Streptococcus pseudopneumoniae (CCUG 62647)

Name: Streptococcus pseudopneumoniae (CCUG 62647)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 156548

Type strain

Culture col. no. CCUG 62647

NCBI tax ID(s) 257758

Special Collections CCUG

Links

Streptococcus pseudopneumoniae CCUG 62647 is a microaerophile, mesophilic prokaryote that was isolated from Human pharynx,healthy adolescent.

microaerophile mesophilic genome sequence

Name and taxonomic classification

SI-ID 411217

CCUG 62647

@ref 20215

Last LPSN update 2025-12-16 10:07:35

Domain Bacillati

Phylum Bacillota

Class Bacilli

Order Lactobacillales

Family Streptococcaceae

Genus Streptococcus

Species Streptococcus pseudopneumoniae

Full scientific name Streptococcus pseudopneumoniae Arbique et al. 2005

BacDive ID	Other strains from **Streptococcus pseudopneumoniae** (14)	Type strain
14831	S. pseudopneumoniae O 108, 0108, DSM 18670, ATCC BAA-960, CCUG ... (type strain)
152689	S. pseudopneumoniae CCUG 47366
153092	S. pseudopneumoniae CCUG 48465, ATCC BAA-891
153756	S. pseudopneumoniae CCUG 50866
153757	S. pseudopneumoniae CCUG 50867
153758	S. pseudopneumoniae CCUG 50868
153759	S. pseudopneumoniae CCUG 50869
153760	S. pseudopneumoniae CCUG 50870
153761	S. pseudopneumoniae CCUG 50871
156394	S. pseudopneumoniae CCUG 61551
156629	S. pseudopneumoniae CCUG 63747
156640	S. pseudopneumoniae CCUG 63793
156676	S. pseudopneumoniae CCUG 64062
157219	S. pseudopneumoniae CCUG 70658

Morphology

Cell morphology

@ref	Motility	Confidence
125438		90.5

Colony morphology

62868

Incubation period1 day

Culture and growth conditions

Culture temp

@ref	Growth	Type	Temperature (°C)	Range
62868	positive	growth	37	mesophilic

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
62868	microaerophile
125439	microaerophile	98.5

Spore formation

@ref	Spore formation	Confidence
125439		95.1

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Host	#Human	-
#Host Body-Site	#Oral cavity and airways	#Throat

Isolation

@ref	Sample type	Sampling date	Geographic location	Country	Country ISO 3 Code	Continent
62868	Human pharynx,healthy adolescent	2000	Aarhus	Denmark	DNK	Europe

Interaction and safety

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
66792	ASM201492v1 assembly for Streptococcus pseudopneumoniae CCUG 62647	scaffold	GCA_002014925	257758.50	8010662790	257758	55.38

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: Streptococcus pseudopneumoniae CCUG 62647
NCBI: GCA_002014925

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	spore_formation	BacteriaNetⓘ	no	95.10	no
125439	motility	BacteriaNetⓘ	no	89.90	no
125439	gram_stain	BacteriaNetⓘ	positive	89.10	no
125439	oxygen_tolerance	BacteriaNetⓘ	microaerophile	98.50	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Streptococcus pseudopneumoniae CCUG 62647
NCBI: GCA_002014925.1

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	yes	89.24	no
125438	anaerobic	anaerobicⓘ	no	59.87	no
125438	aerobic	aerobicⓘ	no	97.94	yes
125438	spore-forming	spore-formingⓘ	no	79.09	no
125438	thermophilic	thermophileⓘ	no	95.50	yes
125438	flagellated	motile2+ⓘ	no	90.50	no

Literature

Topic	Title	Authors	Journal	DOI	Year
Genetics	A Pangenome Approach for Discerning Species-Unique Gene Markers for Identifications of Streptococcus pneumoniae and Streptococcus pseudopneumoniae.	Gonzales-Siles L, Karlsson R, Schmidt P, Salva-Serra F, Jaen-Luchoro D, Skovbjerg S, Moore ERB, Gomila M.	Front Cell Infect Microbiol	10.3389/fcimb.2020.00222	2020
Metabolism	Proteotyping bacteria: Characterization, differentiation and identification of pneumococcus and other species within the Mitis Group of the genus Streptococcus by tandem mass spectrometry proteomics.	Karlsson R, Gonzales-Siles L, Gomila M, Busquets A, Salva-Serra F, Jaen-Luchoro D, Jakobsson HE, Karlsson A, Boulund F, Kristiansson E, Moore ERB.	PLoS One	10.1371/journal.pone.0208804	2018

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#62868	Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 62647
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Streptococcus pseudopneumoniae (CCUG 62647)

Name and taxonomic classification

Morphology

Cell morphology

Colony morphology

Culture and growth conditions

Culture temp

Physiology and metabolism

Oxygen tolerance

Spore formation

Isolation, sampling and environmental information

Isolation source categories

Isolation

Interaction and safety

Sequence information

Genome sequences

Genome browser: GCA_002014925

Genome-based predictions

Predictions

Literature

Literature

References

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