Jejudonia soesokkakensis (CCUG 63830, KCTC 32325, SSK1-1)

Name: Jejudonia soesokkakensis (CCUG 63830, KCTC 32325, SSK1-1)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 156646

Type strain

Strain Designation SSK1-1

Culture col. no. CCUG 63830 KCTC 32325 SSK1-1

NCBI tax ID(s) 1323432

Special Collections CCUG KCTC

History KCTC <- JH Yoon, Sungkyunkwan Univ.

Links

Jejudonia soesokkakensis SSK1-1 is an aerobe, rod-shaped bacterium that was isolated from Water,seawter and freshwater junction.

rod-shaped aerobe genome sequence 16S sequence Bacteria

Name and taxonomic classification

SI-ID 408449

KCTC 32325,CCUG 63830

@ref 20215

Last LPSN update 2026-05-29 08:43:33

Domain Bacteria

Phylum Bacteroidota

Class Flavobacteriia

Order Flavobacteriales

Family Flavobacteriaceae

Genus Jejudonia

Species Jejudonia soesokkakensis

Full scientific name Jejudonia soesokkakensis Park et al. 2013

Morphology

Cell morphology

@ref	Cell shape	Gram stain	Confidence
67771	rod-shaped
67771		negative
125439		negative	99.551

Culture and growth conditions

Culture temp

@ref	Growth	Type	Temperature (°C)
63036	positive	growth	30
67771	positive	growth	30

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
63036	aerobe
67771	aerobe
125439	obligate aerobe	98.051

Spore formation

@ref	Spore formation	Confidence
125439		99.513

Observation

67771

Observationquinones: MK-6

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Engineered	#Industrial	#Plant (Factory)
#Environmental	#Aquatic	-

Isolation

@ref	Sample type	Sampling date	Geographic location	Country	Country ISO 3 Code	Continent
63036	Water,seawter and freshwater junction	2010	Jeju Island	Republic of Korea	KOR	Asia
67771	From the junction between the ocean and a freshwater spring		Jeju island	Republic of Korea	KOR	Asia

Interaction and safety

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	NCBI tax ID	Score
124043	ASM4266479v1 assembly for Jejudonia soesokkakensis CCUG 63830	scaffold	GCA_042664795	1323432	75.88

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
67771	Jejudonia soesokkakensis strain SSK1-1 16S ribosomal RNA gene, partial sequence	KC792554	1445		1323432

GC content

67771

GC-content (mol%)39.9

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: ASM4266479v1 assembly for Jejudonia soesokkakensis CCUG 63830
NCBI: GCA_042664795

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	oxygen_tolerance	BacteriaNetⓘ	obligate aerobe	98.05	no
125439	gram_stain	BacteriaNetⓘ	negative	99.55	no
125439	motility	BacteriaNetⓘ	no	81.51	no
125439	spore_formation	BacteriaNetⓘ	no	99.51	no

Literature

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Jejudonia soesokkakensis gen. nov., sp. nov., a member of the family Flavobacteriaceae isolated from the junction between the ocean and a freshwater spring, and emended description of the genus Aureitalea Park et al. 2012.	Park S, Lee JS, Lee KC, Yoon JH	Antonie Van Leeuwenhoek	10.1007/s10482-013-9934-0	2013

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#63036	Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 63830
#67771	Korean Collection for Type Cultures (KCTC) ; Curators of the KCTC;
#124043	Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy .
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Jejudonia soesokkakensis (CCUG 63830, KCTC 32325, SSK1-1)

Name and taxonomic classification

Morphology

Cell morphology

Culture and growth conditions

Culture temp

Physiology and metabolism

Oxygen tolerance

Spore formation

Observation

Isolation, sampling and environmental information

Isolation source categories

Isolation

Interaction and safety

Sequence information

Genome sequences

Genome browser: GCA_042664795

16S sequences

GC content

Genome-based predictions

Predictions

Literature

Literature

References

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