Vibrio eleionomae (DSM 24596, CAIM 722, SW9)

Name: Vibrio eleionomae (DSM 24596, CAIM 722, SW9)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 157897

Type strain

Strain Designation SW9

Culture col. no. DSM 24596 CAIM 722 SW9

NCBI tax ID(s) 2653505 678

Special Collections DSMZ

Links

Vibrio eleionomae SW9 is a mesophilic prokaryote that was isolated from water from shrimp pond .

mesophilic genome sequence 16S sequence

Name and taxonomic classification

SI-ID 400439

CAIM-722,DSM 24596

@ref 20215

Last LPSN update 2025-12-16 10:07:54

Domain Pseudomonadati

Phylum Pseudomonadota

Class Gammaproteobacteria

Order "Vibrionales"

Family Vibrionaceae

Genus Vibrio

Species Vibrio eleionomae

Full scientific name Vibrio eleionomae Enciso-Ibarra et al. 2023

Morphology

Cell morphology

@ref	Gram stain	Confidence
125438	negative	99
125439	negative	99.4

Multimedia

@ref:	64470
multimedia content:	DSM_24596.jpg
multimedia.multimedia content:	https://www.dsmz.de/microorganisms/photos/DSM_24596.jpg
intellectual property rights:	© Leibniz-Institut DSMZ
manual_annotation:	1

Culture and growth conditions

Culture medium

@ref	Name	Growth	Medium link	Composition
64470	BACTO MARINE BROTH (DIFCO 2216) (DSMZ Medium 514)		Medium recipe at MediaDive	Name: BACTO MARINE BROTH (DIFCO 2216) (DSMZ Medium 514) Composition: NaCl 19.45 g/l MgCl2 5.9 g/l Bacto peptone 5.0 g/l Na2SO4 3.24 g/l CaCl2 1.8 g/l Yeast extract 1.0 g/l KCl 0.55 g/l NaHCO3 0.16 g/l Fe(III) citrate 0.1 g/l KBr 0.08 g/l SrCl2 0.034 g/l H3BO3 0.022 g/l Na2HPO4 0.008 g/l Na-silicate 0.004 g/l NaF 0.0024 g/l (NH4)NO3 0.0016 g/l Distilled water

Culture temp

@ref	Growth	Type	Temperature (°C)	Range
64470	positive	growth	28	mesophilic

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
125439	obligate aerobe	98.9

Spore formation

@ref	Spore formation	Confidence
125439		99.6

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Engineered	#Food production	#Aquaculture
#Host	#Arthropoda	#Crustacea
#Environmental	#Aquatic	#Pond (small)

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent
64470	water from shrimp pond (Litopenaeus sp.)	Sinaloa, Los Mochis, Acu	Mexico	MEX	North America

Interaction and safety

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
66792	ASM987454v1 assembly for Vibrio eleionomae CAIM 722	contig	GCA_009874545	2653505.3	8022458645	2653505	48.97

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
124043	Vibrio sp. CAIM 722 16S ribosomal RNA gene, partial sequence.	ON406572	1528		2653505

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: Vibrio eleionomae CAIM 722
NCBI: GCA_009874545

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	spore_formation	BacteriaNetⓘ	no	99.60	no
125439	motility	BacteriaNetⓘ	yes	79.80	no
125439	gram_stain	BacteriaNetⓘ	negative	99.40	no
125439	oxygen_tolerance	BacteriaNetⓘ	obligate aerobe	98.90	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Vibrio sp. CAIM 722
PATRIC: 2653505.3

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	no	99.00	no
125438	anaerobic	anaerobicⓘ	no	93.26	no
125438	spore-forming	spore-formingⓘ	no	82.75	no
125438	aerobic	aerobicⓘ	no	64.21	no
125438	thermophilic	thermophileⓘ	no	97.50	no
125438	flagellated	motile2+ⓘ	yes	89.74	no

Literature

Title	Authors	Journal	DOI	Year
Vibrio eleionomae sp. nov., isolated from shrimp (Penaeus vannamei) pond water.	Enciso-Ibarra J, Roque A, Bolan-Mejia C, Enciso-Ibarra K, Gonzalez-Castillo A, Gomez-Gil B.	Int J Syst Evol Microbiol	10.1099/ijsem.0.005866	2023

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#64470	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 24596
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#124043	Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy .
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

Rate our new design

Content

About us

Vibrio eleionomae (DSM 24596, CAIM 722, SW9)

Name and taxonomic classification

Morphology

Cell morphology

Multimedia

Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Oxygen tolerance

Spore formation

Isolation, sampling and environmental information

Isolation source categories

Isolation

Interaction and safety

Sequence information

Genome sequences

Genome browser: GCA_009874545

16S sequences

Genome-based predictions

Predictions

Literature

Literature

References

BacDive

Help

Social Media