Klebsiella pneumoniae CCUG 68727 is an aerobe bacterium of the family Enterobacteriaceae.
aerobe genome sequence 16S sequence Bacteria| @ref 20215 |
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| Domain Bacteria |
| Phylum Pseudomonadota |
| Class Gammaproteobacteria |
| Order Enterobacterales |
| Family Enterobacteriaceae |
| Genus Klebsiella |
| Species Klebsiella pneumoniae |
| Full scientific name Klebsiella pneumoniae (Schroeter 1886) Trevisan 1887 (Approved Lists 1980) |
| Synonyms (1) |
| @ref | Growth | Type | Temperature (°C) | |
|---|---|---|---|---|
| 63517 | positive | growth | 30 |
| 63517 | Oxygen toleranceaerobe |
| @ref | Chebi-ID | Metabolite | Utilization activity | Kind of utilization tested | |
|---|---|---|---|---|---|
| 68374 | 29016 ChEBI | arginine | - | hydrolysis | from API ID32E |
| 68374 | 17057 ChEBI | cellobiose | + | builds acid from | from API ID32E |
| 68374 | 18333 ChEBI | D-arabitol | + | builds acid from | from API ID32E |
| 68374 | 18024 ChEBI | D-galacturonic acid | + | builds acid from | from API ID32E |
| 68374 | 17634 ChEBI | D-glucose | + | builds acid from | from API ID32E |
| 68374 | 16899 ChEBI | D-mannitol | + | builds acid from | from API ID32E |
| 68374 | 30849 ChEBI | L-arabinose | + | builds acid from | from API ID32E |
| 68374 | 18403 ChEBI | L-arabitol | - | builds acid from | from API ID32E |
| 68374 | 62345 ChEBI | L-rhamnose | - | builds acid from | from API ID32E |
| 68374 | 25094 ChEBI | lysine | + | degradation | from API ID32E |
| 68374 | 15792 ChEBI | malonate | + | assimilation | from API ID32E |
| 68374 | 17306 ChEBI | maltose | + | builds acid from | from API ID32E |
| 68374 | 17268 ChEBI | myo-inositol | + | builds acid from | from API ID32E |
| 68374 | 18257 ChEBI | ornithine | - | degradation | from API ID32E |
| 68374 | 18394 ChEBI | palatinose | - | builds acid from | from API ID32E |
| 68374 | Potassium 5-ketogluconate | - | builds acid from | from API ID32E | |
| 68374 | 15963 ChEBI | ribitol | + | builds acid from | from API ID32E |
| 68374 | 30911 ChEBI | sorbitol | + | builds acid from | from API ID32E |
| 68374 | 17992 ChEBI | sucrose | + | builds acid from | from API ID32E |
| 68374 | 27082 ChEBI | trehalose | + | builds acid from | from API ID32E |
| 68374 | 27897 ChEBI | tryptophan | - | energy source | from API ID32E |
| 68374 | 16199 ChEBI | urea | + | hydrolysis | from API ID32E |
| @ref | Value | Activity | Ec | |
|---|---|---|---|---|
| 68374 | alpha-galactosidase | + | 3.2.1.22 | from API ID32E |
| 68374 | alpha-glucosidase | - | 3.2.1.20 | from API ID32E |
| 68374 | alpha-maltosidase | - | from API ID32E | |
| 68374 | arginine dihydrolase | - | 3.5.3.6 | from API ID32E |
| 68374 | beta-galactosidase | + | 3.2.1.23 | from API ID32E |
| 68374 | beta-glucosidase | + | 3.2.1.21 | from API ID32E |
| 68374 | beta-glucuronidase | - | 3.2.1.31 | from API ID32E |
| 68374 | L-aspartate arylamidase | + | 3.4.11.21 | from API ID32E |
| 68374 | lipase | - | from API ID32E | |
| 68374 | lysine decarboxylase | + | 4.1.1.18 | from API ID32E |
| 68374 | N-acetyl-beta-glucosaminidase | - | 3.2.1.52 | from API ID32E |
| 68374 | ornithine decarboxylase | - | 4.1.1.17 | from API ID32E |
| 68374 | urease | + | 3.5.1.5 | from API ID32E |
