Name: Marinitenerispora sediminis TPS16
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 157905

Type strain:

Species: Marinitenerispora sediminis

Strain Designation: TPS16

Culture col. no.: DSM 46825, TBRC 5138

Strain history: <- G. Y. A. Tan, Univ. of Malaya, Kuala Lumpur, Malaysia; TPS16 <- Z. Y. Ng, Inst. of Biological Sciences,Univ. of Malaya

NCBI tax ID(s): 1931232 (species)

SI-ID 405376

DSM 46825

Section

Marinitenerispora sediminis TPS16 is an aerobe, spore-forming, mesophilic bacterium that builds an aerial mycelium and was isolated from Marine sediments collected at a 7 m depth.

filament-shaped
Gram-positive
spore-forming
aerobe
mesophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Actinomycetota*
	Class	*Actinomycetes*
	Order	*Streptosporangiales*
	Family	*Nocardiopsidaceae*
	Genus	*Marinitenerispora*
	Species	**Marinitenerispora sediminis**
	Full Scientific Name (LPSN)	Marinitenerispora sediminis Ng et al. 2019

Information on morphological and physiological properties Morphology

[Ref.: #68011]	Gram stain	positive

[Ref.: #68011]	Cell shape	filament-shaped

[Ref.: #69475]	Colony color	Beige (1001)
[Ref.: #69475]	Cultivation medium used	ISP 6

[Ref.: #69475]	Colony color	Beige (1001)
[Ref.: #69475]	Cultivation medium used	suter with tyrosine

[Ref.: #69475]	Colony color	Beige (1001)
[Ref.: #69475]	Cultivation medium used	suter without tyrosine

[Ref.: #68011]	Colony color	powdery, blue
[Ref.: #68011]	Incubation period	14-21 days
[Ref.: #68011]	Cultivation medium used	ISP 1

[Ref.: #69475]	Colony color	Grey brown (8019), pale brown (8025)
[Ref.: #69475]	Cultivation medium used	ISP 4

[Ref.: #69475]	Colony color	Khaki grey (7008)
[Ref.: #69475]	Cultivation medium used	ISP 2

[Ref.: #69475]	Colony color	Light ivory (1014)
[Ref.: #69475]	Cultivation medium used	ISP 7

[Ref.: #69475]	Colony color	Light ivory (1015), blue grey (7031)
[Ref.: #69475]	Cultivation medium used	ISP 5

[Ref.: #69475]	Colony color	Red brown (8012), grey brown (8019)
[Ref.: #69475]	Cultivation medium used	ISP 3

[Ref.: #68011]	Pigment production	yes
[Ref.: #68011]	Pigmentation color	blue
[Ref.: #68011]	Pigment name	blue diffusible pigment
[Ref.: #69475]	Pigment production	no
[Ref.: #69475]	Pigment name	Melanin
[Ref.: #69475]	Pigment production	yes
[Ref.: #69475]	Pigmentation color	Copper brown (8004), nut brown (8011), pale brown (8025)
[Ref.: #69475]	Pigment name	soluble pigment

[Ref.: #69475]	Multicellular complex forming ability	yes
[Ref.: #69475]	Multicellular complex name	Aerial mycelium
[Ref.: #69475]	Multicellular complex color	Signal white (9003), pigeon blue (5014), gentian blue (5010)
[Ref.: #69475]	Medium Name (multicellularity)	ISP 2

[Ref.: #69475]	Multicellular complex forming ability	yes
[Ref.: #69475]	Multicellular complex name	Aerial mycelium
[Ref.: #69475]	Multicellular complex color	Signal white (9003), pigeon blue (5014), light pink (3015)
[Ref.: #69475]	Medium Name (multicellularity)	ISP 3

[Ref.: #69475]	Multicellular complex forming ability	yes
[Ref.: #69475]	Multicellular complex name	Aerial mycelium
[Ref.: #69475]	Multicellular complex color	Signal white (9003)
[Ref.: #69475]	Medium Name (multicellularity)	ISP 4

