (Approved Lists 1980)

Morphology

Cell morphology

@ref	Gram stain	Confidence
125439	positive	99.3

Culture and growth conditions

Culture medium

@ref	Name	Growth	Medium link	Composition
64607	GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)		Medium recipe at MediaDive	Name: GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) Composition: Agar 18.0 g/l Malt extract 10.0 g/l Yeast extract 4.0 g/l Glucose 4.0 g/l CaCO3 2.0 g/l Distilled water
64607	GPHF-MEDIUM (DSMZ Medium 553)		Medium recipe at MediaDive	Name: GPHF-MEDIUM (DSMZ Medium 553) Composition: Agar 20.0 g/l Glucose 10.0 g/l Beef extract 5.0 g/l Yeast extract 5.0 g/l Casein peptone 5.0 g/l CaCl2 x 2 H2O 0.74 g/l Distilled water

Culture temp

@ref	Growth	Type	Temperature (°C)	Range
64607	positive	growth	28	mesophilic

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
125439	obligate aerobe	99.8

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Environmental	#Terrestrial	#Geologic

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent
64607	Marble	Carrara Quarry	Italy	ITA	Europe

Interaction and safety

Sequence information

Genome sequences

@ref	Description	Assembly level	IMG accession	NCBI tax ID	Score	BV-BRC accession
66792	Blastococcus sp. DSM 46790	complete	2849312728	2723059	99.53
66792	Blastococcus sp. DSM 46790	contig		2723059	75.22	2723059.3

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
124043	Blastococcus sp. strain DSM 46790 16S ribosomal RNA gene, partial sequence.	OR252349	1445		1873459

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: Blastococcus sp. DSM 46790
PATRIC: 2723059.3

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	spore_formation	BacteriaNetⓘ	yes	52.50	no
125439	motility	BacteriaNetⓘ	no	75.00	no
125439	gram_stain	BacteriaNetⓘ	positive	99.30	no
125439	oxygen_tolerance	BacteriaNetⓘ	obligate aerobe	99.80	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Blastococcus sp. DSM 46790
PATRIC: 2723059.3

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	yes	89.84	no
125438	anaerobic	anaerobicⓘ	no	96.53	no
125438	spore-forming	spore-formingⓘ	yes	62.88	no
125438	aerobic	aerobicⓘ	yes	86.84	no
125438	thermophilic	thermophileⓘ	no	96.50	no
125438	flagellated	motile2+ⓘ	no	62.00	no

Literature

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#64607	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 46790
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#124043	Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy .
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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