| @ref | ODC | ADH (Arg) | LDC (Lys) | URE | LARL | GAT | 5KG | LipaseLIP | Phenol red (Acidification)RP | beta GLU | MAN | MAL | ADO | PLE | beta GUR | MNT | IND | N-Acetyl-beta-Glucosaminidasebeta NAG | beta GAL | GLU | SAC | LARA | DARL | alpha GLU | alpha GAL | TRE | RHA | INO | CEL | SOR | alpha-MaltosidasealphaMAL | L-aspartic acid arylamidaseAspA | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 63517 | - | - | + | + | - | + | - | - | - | + | + | + | + | - | - | + | - | - | + | + | + | + | + | - | + | + | - | + | + | + | - | + |
| @ref | Description | Assembly level | INSDC accession | BV-BRC accession | NCBI tax ID | Score | |
|---|---|---|---|---|---|---|---|
| 66792 | P13-U61 assembly for Klebsiella pneumoniae NCTC 13442 | contig | 573 | 52.06 | |||
| 66792 | 32512_G01 assembly for Klebsiella pneumoniae NCTC13442 | contig | 573 | 39.69 |
| @ref | Description | Accession | Length | Database | NCBI tax ID | |
|---|---|---|---|---|---|---|
| 124043 | Klebsiella pneumoniae strain NCTC 13442 16S ribosomal RNA gene, partial sequence. | OQ569487 | 1404 | 573 |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125439 | spore_formation | BacteriaNetⓘ | no | 96.80 | no |
| 125439 | motility | BacteriaNetⓘ | yes | 72.30 | no |
| 125439 | gram_stain | BacteriaNetⓘ | negative | 98.40 | no |
| 125439 | oxygen_tolerance | BacteriaNetⓘ | aerobe | 82.30 | no |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125438 | gram-positive | gram-positiveⓘ | no | 100.00 | no |
| 125438 | anaerobic | anaerobicⓘ | no | 97.82 | no |
| 125438 | spore-forming | spore-formingⓘ | no | 91.94 | no |
| 125438 | aerobic | aerobicⓘ | no | 53.46 | yes |
| 125438 | thermophilic | thermophileⓘ | no | 98.50 | no |
| 125438 | flagellated | motile2+ⓘ | no | 79.84 | no |
| Topic | Title | Authors | Journal | DOI | Year | |
|---|---|---|---|---|---|---|
| Impact of ceftazidime avibactam on colonization by carbapenem resistant Enterobacterales during treatment of related infections. | Onal U, Tuzemen U, Kaya PK, Mercan D, Aslan F, Caliskan G, Iscimen R, Ozakin C, Akalin H. | Sci Rep | 10.1038/s41598-025-14817-z | 2025 | ||
| Comparative analysis of selected methods of carbapenemase determination among clinical Klebsiella pneumoniae. | Pruss A, Skierska A, Kwiatkowski P, Masiuk H, Jursa-Kulesza J, Giedrys-Kalemba S, Bilska I, Sienkiewicz M, Melnyk MV, Dolegowska B. | PLoS One | 10.1371/journal.pone.0318852 | 2025 | ||
| Characterization of Carbapenem-Resistant Gram-Negative Bacilli Isolates in Multispecialty Private Hospitals in Lagos, Nigeria. | Salau M, Kositanont U, Noisumdaeng P, Ogunsola F, Ettu AO, Adewojo D, Ojimma C, Ojomaikre O, Changkaew K. | Infect Dis Rep | 10.3390/idr17050119 | 2025 | ||
| LC-MS/MS metabolomics unravels the resistant phenotype of carbapenemase-producing Enterobacterales. | Dixon B, Ahmed WM, Fowler SJ, Felton T, Trivedi DK. | Metabolomics | 10.1007/s11306-025-02300-9 | 2025 | ||
| Comprehensive Genome Analysis of Colistin-Only-Sensitive KPC-2 and NDM1-1-Coproducing Klebsiella pneumoniae ST11 and Acinetobacter baumannii ST2 From a Critically Ill Patient With COVID-19 in Saudi Arabia: Whole Genome Sequencing (WGS) of K. pneumoniae ST11 and A. baumannii ST2. | Al-Zahrani IA, Brek TM. | Int J Microbiol | 10.1155/2024/9233075 | 2024 | ||
| In Vitro Activity of "Old" and "New" Antimicrobials against the Klebsiella pneumoniae Complex. | Sekowska A. | Antibiotics (Basel) | 10.3390/antibiotics13020126 | 2024 | ||
| Improving Turnaround Times for Routine Antimicrobial Sensitivity Testing Following European Committee on Antimicrobial Susceptibility Testing Methodology in Patients with Bacteraemia. | Edmondson R, Saeed K, Green S, O'Dwyer M. | Antibiotics (Basel) | 10.3390/antibiotics13111094 | 2024 | ||