[Ref.: #69475]	Multicellular complex forming ability	yes
[Ref.: #69475]	Multicellular complex name	Aerial mycelium
[Ref.: #69475]	Multicellular complex color	Signal white (9003), light blue (5012)
[Ref.: #69475]	Medium Name (multicellularity)	ISP 5

[Ref.: #69475]	Multicellular complex forming ability	yes
[Ref.: #69475]	Multicellular complex name	Aerial mycelium
[Ref.: #69475]	Multicellular complex color	Signal white (9003)
[Ref.: #69475]	Medium Name (multicellularity)	ISP 6

[Ref.: #69475]	Multicellular complex forming ability	yes
[Ref.: #69475]	Multicellular complex name	Aerial mycelium
[Ref.: #69475]	Multicellular complex color	Signal white (9003)
[Ref.: #69475]	Medium Name (multicellularity)	ISP 7

[Ref.: #69475]	Multicellular complex forming ability	yes
[Ref.: #69475]	Multicellular complex name	Aerial mycelium
[Ref.: #69475]	Multicellular complex color	Signal white (9003)
[Ref.: #69475]	Medium Name (multicellularity)	suter with tyrosine

[Ref.: #69475]	Multicellular complex forming ability	yes
[Ref.: #69475]	Multicellular complex name	Aerial mycelium
[Ref.: #69475]	Multicellular complex color	Signal white (9003)
[Ref.: #69475]	Medium Name (multicellularity)	suter without tyrosine

Multimedia content

[Ref.: #64478]

Caption:

Medium 514 28°C

[Ref.: #64478]

Intellectual property rights:

Information on culture and growth conditions Culture and growth conditions

[Ref.: #64478]

Culture medium

BACTO MARINE BROTH (DIFCO 2216) (DSMZ Medium 514)

[Ref.: #64478]

Culture medium growth

[Ref.: #64478]

Culture medium link

Medium recipe at MediaDive

[Ref.: #64478]

Culture medium composition

expand / minimize

[Ref.: #64478]

Culture medium

TRYPTICASE SOY BROTH AGAR (DSMZ Medium 535)

[Ref.: #64478]

Culture medium growth

[Ref.: #64478]

Culture medium link

Medium recipe provided by DSMZ

	Temperatures	Kind of temperature		Temperature
[Ref.: #64478]			growth	28 °C
[Ref.: #68011]			growth	6.0-12.0 °C

[Ref.: #64478]	Temperature range	mesophilic
[Ref.: #68011]	Temperature range	psychrophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #68011]

Oxygen tolerance

aerobe

[Ref.: #68011]	Spore description	rod-shaped spores, smooth surface, 0.6 µm wide and 1.1 µm long
[Ref.: #68011]	Type of spore	spore
[Ref.: #68011]	Ability of spore formation	yes

	Salt		Salt conc.
[Ref.: #68011]	NaCl	growth	0.0-8.0	%
[Ref.: #68011]	NaCl	optimum	0.0-4.0	%
[Ref.: #69475]	NaCl	growth	0-2.5	%

[Ref.: #68011]	Observation	Substrate mycelia are straight without fragmentation. Aerial mycelia are yellow to white, branching and not fragmented
[Ref.: #68011]	Observation	The polar lipid profile mainly consists of diphosphatidylglycerol, phosphatidylcholine, phosphatidylethanolamine, phosphatidylglycerol and phosphatidyl-N-methylethanolamine, with additional unknown polar lipids and glycolipids
[Ref.: #68011]	Observation	Predominant menaquinones are MK-11(H2), MK-10(H2), MK-11(H4) and MK-10(H4)
[Ref.: #68011]	Observation	Meso-DAP is present in cell-wall hydrolysates, with glucose and ribose as the characteristic sugars
[Ref.: #68011]	Observation	moderately thermotolerant
[Ref.: #68011]	Observation	increase in production of blue diffusible pigment was observed on SBM agar and ISP2

