Name: Elizabethkingia ursingii G4122
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 157086

Type strain:

Species: Elizabethkingia ursingii

Strain Designation: G4122

Culture col. no.: CIP 111192, DSM 2974, CCUG 69496, DSM 103688

Strain history: CIP <- 2016, CCUG <- 2016, A. Nicholson, CDC, Atlanta, Georgia, USA: strain G4122

NCBI tax ID(s): 1756150 (species)

SI-ID 399092

DSM 103688, CCUG 69496, CIP 111192

Other strains from Elizabethkingia ursingii

E. ursingii CCUG 69498
E. ursingii CCUG 69517

Section

Elizabethkingia ursingii G4122 is an aerobe, mesophilic bacterium that was isolated from Soil.

aerobe
mesophilic
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacteroidota*
	Class	*Flavobacteriia*
	Order	*Flavobacteriales*
	Family	*Weeksellaceae*
	Genus	*Elizabethkingia*
	Species	**Elizabethkingia ursingii**
	Full Scientific Name (LPSN)	Elizabethkingia ursingii Nicholson et al. 2019

Information on morphological and physiological properties Morphology

[Ref.: #123761]	Motility	no

Information on culture and growth conditions Culture and growth conditions

[Ref.: #69051]

Culture medium

R2A MEDIUM (DSMZ Medium 830)

[Ref.: #69051]

Culture medium growth

[Ref.: #69051]

Culture medium link

Medium recipe provided by DSMZ

[Ref.: #69051]

Culture medium

OXOID NUTRIENT BROTH (DSMZ Medium 948)

[Ref.: #69051]

Culture medium growth

[Ref.: #69051]

Culture medium link

Medium recipe provided by DSMZ

[Ref.: #69051]

Culture medium

NUTRIENT AGAR (DSMZ Medium 1)

[Ref.: #69051]

Culture medium growth

[Ref.: #69051]

Culture medium link

Medium recipe provided by DSMZ

[Ref.: #123761]

Culture medium

CIP Medium 72

[Ref.: #123761]

Culture medium growth

[Ref.: #123761]

Culture medium link

Medium recipe provided by DSMZ

	Temperatures	Kind of temperature		Temperature
[Ref.: #63589]			growth	30 °C
[Ref.: #69051]			growth	37 °C

[Ref.: #63589]	Temperature range	mesophilic
[Ref.: #69051]	Temperature range	mesophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #63589]

Oxygen tolerance

aerobe

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #63589]	Sample type/isolated from	Soil
[Ref.: #63589]	Sampling date	1964
[Ref.: #63589]	Geographic location (country and/or sea, region)	Odense
[Ref.: #63589]	Country	Denmark
[Ref.: #63589]	Country ISO 3 Code	DNK
[Ref.: #63589]	Continent	Europe

[Ref.: #123761]	Sample type/isolated from	Environment, Soil
[Ref.: #123761]	Geographic location (country and/or sea, region)	Odense
[Ref.: #123761]	Country	Denmark
[Ref.: #123761]	Country ISO 3 Code	DNK
[Ref.: #123761]	Continent	Europe
[Ref.: #123761]	Isolation date	1964
* marker position based on {}

Isolation sources categories

#Environmental

#Terrestrial

#Soil

What are isolation sources categories?

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #123761]

Biosafety level

Risk group (French classification)

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Elizabethkingia ursingii G4122	GCA_001521765	scaffold	GenBank	1756150 tax ID	*

[Ref.: #69051]

GC-content

35.6 mol%

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Elizabethkingia ursingii G4122 NCBI: GCA_001521765.1
[Ref.: #69480]	flagellated	no	95.388	no
[Ref.: #69480]	gram-positive	no	97.741	no
[Ref.: #69480]	anaerobic	no	99.728	yes
[Ref.: #69480]	aerobic	yes	91.61	yes
[Ref.: #69480]	halophile	no	94.398	no
[Ref.: #69480]	spore-forming	no	94.267	no
[Ref.: #69480]	glucose-util	yes	87.761	no
[Ref.: #69480]	motile	no	91.711	no
[Ref.: #69480]	thermophile	no	99.55	no
[Ref.: #69480]	glucose-ferment	no	91.48	no

Availability in culture collections External links

[Ref.: #63589]

Culture collection no.

CIP 111192, DSM 2974, CCUG 69496, DSM 103688

[Ref.: #110215]

SI-ID 399092

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Revisiting the taxonomy of the genus Elizabethkingia using whole-genome sequencing, optical mapping, and MALDI-TOF, along with proposal of three novel Elizabethkingia species: Elizabethkingia bruuniana sp. nov., Elizabethkingia ursingii sp. nov., and Elizabethkingia occulta sp. nov.	Nicholson AC, Gulvik CA, Whitney AM, Humrighouse BW, Graziano J, Emery B, Bell M, Loparev V, Juieng P, Gartin J, Bizet C, Clermont D, Criscuolo A, Brisse S, McQuiston JR	Antonie Van Leeuwenhoek	10.1007/s10482-017-0926-3	2017	*
Phylogeny	Elizabethkingia argenteiflava sp. nov., isolated from the pod of soybean, Glycine max.	Hwang JH, Kim J, Kim JH, Mo S	Int J Syst Evol Microbiol	10.1099/ijsem.0.004767	2021	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#63589 Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 69496

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69051

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 103688

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#110215

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID399092.1 )

#123761 Collection of Institut Pasteur ; Curators of the CIP; CIP 111192
* These data were automatically processed and therefore are not curated

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