Name: Caballeronia cordobensis CCUG 64368
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 156716

Type strain:

Species: Caballeronia cordobensis

Culture col. no.: CCUG 64368, LMG 27620

NCBI tax ID(s): 1353886 (species)

SI-ID 382509

LMG27620, CCUG 64368

Section

Caballeronia cordobensis CCUG 64368 is an aerobe, mesophilic, motile bacterium that was isolated from Soil.

motile
aerobe
mesophilic
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Betaproteobacteria*
	Order	*Burkholderiales*
	Family	*Burkholderiaceae*
	Genus	*Caballeronia*
	Species	**Caballeronia cordobensis**
	Full Scientific Name (LPSN)	Caballeronia cordobensis (Draghi et al. 2014) Dobritsa and Samadpour 2016

Synonym

Burkholderia cordobensis

Information on morphological and physiological properties Morphology

[Ref.: #69480]	Gram stain	negative Confidence in %99.988

[Ref.: #69480]	Motility	yes Confidence in %92.381

[Ref.: #63122]

Incubation period

1 day

Information on culture and growth conditions Culture and growth conditions

	Temperatures	Kind of temperature		Temperature
[Ref.: #63122]			growth	30 °C

[Ref.: #63122]

Temperature range

mesophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #63122]

Oxygen tolerance

aerobe

[Ref.: #69480]	Ability of spore formation	no Confidence in %99.955
[Ref.: #69481]	Ability of spore formation	no Confidence in %100

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #63122]	Sample type/isolated from	Soil
[Ref.: #63122]	Sampling date	2010
[Ref.: #63122]	Geographic location (country and/or sea, region)	Córdoba province
[Ref.: #63122]	Country	Argentina
[Ref.: #63122]	Country ISO 3 Code	ARG
[Ref.: #63122]	Continent	Middle and South America
* marker position based on {}

Isolation sources categories

#Environmental

#Terrestrial

#Soil

What are isolation sources categories?

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

Genome sequence information:

Only first 5 entries are displayed. Click here to see all.

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Caballeronia cordobensis LMG 27620	GCA_001544575	contig	GenBank	1353886 tax ID	*
[Ref.: #66792]	Caballeronia cordobensis LMG 27620	GCA_001278535	scaffold	GenBank	1353886 tax ID	*
[Ref.: #66792]	Burkholderia cordobensis strain LMG 27620	1353886.5	wgs	PATRIC	1353886 tax ID	*
[Ref.: #66792]	Burkholderia cordobensis strain LMG 27620	1353886.4	wgs	PATRIC	1353886 tax ID	*
[Ref.: #66792]	Caballeronia cordobensis LMG 27620	2654587650	draft	JGI IMG/M	1353886 tax ID	*
[Ref.: #66792]	Caballeronia cordobensis LMG 27620	2724679457	draft	JGI IMG/M	1353886 tax ID	*

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from GenomeNet Sporulation v. 1 based on: Caballeronia cordobensis LMG 27620 NCBI: GCA_001278535.1
[Ref.: #69481]	spore-forming	no	100	no

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Caballeronia cordobensis LMG 27620 NCBI: GCA_001278535.1
[Ref.: #69480]	motile	yes	87.974	no
[Ref.: #69480]	flagellated	no	81.651	no
[Ref.: #69480]	gram-positive	no	98.019	no
[Ref.: #69480]	anaerobic	no	97.264	no
[Ref.: #69480]	halophile	no	92.372	no
[Ref.: #69480]	spore-forming	no	92.61	no
[Ref.: #69480]	thermophile	no	99.549	no
[Ref.: #69480]	glucose-util	yes	87.858	no
[Ref.: #69480]	aerobic	yes	90.67	yes
[Ref.: #69480]	glucose-ferment	no	89.341	no

Availability in culture collections External links

[Ref.: #63122]

Culture collection no.

CCUG 64368, LMG 27620

[Ref.: #109913]

SI-ID 382509

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Burkholderia megalochromosomata sp. nov., isolated from grassland soil.	Baek I, Seo B, Lee I, Lee K, Park SC, Yi H, Chun J	Int J Syst Evol Microbiol	10.1099/ijs.0.000046	2015	*
Phylogeny	Burkholderia cordobensis sp. nov., from agricultural soils.	Draghi WO, Peeters C, Cnockaert M, Snauwaert C, Wall LG, Zorreguieta A, Vandamme P	Int J Syst Evol Microbiol	10.1099/ijs.0.059667-0	2014	*
Genetics	Draft Genome Sequence of Burkholderia cordobensis Type Strain LMG 27620, Isolated from Agricultural Soils in Argentina.	Draghi WO, Mancini Villagra UM, Wall LG, Zorreguieta A	Genome Announc	10.1128/genomeA.01238-15	2015	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#63122 Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 64368

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69481

Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch: Predictions based on the model GenomeNet Sporulation v. 1 . ( DOI 10.21203/rs.3.rs-2527258/v1 )

#109913

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID382509.1 )

* These data were automatically processed and therefore are not curated

Change proposal

You found an error in BacDive? Please tell us about it!

Note that changes will be reviewed and judged. If your changes are legitimate, changes will occur within the next BacDive update. Only proposed changes supported by the according reference will be reviewed. The BacDive team reserves the right to reject proposed changes.

Search for species Caballeronia cordobensis in external resources:
SILVA
BRENDA
PANGAEA
StrainInfo
GBIF

Caballeronia cordobensis LMG 27620

Caballeronia cordobensis LMG 27620

Change proposal

Change proposal