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #68011]	adenine ChEBI	+	hydrolysis
[Ref.: #68011]	amylose ChEBI	+	carbon source
[Ref.: #69475]	arabinose ChEBI	+	growth
[Ref.: #68011]	casein	+	hydrolysis
[Ref.: #68011]	cellulose ChEBI	+	carbon source
[Ref.: #69475]	cellulose ChEBI	-	growth
[Ref.: #68011]	citrate ChEBI	-	carbon source
[Ref.: #68011]	D-fructose ChEBI	+	carbon source
[Ref.: #68011]	D-glucose ChEBI	+	carbon source
[Ref.: #68379]	D-glucose ChEBI	-	fermentation	* from API Coryne
[Ref.: #68011]	D-mannitol ChEBI	+	carbon source
[Ref.: #68379]	D-mannitol ChEBI	-	fermentation	* from API Coryne
[Ref.: #68011]	D-mannose ChEBI	+	carbon source
[Ref.: #68379]	D-ribose ChEBI	-	fermentation	* from API Coryne
[Ref.: #68011]	D-sorbitol ChEBI	+	carbon source
[Ref.: #68379]	D-xylose ChEBI	-	fermentation	* from API Coryne
[Ref.: #68379]	esculin ChEBI	-	hydrolysis	* from API Coryne
[Ref.: #69475]	fructose ChEBI	-	growth
[Ref.: #68011]	gelatin ChEBI	+	hydrolysis
[Ref.: #68379]	gelatin ChEBI	+	hydrolysis	* from API Coryne
[Ref.: #69475]	glucose ChEBI	+	growth
[Ref.: #68011]	glycerol ChEBI	+	carbon source
[Ref.: #68379]	glycogen ChEBI	-	fermentation	* from API Coryne
[Ref.: #69475]	inositol ChEBI	+	growth
[Ref.: #68011]	L-arabinose ChEBI	+	carbon source
[Ref.: #68011]	L-arabinose ChEBI	+	builds acid from
[Ref.: #68011]	L-rhamnose ChEBI	+	carbon source
[Ref.: #68011]	lactose ChEBI	+	carbon source
[Ref.: #68379]	lactose ChEBI	-	fermentation	* from API Coryne
[Ref.: #68011]	maltose ChEBI	+	carbon source
[Ref.: #68379]	maltose ChEBI	-	fermentation	* from API Coryne
[Ref.: #69475]	mannose ChEBI	-	growth
[Ref.: #68011]	melezitose ChEBI	+	carbon source
[Ref.: #68011]	melibiose ChEBI	+	carbon source
[Ref.: #68011]	milk	-	assimilation
[Ref.: #68011]	myo-inositol ChEBI	+	carbon source
[Ref.: #68011]	nitrate ChEBI	-	reduction
[Ref.: #68379]	nitrate ChEBI	-	reduction	* from API Coryne
[Ref.: #68011]	raffinose ChEBI	+	carbon source
[Ref.: #69475]	raffinose ChEBI	-	growth
[Ref.: #69475]	rhamnose ChEBI	+	growth
[Ref.: #68011]	ribitol ChEBI	+	carbon source
[Ref.: #68011]	starch ChEBI	+	hydrolysis
[Ref.: #68011]	sucrose ChEBI	+	carbon source
[Ref.: #68011]	sucrose ChEBI	+	builds acid from
[Ref.: #69475]	sucrose ChEBI	+	growth
[Ref.: #68379]	sucrose ChEBI	-	fermentation	* from API Coryne
[Ref.: #68011]	trehalose ChEBI	+	carbon source
[Ref.: #68011]	trehalose ChEBI	+	builds acid from
[Ref.: #68011]	tween 80 ChEBI	-	hydrolysis
[Ref.: #68379]	urea ChEBI	-	hydrolysis	* from API Coryne
[Ref.: #68011]	xylose ChEBI	+	carbon source
[Ref.: #69475]	xylose ChEBI	+	growth
	Only first 10 entries are displayed. Click here to see all.