| Curcumin-meropenem synergy in carbapenem resistant Klebsiella pneumoniae curcumin-meropenem synergy. | Gulen D, Safak B, Erdal B, Gunaydin B. | Iran J Microbiol | 10.18502/ijm.v13i3.6397 | 2021 | ||
| Rapid culture-independent loop-mediated isothermal amplification detection of antimicrobial resistance markers from environmental water samples. | Hassan MM, van Vliet AHM, Higgins O, Burke LP, Chueiri A, O'Connor L, Morris D, Smith TJ, La Ragione RM. | Microb Biotechnol | 10.1111/1751-7915.14227 | 2023 | ||
| Loop-mediated isothermal amplification assay detects multiple alleles of bla OXA-51-like genes in Acinetobacter baumannii and other Gram-negative bacteria despite primer-template mismatches. | Carascal MB, Macalalad LS, Petronio-Santos JA, Destura RV, Rivera WL. | Heliyon | 10.1016/j.heliyon.2024.e35653 | 2024 | ||
| Photodynamic inactivation of multidrug-resistant strains of Klebsiella pneumoniae and Pseudomonas aeruginosa in municipal wastewater by tetracationic porphyrin and violet-blue light: The impact of wastewater constituents. | Muskovic M, Planinic M, Crepulja A, Lusic M, Glad M, Loncaric M, Malatesti N, Gobin I. | PLoS One | 10.1371/journal.pone.0290080 | 2023 | ||
| Critically Important Antimicrobial Resistance Trends in Salmonella Derby and Salmonella Typhimurium Isolated from the Pork Production Chain in Brazil: A 16-Year Period. | Pissetti C, de Freitas Costa E, Zenato KS, de Itapema Cardoso MR. | Pathogens | 10.3390/pathogens11080905 | 2022 | ||
| Pathogenicity | In Vitro and In Vivo Characterization of NOSO-502, a Novel Inhibitor of Bacterial Translation. | Racine E, Nordmann P, Pantel L, Sarciaux M, Serri M, Houard J, Villain-Guillot P, Demords A, Vingsbo Lundberg C, Gualtieri M. | Antimicrob Agents Chemother | 10.1128/aac.01016-18 | 2018 | |
| Carbapenemase Production and Detection of Colistin-Resistant Genes in Clinical Isolates of Escherichia Coli from the Ho Teaching Hospital, Ghana. | Deku JG, Duedu KO, Kpene GE, Kinanyok S, Feglo PK. | Can J Infect Dis Med Microbiol | 10.1155/2022/1544624 | 2022 | ||
| Burden of Fluoroquinolone Resistance in Clinical Isolates of Escherichia coli at the Ho Teaching Hospital, Ghana. | Deku JG, Duedu KO, Ativi E, Kpene GE, Feglo PK. | Ethiop J Health Sci | 10.4314/ejhs.v32i1.11 | 2022 | ||
| Pathogenicity | The emergence of carbapenem-resistant Klebsiella pneumoniae isolates producing OXA-48 and NDM in the Southern (Asir) province, Saudi Arabia. | Al-Zahrani IA, Alsiri BA. | Saudi Med J | 10.15537/smj.2018.1.21094 | 2018 | |
| Characterization of the Bacterial Communities Inhabiting Tropical Propolis of Puerto Rico. | Perez Matos AE, Bacci G, Borruso L, Landolfi M, Petrocchi D, Renzi S, Perito B. | Microorganisms | 10.3390/microorganisms11051130 | 2023 | ||
| Pathogenicity | Emergence of OXA-162 Carbapenemase- and DHA-1 AmpC Cephalosporinase-Producing Sequence Type 11 Klebsiella pneumoniae Causing Community-Onset Infection in Greece. | Voulgari E, Poulou A, Dimitroulia E, Politi L, Ranellou K, Gennimata V, Markou F, Pournaras S, Tsakris A. | Antimicrob Agents Chemother | 10.1128/aac.01514-15 | 2015 | |
| Evaluation of the NG-Test CARBA 5 Lateral Flow Assay with an IMP-27-Producing Morganella morganii and Other Morganellaceae. | Tarlton NJ, Wallace MA, Potter RF, Zhang K, Dantas G, Dubberke ER, Burnham CD, Yarbrough ML. | Microbiol Spectr | 10.1128/spectrum.00793-23 | 2023 | ||
