Name: Mucilaginibacter dorajii DR-f4
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 156203

Type strain:

Species: Mucilaginibacter dorajii

Strain Designation: DR-f4

Culture col. no.: CCUG 60717, KCTC 23359, JCM 16601, KACC 14556, KACC {14556, UCCCB33

Strain history: Kim B.-C. Central Research Institute, Korea Ginseng Corp.

NCBI tax ID(s): 692994 (species)

SI-ID 376125

JCM 16601, KACC 14556, CECT 7660

Special Collections

Section

Mucilaginibacter dorajii DR-f4 is an aerobe, mesophilic, motile bacterium that was isolated from Rhizophere of Platycodon grandiflorum.

motile
rod-shaped
aerobe
mesophilic
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	09-12-2024 (DD-MM-YYYY)
	Domain	*Bacteria*
	Phylum	*Bacteroidota*
	Class	*Sphingobacteriia*
	Order	*Sphingobacteriales*
	Family	*Sphingobacteriaceae*
	Genus	*Mucilaginibacter*
	Species	**Mucilaginibacter dorajii**
	Full Scientific Name (LPSN)	Mucilaginibacter dorajii Kim et al. 2011

Information on morphological and physiological properties Morphology

[Ref.: #67771]	Gram stain	negative

[Ref.: #67771]	Cell shape	rod-shaped

[Ref.: #67771]	Motility	yes

[Ref.: #62410]

Incubation period

2 days

Information on culture and growth conditions Culture and growth conditions

		Temperature
[Ref.: #62410]	growth	30 °C
[Ref.: #67770]	growth	25 °C
[Ref.: #67771]	growth	25 °C
[Ref.: #67772]	optimum	20-25 °C
[Ref.: #67772]	minimum	4 °C
[Ref.: #67772]	maximum	30 °C

		pH
[Ref.: #67772]	maximum	8.0
[Ref.: #67772]	minimum	5.0
[Ref.: #67772]	optimum	5.5-6.0

Information on physiology and metabolism Physiology and metabolism

[Ref.: #62410]	Oxygen tolerance	aerobe
[Ref.: #67771]	Oxygen tolerance	aerobe

[Ref.: #67770]	Observation	quinones: MK-7
[Ref.: #67771]	Observation	quinones: MK-7

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #62410]	Sample type/isolated from	Rhizophere of Platycodon grandiflorum
[Ref.: #62410]	Sampling date	2009
[Ref.: #62410]	Geographic location (country and/or sea, region)	Chungcheongnam-Do
[Ref.: #62410]	Country	Republic of Korea
[Ref.: #62410]	Country ISO 3 Code	KOR
[Ref.: #62410]	Continent	Asia

[Ref.: #67770]	Sample type/isolated from	Rhizosphere of Platycodon grandiflorum at Chungcheongnam-do
[Ref.: #67770]	Host species	Platycodon grandiflorum
[Ref.: #67770]	Country	Republic of Korea
[Ref.: #67770]	Country ISO 3 Code	KOR
[Ref.: #67770]	Continent	Asia

[Ref.: #67771]	Sample type/isolated from	From rhizosphere soil of `P. grandiflorum`, Balloonflower, P. grandiflorum
[Ref.: #67771]	Country	Republic of Korea
[Ref.: #67771]	Country ISO 3 Code	KOR
[Ref.: #67771]	Continent	Asia

[Ref.: #67772]	Sample type/isolated from	Rhizosphere of Platycodon grandiflorum
[Ref.: #67772]	Sampling date	2009
[Ref.: #67772]	Geographic location (country and/or sea, region)	Chungcheongnam-Do
[Ref.: #67772]	Country	Republic of Korea
[Ref.: #67772]	Country ISO 3 Code	KOR
[Ref.: #67772]	Continent	Asia
* marker position based on {}

Isolation sources categories

#Host	#Plants	#Shrub (Scrub)
#Host Body-Site	#Plant	#Rhizosphere

What are isolation sources categories?

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #67772]

Biosafety level

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #67772]	Mucilaginibacter dorajii strain DR-f4 16S ribosomal RNA gene, partial sequence	GU139697	1444	GenBank ENA	692994 tax ID

[Ref.: #67770]	GC-content	42.6 mol%	high performance liquid chromatography (HPLC)
[Ref.: #67771]	GC-content	42.6 mol%

Availability in culture collections External links

[Ref.: #62410]

Culture collection no.

CCUG 60717, KCTC 23359, JCM 16601, KACC 14556, KACC {14556, UCCCB33

[Ref.: #109490]

SI-ID 376125

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Mucilaginibacter pineti sp. nov., isolated from Pinus pinaster wood from a mixed grove of pines trees.	Paiva G, Abreu P, Proenca DN, Santos S, Nobre MF, Morais PV	Int J Syst Evol Microbiol	10.1099/ijs.0.057737-0	2014	*
Metabolism	Mucilaginibacter ginsenosidivorax sp. nov., with ginsenoside converting activity isolated from sediment.	Kim JK, Choi TE, Liu QM, Park HY, Yi TH, Yoon MH, Kim SC, Im WT	J Microbiol	10.1007/s12275-013-2653-4	2013	*
Phylogeny	Mucilaginibacter dorajii sp. nov., isolated from the rhizosphere of Platycodon grandiflorum.	Kim BC, Lee KH, Kim MN, Lee J, Shin KS	FEMS Microbiol Lett	10.1111/j.1574-6968.2010.02026.x	2010	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#62410 Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 60717
#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#67771 Korean Collection for Type Cultures (KCTC) ; Curators of the KCTC;
#67772 The University of Coimbra Bacteria Culture Collection (UCCCB) ; Curators of the UCCCB;

#109490

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID376125.1 )

* These data were automatically processed and therefore are not curated

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