	Enzyme	Enzyme activity	EC number
[Ref.: #68382]	acid phosphatase	+	3.1.3.2	* from API zym
[Ref.: #68379]	alkaline phosphatase	+	3.1.3.1	* from API Coryne, API zym
[Ref.: #68382]	alpha-chymotrypsin	+	3.4.21.1	* from API zym
[Ref.: #68382]	alpha-fucosidase	-	3.2.1.51	* from API zym
[Ref.: #68379]	alpha-glucosidase	-	3.2.1.20	* from API Coryne
[Ref.: #68382]	alpha-mannosidase	-	3.2.1.24	* from API zym
[Ref.: #68379]	beta-galactosidase	-	3.2.1.23	* from API Coryne, API zym
[Ref.: #68379]	beta-glucosidase	-	3.2.1.21	* from API Coryne, API zym
[Ref.: #68379]	beta-glucuronidase	-	3.2.1.31	* from API Coryne, API zym
[Ref.: #68011]	catalase	+	1.11.1.6
[Ref.: #68382]	cystine arylamidase	-	3.4.11.3	* from API zym
[Ref.: #68011]	cytochrome oxidase	+	1.9.3.1
[Ref.: #68382]	esterase (C 4)	+		* from API zym
[Ref.: #68379]	gelatinase	+		* from API Coryne
[Ref.: #68382]	leucine arylamidase	+	3.4.11.1	* from API zym
[Ref.: #68382]	lipase (C 14)	+		* from API zym
[Ref.: #68379]	N-acetyl-beta-glucosaminidase	-	3.2.1.52	* from API Coryne
[Ref.: #68379]	pyrazinamidase	-	3.5.1.B15	* from API Coryne
[Ref.: #68379]	pyrrolidonyl arylamidase	-	3.4.19.3	* from API Coryne
[Ref.: #68011]	urease	+	3.5.1.5
[Ref.: #68379]	urease	-	3.5.1.5	* from API Coryne
	Only first 10 entries are displayed. Click here to see all.

API® Coryne:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Reduction of nitrateNIT	PyrazinamidasePYZ	Pyrrolidonyl arylamidasePYRA	Alkaline phosphatasePAL	beta-Glucuronidasebeta GUR	beta-Galactosidasebeta GAL	alpha-Glucosidasealpha GLU	N-Acetyl-beta-Glucosidasebeta NAG	Esculin hydrolysis/beta-GlucosidaseESC	Urease/urea hydrolysisURE	Gelatinase/gelatin hydrolysisGEL	Control fermentationControl	Fermentation of D-glucoseGLU	Fermentation of D-riboseRIB	Fermentation of D-xyloseXYL	Fermentation of D-mannitolMAN	Fermentation of maltoseMAL	Fermentation of lactoseLAC	Fermentation of sucroseSAC	Fermentation of glycogenGLYG	CatalaseCAT
[Ref.: #69475]	3968	-	-	-	+	-	-	-	-	-	-	+	not determinedn.d.	-	-	-	-	-	-	-	-	not determinedn.d.

