Streptococcus pneumoniae CCUG 69382 is a microaerophile bacterium that was isolated from Human,blood.
microaerophile genome sequence 16S sequence Bacteria| @ref 20215 |
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| Domain Bacteria |
| Phylum Bacillota |
| Class Bacilli |
| Order Lactobacillales |
| Family Streptococcaceae |
| Genus Streptococcus |
| Species Streptococcus pneumoniae |
| Full scientific name Streptococcus pneumoniae (Klein 1884) Chester 1901 (Approved Lists 1980) |
| Synonyms (2) |
| @ref | Growth | Type | Temperature (°C) | |
|---|---|---|---|---|
| 63580 | positive | growth | 37 |
| Cat1 | Cat2 | Cat3 | |
|---|---|---|---|
| #Host | #Human | - | |
| #Host Body Product | #Fluids | #Blood | |
| #Infection | #Patient | - |
| @ref | Sample type | Sampling date | Geographic location | Country | Country ISO 3 Code | Continent | |
|---|---|---|---|---|---|---|---|
| 63580 | Human,blood | 1991 | Tennessee | USA | USA | North America |
| @ref | Description | Assembly level | INSDC accession | BV-BRC accession | NCBI tax ID | Score | |
|---|---|---|---|---|---|---|---|
| 66792 | ASM201411v1 assembly for Streptococcus pneumoniae CCUG 69382 | scaffold | 1313 | 63.17 |
| @ref | Description | Accession | Length | Database | NCBI tax ID | |
|---|---|---|---|---|---|---|
| 124043 | Streptococcus pneumoniae strain ATCC 51916 16S ribosomal RNA gene, partial sequence. | GU326245 | 1426 | 1313 |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125439 | spore_formation | BacteriaNetⓘ | no | 91.70 | no |
| 125439 | motility | BacteriaNetⓘ | no | 86.40 | no |
| 125439 | gram_stain | BacteriaNetⓘ | positive | 89.00 | no |
| 125439 | oxygen_tolerance | BacteriaNetⓘ | microaerophile | 99.00 | no |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125438 | gram-positive | gram-positiveⓘ | yes | 90.59 | no |
| 125438 | anaerobic | anaerobicⓘ | no | 89.87 | yes |
| 125438 | aerobic | aerobicⓘ | no | 97.76 | yes |
| 125438 | spore-forming | spore-formingⓘ | no | 83.88 | no |
| 125438 | thermophilic | thermophileⓘ | no | 95.00 | yes |
| 125438 | flagellated | motile2+ⓘ | no | 90.00 | no |
| Topic | Title | Authors | Journal | DOI | Year | |
|---|---|---|---|---|---|---|
| Genetics | A Pangenome Approach for Discerning Species-Unique Gene Markers for Identifications of Streptococcus pneumoniae and Streptococcus pseudopneumoniae. | Gonzales-Siles L, Karlsson R, Schmidt P, Salva-Serra F, Jaen-Luchoro D, Skovbjerg S, Moore ERB, Gomila M. | Front Cell Infect Microbiol | 10.3389/fcimb.2020.00222 | 2020 | |
| Antimicrobial proteins from oyster hemolymph improve the efficacy of conventional antibiotics. | Summer K, Guo Q, Liu L, Barkla B, Giles S, Benkendorff K. | PLoS One | 10.1371/journal.pone.0312305 | 2025 | ||
| Detection of Macrolide-Resistant Streptococcus pneumoniae Genes and Its Clinical Outcomes in a Tertiary Teaching Hospital in Malaysia. | Wan Mahmud WN, Hassan SA, Abd Rahman Z, Wan Abdul Wahab WNA, Ismail N. | Malays J Med Sci | 10.21315/mjms2024.31.2.17 | 2024 | ||
| Semi-purified Antimicrobial Proteins from Oyster Hemolymph Inhibit Pneumococcal Infection. | Summer K, Liu L, Guo Q, Barkla B, Benkendorff K. | Mar Biotechnol (NY) | 10.1007/s10126-024-10297-w | 2024 | ||