| Enzymology | Comparison of a novel, rapid chromogenic biochemical assay, the Carba NP test, with the modified Hodge test for detection of carbapenemase-producing Gram-negative bacilli. | Vasoo S, Cunningham SA, Kohner PC, Simner PJ, Mandrekar JN, Lolans K, Hayden MK, Patel R. | J Clin Microbiol | 10.1128/jcm.00965-13 | 2013 | |
| Pathogenicity | Evaluation of a modified meropenem hydrolysis assay on a large cohort of KPC and VIM carbapenemase-producing Enterobacteriaceae. | Calderaro A, Buttrini M, Piergianni M, Montecchini S, Martinelli M, Covan S, Piccolo G, Medici MC, Arcangeletti MC, Chezzi C, De Conto F. | PLoS One | 10.1371/journal.pone.0174908 | 2017 | |
| Prevalence and Characterization of Beta-Lactam and Carbapenem-Resistant Bacteria Isolated from Organic Fresh Produce Retailed in Eastern Spain. | Jimenez-Belenguer AI, Ferrus MA, Hernandez M, Garcia-Hernandez J, Moreno Y, Castillo MA. | Antibiotics (Basel) | 10.3390/antibiotics12020387 | 2023 | ||
| Occurrence and distribution of extended-spectrum beta-lactamase in clinical Escherichia coli isolates at Ho Teaching Hospital in Ghana. | Deku JG, Duedu KO, Ativi E, Kpene GE, Feglo PK. | Ghana Med J | 10.4314/gmj.v55i4.11 | 2021 | ||
| Enzymology | Development of two real-time multiplex PCR assays for the detection and quantification of eight key bacterial pathogens in lower respiratory tract infections. | Gadsby NJ, McHugh MP, Russell CD, Mark H, Conway Morris A, Laurenson IF, Hill AT, Templeton KE. | Clin Microbiol Infect | 10.1016/j.cmi.2015.05.004 | 2015 | |
| Insights into the Resistome and Phylogenomics of a ST195 Multidrug-Resistant Acinetobacter baumannii Clinical Isolate from the Czech Republic. | Mlynarcik P, Dolejska M, Vagnerova I, Petrzelova J, Sukkar I, Zdarska V, Kolar M. | Life (Basel) | 10.3390/life11101079 | 2021 | ||
| Pathotyping and antimicrobial susceptibility testing of Escherichia coli isolates from neonatal calves. | Khawaskar DP, Sinha DK, Lalrinzuala MV, Athira V, Kumar M, Chhakchhuak L, Mohanapriya K, Sophia I, Abhishek, Kumar ORV, Chaudhuri P, Singh BR, Thomas P. | Vet Res Commun | 10.1007/s11259-021-09857-5 | 2022 | ||
| Pathogenicity | In Vitro Activities of Ceftazidime-Avibactam, Aztreonam-Avibactam, and a Panel of Older and Contemporary Antimicrobial Agents against Carbapenemase-Producing Gram-Negative Bacilli. | Vasoo S, Cunningham SA, Cole NC, Kohner PC, Menon SR, Krause KM, Harris KA, De PP, Koh TH, Patel R. | Antimicrob Agents Chemother | 10.1128/aac.02019-15 | 2015 | |
| Primer Evaluation for PCR and its Application for Detection of Carbapenemases in Enterobacteriaceae. | Mlynarcik P, Roderova M, Kolar M. | Jundishapur J Microbiol | 10.5812/jjm.29314 | 2016 | ||
| Enzymology | Prevalence and characterisation of carbapenemase encoding genes in multidrug-resistant Gram-negative bacilli. | Haji SH, Aka STH, Ali FA. | PLoS One | 10.1371/journal.pone.0259005 | 2021 | |
| Metabolism | Comparative evaluation of a prototype chromogenic medium (ChromID CARBA) for detecting carbapenemase-producing Enterobacteriaceae in surveillance rectal swabs. | Vrioni G, Daniil I, Voulgari E, Ranellou K, Koumaki V, Ghirardi S, Kimouli M, Zambardi G, Tsakris A. | J Clin Microbiol | 10.1128/jcm.06848-11 | 2012 | |
| Enzymology | Evaluation of a new phenotypic OXA-48 disk test for differentiation of OXA-48 carbapenemase-producing Enterobacteriaceae clinical isolates. | Tsakris A, Poulou A, Bogaerts P, Dimitroulia E, Pournaras S, Glupczynski Y. | J Clin Microbiol | 10.1128/jcm.03318-14 | 2015 | |