API® zym:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Control	2-naphthyl phosphateAlkaline phosphatase	2-naphthyl butyrateEsterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	2-naphthyl myristateLipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	N-benzoyl-DL-arginine-2-naphthylamideTrypsin	N-glutaryl-phenylalanine-2-naphthylamidealpha- Chymotrypsin	2-naphthyl phosphateAcid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	6-Br-2-naphthyl-alphaD-galactpyranosidealpha- Galactosidase	2-naphthyl-betaD-galactpyranosidebeta- Galactosidase	Naphthol-AS-BI-betaD-glucuronidebeta- Glucuronidase	2-naphthyl-alphaD-glucopyranosidealpha- Glucosidase	6-Br-2-naphthyl-betaD-glucopyranosidebeta- Glucosidase	1-naphthyl-N-acetyl-betaD-glucosaminideN-acetyl-beta- glucosaminidase	6-Br-2-naphthyl-alphaD-mannopyranosidealpha- Mannosidase	2-naphthyl-alphaL-fucopyranosidealpha- Fucosidase
[Ref.: #69475]	6152	not determinedn.d.	+	+	+/-	+	+	+/-	-	+/-	+	+	+/-	+/-	-	-	+/-	-	+/-	-	-

	Pathway	Enzyme coverage	Annotated reactions
	Pathway annotation	Computationally determined by
[Ref.: #66794]	cellulose degradation	100	5 of 5
[Ref.: #66794]	cis-vaccenate biosynthesis	100	2 of 2
[Ref.: #66794]	suberin monomers biosynthesis	100	2 of 2
[Ref.: #66794]	adipate degradation	100	2 of 2
[Ref.: #66794]	vitamin K metabolism	100	5 of 5
[Ref.: #66794]	enterobactin biosynthesis	100	3 of 3
[Ref.: #66794]	cyanate degradation	100	3 of 3
[Ref.: #66794]	starch degradation	100	10 of 10
[Ref.: #66794]	UDP-GlcNAc biosynthesis	100	3 of 3
[Ref.: #66794]	aclacinomycin biosynthesis	100	7 of 7
[Ref.: #66794]	CDP-diacylglycerol biosynthesis	100	2 of 2
[Ref.: #66794]	glycogen metabolism	100	5 of 5
[Ref.: #66794]	coenzyme A metabolism	100	4 of 4
[Ref.: #66794]	formaldehyde oxidation	100	3 of 3
[Ref.: #66794]	cardiolipin biosynthesis	100	7 of 7
[Ref.: #66794]	reductive acetyl coenzyme A pathway	100	7 of 7
[Ref.: #66794]	palmitate biosynthesis	100	22 of 22
[Ref.: #66794]	acetate fermentation	100	4 of 4
[Ref.: #66794]	folate polyglutamylation	100	1 of 1
[Ref.: #66794]	anapleurotic synthesis of oxalacetate	100	1 of 1
[Ref.: #66794]	aspartate and asparagine metabolism	100	9 of 9
[Ref.: #66794]	threonine metabolism	100	10 of 10
[Ref.: #66794]	methylglyoxal degradation	100	5 of 5
[Ref.: #66794]	molybdenum cofactor biosynthesis	100	9 of 9
[Ref.: #66794]	phenylacetate degradation (aerobic)	100	5 of 5
[Ref.: #66794]	ppGpp biosynthesis	100	4 of 4
[Ref.: #66794]	glycolate and glyoxylate degradation	100	6 of 6
[Ref.: #66794]	aerobactin biosynthesis	100	1 of 1
[Ref.: #66794]	kanosamine biosynthesis II	100	2 of 2
[Ref.: #66794]	phenylalanine metabolism	92.31	12 of 13
[Ref.: #66794]	pentose phosphate pathway	90.91	10 of 11
[Ref.: #66794]	myo-inositol biosynthesis	90	9 of 10
[Ref.: #66794]	Entner Doudoroff pathway	90	9 of 10
[Ref.: #66794]	chorismate metabolism	88.89	8 of 9
[Ref.: #66794]	CO2 fixation in Crenarchaeota	88.89	8 of 9