| Out of control: The need for standardised solvent approaches and data reporting in antibiofilm assays incorporating dimethyl-sulfoxide (DMSO). | Summer K, Browne J, Hollanders M, Benkendorff K. | Biofilm | 10.1016/j.bioflm.2022.100081 | 2022 | ||
| Thermostable Heptaplex PCR Assay for the Detection of Six Respiratory Bacterial Pathogens. | Nik Zuraina NMN, Goni MD, Amalina KN, Hasan H, Mohamad S, Suraiya S. | Diagnostics (Basel) | 10.3390/diagnostics11050753 | 2021 | ||
| Phenotypes and genotypes of macrolide-resistant streptococcus pneumoniae. | Sirekbasan L, Gonullu N, Sirekbasan S, Kuskucu M, Midilli K. | Balkan Med J | 10.5152/balkanmedj.2015.15169 | 2015 | ||
| Potent trifluoromethoxy, trifluoromethylsulfonyl, trifluoromethylthio and pentafluorosulfanyl containing (1,3,4-oxadiazol-2-yl)benzamides against drug-resistant Gram-positive bacteria. | Naclerio GA, Abutaleb NS, Onyedibe KI, Seleem MN, Sintim HO. | RSC Med Chem | 10.1039/c9md00391f | 2020 | ||
| Exploring novel aryl/heteroaryl-isosteres of phenylthiazole against multidrug-resistant bacteria. | Omara M, Hagras M, Elsebaie MM, Abutaleb NS, Nour El-Din HT, Mekhail MO, Attia AS, Seleem MN, Sarg MT, Mayhoub AS. | RSC Adv | 10.1039/d3ra02778c | 2023 | ||
| Diversity of Mosaic pbp2x Families in Penicillin-Resistant Streptococcus pneumoniae from Iran and Romania. | Mousavi SF, Pana M, Feizabadi M, Jalali P, Ghita M, Denapaite D, Hakenbeck R. | Antimicrob Agents Chemother | 10.1128/aac.01535-17 | 2017 | ||
| Pathogenicity | Commensal streptococci serve as a reservoir for beta-lactam resistance genes in Streptococcus pneumoniae. | Jensen A, Valdorsson O, Frimodt-Moller N, Hollingshead S, Kilian M. | Antimicrob Agents Chemother | 10.1128/aac.00429-15 | 2015 | |
| In vivo antibacterial activity of MRX-I, a new oxazolidinone. | Li CR, Zhai QQ, Wang XK, Hu XX, Li GQ, Zhang WX, Pang J, Lu X, Yuan H, Gordeev MF, Chen LT, Yang XY, You XF. | Antimicrob Agents Chemother | 10.1128/aac.01526-13 | 2014 | ||
| tert-Butylphenylthiazoles with an oxadiazole linker: a novel orally bioavailable class of antibiotics exhibiting antibiofilm activity. | Kotb A, Abutaleb NS, Hagras M, Bayoumi A, Moustafa MM, Ghiaty A, Seleem MN, Mayhoub AS. | RSC Adv | 10.1039/c8ra10525a | 2019 | ||
| Pathogenicity | Anthracimycin, a potent anthrax antibiotic from a marine-derived actinomycete. | Jang KH, Nam SJ, Locke JB, Kauffman CA, Beatty DS, Paul LA, Fenical W. | Angew Chem Int Ed Engl | 10.1002/anie.201302749 | 2013 | |
| Pathogenicity | Phenylthiazoles with tert-Butyl side chain: Metabolically stable with anti-biofilm activity. | Kotb A, Abutaleb NS, Seleem MA, Hagras M, Mohammad H, Bayoumi A, Ghiaty A, Seleem MN, Mayhoub AS. | Eur J Med Chem | 10.1016/j.ejmech.2018.03.044 | 2018 | |
| Pathogenicity | Heteroresistance to penicillin in Streptococcus pneumoniae. | Morand B, Muhlemann K. | Proc Natl Acad Sci U S A | 10.1073/pnas.0702377104 | 2007 | |
| Metabolism | The highly conserved serine threonine kinase StkP of Streptococcus pneumoniae contributes to penicillin susceptibility independently from genes encoding penicillin-binding proteins. | Dias R, Felix D, Canica M, Trombe MC. | BMC Microbiol | 10.1186/1471-2180-9-121 | 2009 | |
