Serratia plymuthica (CCUG 61398, UCCCB111, SLU AS13)

Name: Serratia plymuthica (CCUG 61398, UCCCB111, SLU AS13)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 156380

Type strain

Culture col. no. CCUG 61398 UCCCB111 SLU AS13 AS 13

NCBI tax ID(s) 82996

Special Collections CCUG UCCCB

History Neupane S. Swedish University of Agricultural Sciences

Links

Serratia plymuthica CCUG 61398 is an aerobe bacterium that was isolated from oilseed rape, roots and rhizosphere soil.

aerobe genome sequence Bacteria

Name and taxonomic classification

SI-ID 410088

CCUG 61398

@ref 20215

Last LPSN update 2026-02-09 11:37:50

Domain Bacteria

Phylum Pseudomonadota

Class Gammaproteobacteria

Order Enterobacterales

Family Yersiniaceae

Genus Serratia

Species Serratia plymuthica

Full scientific name Serratia plymuthica (Lehmann and Neumann 1896) Breed et al. 1948 (Approved Lists 1980)

Synonyms (1)

"Bacterium plymuthicum"

BacDive ID	Other strains from **Serratia plymuthica** (12)	Type strain
5151	S. plymuthica Grimont 510, 510, CCUG 14509, DSM 4540, ATCC ... (type strain)
5152	S. plymuthica DSM 49, ATCC 7462, CCM 581
5153	S. plymuthica 8, DSM 8571
5154	S. plymuthica 9, DSM 8572
5155	S. plymuthica 392, DSM 30127
5156	S. plymuthica C 50, HRO-C50, DSM 22907
136295	S. plymuthica CIP 53.85, ATCC 992
139000	S. plymuthica CIP 77.12
141196	S. plymuthica CCUG 158
143780	S. plymuthica CCUG 21215
143781	S. plymuthica CCUG 21216
151573	S. plymuthica CCUG 44368

Morphology

Culture and growth conditions

Culture temp

@ref	Growth	Type	Temperature (°C)
62627	positive	growth	30
67772	positive	minimum	4
67772	positive	optimum	28
67772	positive	maximum	40

Culture pH

@ref	Ability	Type	PH	PH range
67772	positive	maximum	10.0	alkaliphile
67772	positive	minimum	4.0	acidophile

Physiology and metabolism

Oxygen tolerance

62627

Oxygen toleranceaerobe

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Environmental	#Terrestrial	#Soil
#Host	#Plants	#Herbaceous plants (Grass,Crops)
#Host Body-Site	#Plant	#Rhizosphere
#Host Body-Site	#Plant	#Root (Rhizome)

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent	Latitude	Longitude	Sampling date
62627	oilseed rape, roots and rhizosphere soil	Uppsala	Sweden	SWE	Europe			1998
67772	Rapeseed roots	Uppsala	Sweden	SWE	Europe	59.8581	17.6447 59.8581/17.6447

Interaction and safety

Risk assessment

67772

Biosafety level1

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
67772	ASM21480v1 assembly for Serratia sp. AS13	complete	GCA_000214805	768493.3	2506520009	768493	99.74

Genome-based predictions

Literature

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Whole-Genome k-mer Topic Modeling AssociatesBacterial Families.	Borrayo-Carbajal E, May-Canche I, Paredes O, Morales JA, Romo-Vazquez R, Velez-Perez H.	Genes (Basel)	10.3390/genes11020197	2020
Metabolism	Exploiting the Natural Diversity of RhlA Acyltransferases for the Synthesis of the Rhamnolipid Precursor 3-(3-Hydroxyalkanoyloxy)Alkanoic Acid.	Germer A, Tiso T, Muller C, Behrens B, Vosse C, Scholz K, Froning M, Hayen H, Blank LM.	Appl Environ Microbiol	10.1128/aem.02317-19	2020
Phylogeny	Evolution of combinatorial diversity in trans-acyltransferase polyketide synthase assembly lines across bacteria.	Helfrich EJN, Ueoka R, Ueoka R, Chevrette MG, Hemmerling F, Lu X, Leopold-Messer S, Minas HA, Burch AY, Lindow SE, Piel J, Medema MH.	Nat Commun	10.1038/s41467-021-21163-x	2021
Transcriptome	Transcriptomic changes in the plant pathogenic fungus Rhizoctonia solani AG-3 in response to the antagonistic bacteria Serratia proteamaculans and Serratia plymuthica.	Gkarmiri K, Finlay RD, Alstrom S, Thomas E, Cubeta MA, Hogberg N	BMC Genomics	10.1186/s12864-015-1758-z	2015
Metabolism	Transcriptional responses of the bacterial antagonist Serratia plymuthica to the fungal phytopathogen Rhizoctonia solani.	Neupane S, Finlay RD, Alstrom S, Elfstrand M, Hogberg N	Environ Microbiol Rep	10.1111/1758-2229.12203	2014
Genetics	Complete genome sequence of the plant-associated Serratia plymuthica strain AS13.	Neupane S, Finlay RD, Kyrpides NC, Goodwin L, Alstrom S, Lucas S, Land M, Han J, Lapidus A, Cheng JF, Bruce D, Pitluck S, Peters L, Ovchinnikova G, Held B, Han C, Detter JC, Tapia R, Hauser L, Ivanova N, Pagani I, Woyke T, Klenk HP, Hogberg N	Stand Genomic Sci	10.4056/sigs.2966299	2012

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#62627	Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 61398
#67772	The University of Coimbra Bacteria Culture Collection (UCCCB) ; Curators of the UCCCB;
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Serratia plymuthica (CCUG 61398, UCCCB111, SLU AS13)

Name and taxonomic classification

Morphology

Culture and growth conditions

Culture temp

Culture pH

Physiology and metabolism

Oxygen tolerance

Isolation, sampling and environmental information

Isolation source categories

Isolation

Interaction and safety

Risk assessment

Sequence information

Genome sequences

Genome browser: GCA_000214805

Genome-based predictions

Literature

Literature

References

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