[Ref.: #66794]	serine metabolism	88.89	8 of 9
[Ref.: #66794]	purine metabolism	88.3	83 of 94
[Ref.: #66794]	C4 and CAM-carbon fixation	87.5	7 of 8
[Ref.: #66794]	dTDPLrhamnose biosynthesis	87.5	7 of 8
[Ref.: #66794]	flavin biosynthesis	86.67	13 of 15
[Ref.: #66794]	peptidoglycan biosynthesis	86.67	13 of 15
[Ref.: #66794]	photosynthesis	85.71	12 of 14
[Ref.: #66794]	propanol degradation	85.71	6 of 7
[Ref.: #66794]	citric acid cycle	85.71	12 of 14
[Ref.: #66794]	tetrahydrofolate metabolism	85.71	12 of 14
[Ref.: #66794]	leucine metabolism	84.62	11 of 13
[Ref.: #66794]	urea cycle	84.62	11 of 13
[Ref.: #66794]	glycolysis	82.35	14 of 17
[Ref.: #66794]	3-chlorocatechol degradation	80	4 of 5
[Ref.: #66794]	glycine betaine biosynthesis	80	4 of 5
[Ref.: #66794]	metabolism of amino sugars and derivatives	80	4 of 5
[Ref.: #66794]	propionate fermentation	80	8 of 10
[Ref.: #66794]	factor 420 biosynthesis	80	4 of 5
[Ref.: #66794]	D-cycloserine biosynthesis	80	4 of 5
[Ref.: #66794]	vitamin B12 metabolism	79.41	27 of 34
[Ref.: #66794]	histidine metabolism	79.31	23 of 29
[Ref.: #66794]	glutathione metabolism	78.57	11 of 14
[Ref.: #66794]	heme metabolism	78.57	11 of 14
[Ref.: #66794]	glutamate and glutamine metabolism	78.57	22 of 28
[Ref.: #66794]	allantoin degradation	77.78	7 of 9
[Ref.: #66794]	valine metabolism	77.78	7 of 9
[Ref.: #66794]	NAD metabolism	77.78	14 of 18
[Ref.: #66794]	pyrimidine metabolism	77.78	35 of 45
[Ref.: #66794]	vitamin B1 metabolism	76.92	10 of 13
[Ref.: #66794]	isoleucine metabolism	75	6 of 8
[Ref.: #66794]	glycogen biosynthesis	75	3 of 4
[Ref.: #66794]	6-hydroxymethyl-dihydropterin diphosphate biosynthesis	75	6 of 8
[Ref.: #66794]	butanoate fermentation	75	3 of 4
[Ref.: #66794]	ketogluconate metabolism	75	6 of 8
[Ref.: #66794]	gluconeogenesis	75	6 of 8
[Ref.: #66794]	sulfopterin metabolism	75	3 of 4
[Ref.: #66794]	CMP-KDO biosynthesis	75	3 of 4
[Ref.: #66794]	tryptophan metabolism	73.68	28 of 38
[Ref.: #66794]	proline metabolism	72.73	8 of 11
[Ref.: #66794]	alanine metabolism	72.41	21 of 29
[Ref.: #66794]	degradation of sugar acids	72	18 of 25
[Ref.: #66794]	ubiquinone biosynthesis	71.43	5 of 7
[Ref.: #66794]	lipid metabolism	70.97	22 of 31
[Ref.: #66794]	arginine metabolism	70.83	17 of 24
[Ref.: #66794]	degradation of sugar alcohols	68.75	11 of 16
[Ref.: #66794]	non-pathway related	68.42	26 of 38
[Ref.: #66794]	oxidative phosphorylation	68.13	62 of 91
[Ref.: #66794]	degradation of pentoses	67.86	19 of 28
[Ref.: #66794]	degradation of hexoses	66.67	12 of 18
[Ref.: #66794]	octane oxidation	66.67	2 of 3
[Ref.: #66794]	methane metabolism	66.67	2 of 3
[Ref.: #66794]	acetoin degradation	66.67	2 of 3
[Ref.: #66794]	L-lactaldehyde degradation	66.67	2 of 3
[Ref.: #66794]	cysteine metabolism	66.67	12 of 18
[Ref.: #66794]	sulfoquinovose degradation	66.67	2 of 3
[Ref.: #66794]	d-mannose degradation	66.67	6 of 9
[Ref.: #66794]	lysine metabolism	66.67	28 of 42