| Nomenclature of major antimicrobial-resistant clones of Streptococcus pneumoniae defined by the pneumococcal molecular epidemiology network. | McGee L, McDougal L, Zhou J, Spratt BG, Tenover FC, George R, Hakenbeck R, Hryniewicz W, Lefevre JC, Tomasz A, Klugman KP. | J Clin Microbiol | 10.1128/jcm.39.7.2565-2571.2001 | 2001 | ||
| Metabolism | Tricyclic GyrB/ParE (TriBE) inhibitors: a new class of broad-spectrum dual-targeting antibacterial agents. | Tari LW, Li X, Trzoss M, Bensen DC, Chen Z, Lam T, Zhang J, Lee SJ, Hough G, Phillipson D, Akers-Rodriguez S, Cunningham ML, Kwan BP, Nelson KJ, Castellano A, Locke JB, Brown-Driver V, Murphy TM, Ong VS, Pillar CM, Shinabarger DL, Nix J, Lightstone FC, Wong SE, Nguyen TB, Shaw KJ, Finn J. | PLoS One | 10.1371/journal.pone.0084409 | 2013 | |
| Phylogeny | Clonal groups of penicillin-nonsusceptible Streptococcus pneumoniae in Baltimore, Maryland: a population-based, molecular epidemiologic study. | McEllistrem MC, Pass M, Elliott JA, Whitney CG, Harrison LH. | J Clin Microbiol | 10.1128/jcm.38.12.4367-4372.2000 | 2000 | |
| Phylogeny | Pneumococcal pspA sequence types of prevalent multiresistant pneumococcal strains in the United States and of internationally disseminated clones. | Beall B, Gherardi G, Facklam RR, Hollingshead SK. | J Clin Microbiol | 10.1128/jcm.38.10.3663-3669.2000 | 2000 | |
| Pathogenicity | Genotypic survey of recent beta-lactam-resistant pneumococcal nasopharyngeal isolates from asymptomatic children in Chile. | Gherardi G, Inostrozo JS, O'Ryan M, Prado V, Prieto S, Arellano C, Facklam RR, Beall B. | J Clin Microbiol | 10.1128/jcm.37.11.3725-3730.1999 | 1999 | |
| Enzymology | Effect of dexamethasone on the efficacy of daptomycin in the therapy of experimental pneumococcal meningitis. | Vivas M, Force E, Tubau F, El Haj C, Ariza J, Cabellos C | Int J Antimicrob Agents | 10.1016/j.ijantimicag.2015.01.014 | 2015 | |
| Pathogenicity | Experimental study of the efficacy of daptomycin for the treatment of cephalosporin-resistant pneumococcal meningitis. | Vivas M, Force E, Garrigos C, Tubau F, Platteel AC, Ariza J, Cabellos C | J Antimicrob Chemother | 10.1093/jac/dku231 | 2014 | |
| Enzymology | Evaluation of fosfomycin alone and in combination with ceftriaxone or vancomycin in an experimental model of meningitis caused by two strains of cephalosporin-resistant Streptococcus pneumoniae. | Ribes S, Taberner F, Domenech A, Cabellos C, Tubau F, Linares J, Viladrich PF, Gudiol F | J Antimicrob Chemother | 10.1093/jac/dkl047 | 2006 | |
| Pathogenicity | Evaluation of ceftriaxone, vancomycin and rifampicin alone and combined in an experimental model of meningitis caused by highly cephalosporin-resistant Streptococcus pneumoniae ATCC 51916. | Ribes S, Taberner F, Domenech A, Cabellos C, Tubau F, Linares J, Fernandez Viladrich P, Gudiol F | J Antimicrob Chemother | 10.1093/jac/dki323 | 2005 |
| #20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 ) |
| #63580 | Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 69382 |
| #66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) . |
| #124043 | Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy . |
| #125438 | Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 ) |
| #125439 | Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 . |
| #126262 | A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 ) |
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