Bifidobacterium parmae (CCUG 70964, LMG 30295, JCM 32706)

Name: Bifidobacterium parmae (CCUG 70964, LMG 30295, JCM 32706)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 157233

Type strain

Culture col. no. CCUG 70964 LMG 30295 JCM 32706

NCBI tax ID(s) 361854

Special Collections CCUG JCM

History LMG 30295 <-- M. Ventura; Dept. of Chem., Univ. of Parma, Italy; Uis4E.

Links

Bifidobacterium parmae CCUG 70964 is an anaerobe bacterium that was isolated from Faeces,Callithrix pygmaea.

anaerobe genome sequence Bacteria

Name and taxonomic classification

SI-ID 410384

LMG 30295,JCM 32706,CCUG 70964

@ref 20215

Last LPSN update 2026-02-09 11:38:01

Domain Bacteria

Phylum Actinomycetota

Class Actinomycetes

Order Bifidobacteriales

Family Bifidobacteriaceae

Genus Bifidobacterium

Species Bifidobacterium parmae

Full scientific name Bifidobacterium parmae Lugli et al. 2018

Morphology

Cell morphology

@ref	Motility	Confidence
125438		92

Colony morphology

63773

Incubation period2 days

Culture and growth conditions

Culture temp

@ref	Growth	Type	Temperature (°C)
63773	positive	growth	37
67770	positive	growth	37

Physiology and metabolism

Oxygen tolerance

63773

Oxygen toleranceanaerobe

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Host	#Mammals	#Primates
#Host Body Product	#Gastrointestinal tract	#Feces (Stool)

Isolation

@ref	Sample type	Sampling date	Geographic location	Country	Country ISO 3 Code	Continent	Host species
63773	Faeces,Callithrix pygmaea	2014-09-14	Emilia Romagna,Parma	Italy	ITA	Europe
67770	Stool sample of a pygmy marmoset (Callithrix pygmaea)			Italy	ITA	Europe	Callithrix pygmaea

Interaction and safety

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
67770	ASM286036v1 assembly for Bifidobacterium parmae Uis4E	contig	GCA_002860365	361854.6	2791355247	361854	69.44

GC content

67770

GC-content (mol%)65.81

Genome-based predictions

Predictions

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Bifidobacterium parmae Uis4E
NCBI: GCA_002860365.1

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	yes	86.31	no
125438	anaerobic	anaerobicⓘ	yes	77.51	no
125438	aerobic	aerobicⓘ	no	88.29	no
125438	spore-forming	spore-formingⓘ	no	84.83	no
125438	thermophilic	thermophileⓘ	no	90.99	yes
125438	flagellated	motile2+ⓘ	no	92.00	no

Literature

Topic	Title	Authors	Journal	DOI	Year
	Genetic insights into the dark matter of the mammalian gut microbiota through targeted genome reconstruction.	Lugli GA, Alessandri G, Milani C, Viappiani A, Fontana F, Tarracchini C, Mancabelli L, Argentini C, Ruiz L, Margolles A, van Sinderen D, Turroni F, Ventura M.	Environ Microbiol	10.1111/1462-2920.15559	2021
Genetics	Mobilome and Resistome Reconstruction from Genomes Belonging to Members of the Bifidobacterium Genus.	Mancino W, Lugli GA, Sinderen DV, Ventura M, Turroni F.	Microorganisms	10.3390/microorganisms7120638	2019
Phylogeny	Phylogenetic classification of six novel species belonging to the genus Bifidobacterium comprising Bifidobacterium anseris sp. nov., Bifidobacterium criceti sp. nov., Bifidobacterium imperatoris sp. nov., Bifidobacterium italicum sp. nov., Bifidobacterium margollesii sp. nov. and Bifidobacterium parmae sp. nov.	Lugli GA, Mangifesta M, Duranti S, Anzalone R, Milani C, Mancabelli L, Alessandri G, Turroni F, Ossiprandi MC, van Sinderen D, Ventura M	Syst Appl Microbiol	10.1016/j.syapm.2018.01.002	2018

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#63773	Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 70964
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Bifidobacterium parmae (CCUG 70964, LMG 30295, JCM 32706)

Name and taxonomic classification

Morphology

Cell morphology

Colony morphology

Culture and growth conditions

Culture temp

Physiology and metabolism

Oxygen tolerance

Isolation, sampling and environmental information

Isolation source categories

Isolation

Interaction and safety

Sequence information

Genome sequences

Genome browser: GCA_002860365

GC content

Genome-based predictions

Predictions

Literature

Literature

References

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