[Ref.: #66794]	methionine metabolism	65.38	17 of 26
[Ref.: #66794]	isoprenoid biosynthesis	65.38	17 of 26
[Ref.: #66794]	tyrosine metabolism	64.29	9 of 14
[Ref.: #66794]	d-xylose degradation	63.64	7 of 11
[Ref.: #66794]	vitamin B6 metabolism	63.64	7 of 11
[Ref.: #66794]	metabolism of disaccharids	63.64	7 of 11
[Ref.: #66794]	gallate degradation	60	3 of 5
[Ref.: #66794]	lipoate biosynthesis	60	3 of 5
[Ref.: #66794]	4-hydroxymandelate degradation	55.56	5 of 9
[Ref.: #66794]	daunorubicin biosynthesis	55.56	5 of 9
[Ref.: #66794]	carotenoid biosynthesis	54.55	12 of 22
[Ref.: #66794]	polyamine pathway	52.17	12 of 23
[Ref.: #66794]	quinate degradation	50	1 of 2
[Ref.: #66794]	cyclohexanol degradation	50	2 of 4
[Ref.: #66794]	4-hydroxyphenylacetate degradation	50	5 of 10
[Ref.: #66794]	aminopropanol phosphate biosynthesis	50	1 of 2
[Ref.: #66794]	ribulose monophosphate pathway	50	1 of 2
[Ref.: #66794]	pantothenate biosynthesis	50	3 of 6
[Ref.: #66794]	glycine metabolism	50	5 of 10
[Ref.: #66794]	ascorbate metabolism	50	11 of 22
[Ref.: #66794]	ethanol fermentation	50	1 of 2
[Ref.: #66794]	vitamin E metabolism	50	2 of 4
[Ref.: #66794]	degradation of aromatic, nitrogen containing compounds	50	6 of 12
[Ref.: #66794]	phenylmercury acetate degradation	50	1 of 2
[Ref.: #66794]	androgen and estrogen metabolism	50	8 of 16
[Ref.: #66794]	lactate fermentation	50	2 of 4
[Ref.: #66794]	mannosylglycerate biosynthesis	50	1 of 2
[Ref.: #66794]	bile acid biosynthesis, neutral pathway	47.06	8 of 17
[Ref.: #66794]	3-phenylpropionate degradation	46.67	7 of 15
[Ref.: #66794]	phosphatidylethanolamine bioynthesis	46.15	6 of 13
[Ref.: #66794]	phenylpropanoid biosynthesis	46.15	6 of 13
[Ref.: #66794]	phenol degradation	45	9 of 20
[Ref.: #66794]	nitrate assimilation	44.44	4 of 9
[Ref.: #66794]	lipid A biosynthesis	44.44	4 of 9
[Ref.: #66794]	hydrogen production	40	2 of 5
[Ref.: #66794]	arachidonate biosynthesis	40	2 of 5
[Ref.: #66794]	coenzyme M biosynthesis	40	4 of 10
[Ref.: #66794]	ethylmalonyl-CoA pathway	40	2 of 5
[Ref.: #66794]	carnitine metabolism	37.5	3 of 8
[Ref.: #66794]	1,4-dihydroxy-6-naphthoate biosynthesis	33.33	2 of 6
[Ref.: #66794]	selenocysteine biosynthesis	33.33	2 of 6
[Ref.: #66794]	acetyl CoA biosynthesis	33.33	1 of 3
[Ref.: #66794]	IAA biosynthesis	33.33	1 of 3
[Ref.: #66794]	sphingosine metabolism	33.33	2 of 6
[Ref.: #66794]	(5R)-carbapenem carboxylate biosynthesis	33.33	1 of 3
[Ref.: #66794]	arachidonic acid metabolism	33.33	6 of 18
[Ref.: #66794]	chlorophyll metabolism	33.33	6 of 18
[Ref.: #66794]	sulfate reduction	30.77	4 of 13
[Ref.: #66794]	benzoyl-CoA degradation	28.57	2 of 7
[Ref.: #66794]	cholesterol biosynthesis	27.27	3 of 11
[Ref.: #66794]	methanogenesis from CO2	25	3 of 12
[Ref.: #66794]	toluene degradation	25	1 of 4
[Ref.: #66794]	biotin biosynthesis	25	1 of 4
[Ref.: #66794]	catecholamine biosynthesis	25	1 of 4
		Only first 10 entries are displayed. Click here to see all.