| Pathogenicity | Whole-genome sequencing of a large collection of Myroides odoratimimus and Myroides odoratus isolates and antimicrobial susceptibility studies. | Gunzer F, Rudolph WW, Bunk B, Schober I, Peters S, Muller T, Oberheitmann B, Schrottner P. | Emerg Microbes Infect | 10.1038/s41426-018-0061-x | 2018 | |
| Metabolism | Comparative evaluation of combined-disk tests using different boronic acid compounds for detection of klebsiella pneumoniae carbapenemase-producing enterobacteriaceae clinical isolates. | Tsakris A, Themeli-Digalaki K, Poulou A, Vrioni G, Voulgari E, Koumaki V, Agodi A, Pournaras S, Sofianou D. | J Clin Microbiol | 10.1128/jcm.00666-11 | 2011 | |
| Evaluation of NG-Test Carba 5 for Rapid Phenotypic Detection and Differentiation of Five Common Carbapenemase Families: Results of a Multicenter Clinical Evaluation. | Jenkins S, Ledeboer NA, Westblade LF, Burnham CA, Faron ML, Bergman Y, Yee R, Mesich B, Gerstbrein D, Wallace MA, Robertson A, Fauntleroy KA, Klavins AS, Malherbe R, Hsiung A, Simner PJ. | J Clin Microbiol | 10.1128/jcm.00344-20 | 2020 | ||
| In silico identification of two peptides with antibacterial activity against multidrug-resistant Staphylococcus aureus. | Oyama LB, Olleik H, Teixeira ACN, Guidini MM, Pickup JA, Hui BYP, Vidal N, Cookson AR, Vallin H, Wilkinson T, Bazzolli DMS, Richards J, Wootton M, Mikut R, Hilpert K, Maresca M, Perrier J, Hess M, Mantovani HC, Fernandez-Fuentes N, Creevey CJ, Huws SA. | NPJ Biofilms Microbiomes | 10.1038/s41522-022-00320-0 | 2022 | ||
| The rumen microbiome: an underexplored resource for novel antimicrobial discovery. | Oyama LB, Girdwood SE, Cookson AR, Fernandez-Fuentes N, Prive F, Vallin HE, Wilkinson TJ, Golyshin PN, Golyshina OV, Mikut R, Hilpert K, Richards J, Wootton M, Edwards JE, Maresca M, Perrier J, Lundy FT, Luo Y, Zhou M, Hess M, Mantovani HC, Creevey CJ, Huws SA. | NPJ Biofilms Microbiomes | 10.1038/s41522-017-0042-1 | 2017 | ||
| Metallohelices that kill Gram-negative pathogens using intracellular antimicrobial peptide pathways. | Simpson DH, Hapeshi A, Rogers NJ, Brabec V, Clarkson GJ, Fox DJ, Hrabina O, Kay GL, King AK, Malina J, Millard AD, Moat J, Roper DI, Song H, Waterfield NR, Scott P. | Chem Sci | 10.1039/c9sc03532j | 2019 | ||
| Disinfecting Action of Gaseous Ozone on OXA-48-Producing Klebsiella pneumoniae Biofilm In Vitro. | Piletic K, Kovac B, Percic M, Zigon J, Broznic D, Karleusa L, Lucic Blagojevic S, Oder M, Gobin I | Int J Environ Res Public Health | 10.3390/ijerph19106177 | 2022 | ||
| Missense Mutations in the CrrB Protein Mediate Odilorhabdin Derivative Resistance in Klebsiella pneumoniae. | Pantel L, Juarez P, Serri M, Boucinha L, Lessoud E, Lanois A, Givaudan A, Racine E, Gualtieri M | Antimicrob Agents Chemother | 10.1128/AAC.00139-21 | 2021 |
| #20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 ) |
| #63517 | Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 68727 |
| #66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) . |
| #68374 | Automatically annotated from API ID32E . |
| #124043 | Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy . |
| #125438 | Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 ) |
| #125439 | Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 . |
| #126262 | A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 ) |
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