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #64478]	Sample type/isolated from	Marine sediments collected at a 7 m depth
[Ref.: #64478]	Geographic location (country and/or sea, region)	Pahang, Tioman Island, Pirate Reef
[Ref.: #64478]	Country	Malaysia
[Ref.: #64478]	Country ISO 3 Code	MYS
[Ref.: #64478]	Continent	Asia

[Ref.: #68011]	Sample type/isolated from	marine sediment in a depth of 7m from the Pirate Reef
[Ref.: #68011]	Sampling date	2013-03-13
[Ref.: #68011]	Geographic location (country and/or sea, region)	Tioman Island, Pahang
[Ref.: #68011]	Country	Malaysia
[Ref.: #68011]	Country ISO 3 Code	MYS
[Ref.: #68011]	Continent	Asia
[Ref.: #68011]	Geographic location	2.8242°/104.1570°
* marker position based on {}

Isolation sources categories

#Environmental	#Aquatic	#Marine
#Environmental	#Aquatic	#Sediment

What are isolation sources categories?

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #64478]	Marinitenerispora sediminis strain TPS16 16S ribosomal RNA gene, partial sequence	KM273125	1373	ENA	1931232 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #68011]	Marinitenerispora sediminis TPS16	GCA_003336425	contig	GenBank	1931232 tax ID
[Ref.: #66792]	Marinitenerispora sediminis TPS16	2852029117	draft	JGI IMG/M	1931232 tax ID	*

[Ref.: #68011]

GC-content

73.8 mol%

genome sequence analysis

Availability in culture collections External links

[Ref.: #64478]

Culture collection no.

DSM 46825, TBRC 5138

[Ref.: #110758]

SI-ID 405376

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Marinitenerispora sediminis gen. nov., sp. nov., a member of the family Nocardiopsaceae isolated from marine sediment.	Ng ZY, Fang BZ, Li WJ, Tan GYA	Int J Syst Evol Microbiol	10.1099/ijsem.0.003587	2019	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#64478

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 46825

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#66794

Antje Chang, Lisa Jeske, Sandra Ulbrich, Julia Hofmann, Julia Koblitz, Ida Schomburg, Meina Neumann-Schaal, Dieter Jahn, Dietmar Schomburg: BRENDA, the ELIXIR core data resource in 2021: new developments and updates. Nucleic Acids Res. 49: D498 - D508 2020 ( DOI 10.1093/nar/gkaa1025 , PubMed 33211880 )

#68011

Zoe Yi Ng, Bao-Zhu Fang, Wen-Jun Li, Geok Yuan Annie Tan: Marinitenerispora sediminis gen. nov., sp. nov., a member of the family Nocardiopsaceae isolated from marine sediment. IJSEM 69: 3031 - 3040 2019 ( DOI 10.1099/ijsem.0.003587 )

#68379

Automatically annotated from API Coryne .

#68382

Automatically annotated from API zym .

#69475

Wink, J.: Compendium of Actinobacteria. HZI-Helmholtz-Centre for Infection Research, Braunschweig .

#110758

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID405376.1 )

* These data were automatically processed and therefore are not curated

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