Name: Streptomyces roseolus DSM 40174
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 15565

Type strain:

Species: Streptomyces roseolus

Culture col. no.: DSM 40174, AS 4.1872, ATCC 23210, CBS 559.68, ETH 24181, IFO 12816, INA 5449/54, ISP 5174, KCC S-0411, NBRC 12816, RIA 1086, JCM 4411, BCRC 13778, CGMCC 4.1872, CGMCC 4.2005, NCIMB 13022, NRRL B-5424, VKM Ac-848

Strain history: KCC S-0411 <-- IFO 12816 <-- SAJ <-- ISP 5174 <-- INA 5449/54.

NCBI tax ID(s): 67358 (species)

SI-ID 92895

ATCC 23210, IFO 12816, ATCC 31047, DSM 40174, JCM 4411, CCRC 13778, NRRL B-5424, VKM Ac-848, NCIMB 13022, CBS 559.68, NBRC 12816, AS 4.1872, BCRC 13778, CGMCC 4.1872, AS 4.2005, LMG 20265, CGMCC 4.2005

Special Collections

DSMZ
JCM

Other strains from Streptomyces roseolus

Section

Streptomyces roseolus DSM 40174 is a spore-forming bacterium that was isolated from soil.

spore-forming
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Actinomycetota*
	Class	*Actinomycetes*
	Order	*Kitasatosporales*
	Family	*Streptomycetaceae*
	Genus	*Streptomyces*
	Species	**Streptomyces roseolus**
	Full Scientific Name (LPSN)	Streptomyces roseolus (Preobrazhenskaya and Sveshnikova 1957) Pridham et al. 1958 (Approved Lists 1980)

Synonym

"Actinomyces roseolus"

Information on culture and growth conditions Culture and growth conditions

[Ref.: #9367]

Culture medium

GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)

[Ref.: #9367]

Culture medium growth

[Ref.: #9367]

Culture medium link

Medium recipe at MediaDive

[Ref.: #9367]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #9367]			growth	28 °C
[Ref.: #67770]			growth	28 °C

Information on physiology and metabolism Physiology and metabolism

[Ref.: #69480]	Ability of spore formation	yes Confidence in %90.826
[Ref.: #69481]	Ability of spore formation	yes Confidence in %100

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #9367]	Sample type/isolated from	soil
[Ref.: #9367]	Country	USSR
[Ref.: #9367]	Continent	Asia
* marker position based on {}

Isolation sources categories

#Environmental

#Terrestrial

#Soil

What are isolation sources categories?

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #9367]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #20218]	Streptomyces roseolus strain AS 4.1872 16S ribosomal RNA gene, partial sequence	AY999899	1416	GenBank ENA	67358 tax ID	*
[Ref.: #20218]	Streptomyces roseolus gene for 16S ribosomal RNA, partial sequence, strain: JCM 4411	D44126	120	GenBank ENA	67358 tax ID	*
[Ref.: #20218]	Streptomyces roseolus gene for 16S rRNA, partial sequence, strain: NBRC 12816	AB184168	1446	GenBank ENA	67358 tax ID	*
[Ref.: #20218]	Streptomyces sp. NTRHn18 gene for 16S ribosomal RNA, partial sequence	AB920604	1323	GenBank ENA	1571740 tax ID	*

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Streptomyces roseolus JCM 4411	GCA_014649855	scaffold	GenBank ENA	67358 tax ID	*
[Ref.: #66792]	Streptomyces roseolus strain JCM 4411	67358.3	wgs	PATRIC	67358 tax ID	*

Data predicted using genome information as a basis Genome-based predictions

	Trait	Model	Prediction	Confidence in %	In training data
	Predictions from GenomeNet Sporulation v. 1 based on: Streptomyces roseolus JCM 4411 NCBI: GCA_014649855.1
[Ref.: #69481]	spore-forming	spore-formingⓘ	yes	100	no

	Trait	Model	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Streptomyces roseolus JCM 4411 NCBI: GCA_014649855.1
[Ref.: #69480]	gram-positive	gram-positiveⓘ	yes	89.924	no
[Ref.: #69480]	anaerobic	anaerobicⓘ	no	96.814	no
[Ref.: #69480]	aerobic	aerobicⓘ	yes	84.336	no
[Ref.: #69480]	spore-forming	spore-formingⓘ	yes	90.826	no
[Ref.: #69480]	thermophilic	thermophileⓘ	no	96.5	yes
[Ref.: #69480]	flagellated	motile2+ⓘ	no	88	no

Availability in culture collections External links

[Ref.: #9367]

Culture collection no.

DSM 40174, AS 4.1872, ATCC 23210, CBS 559.68, ETH 24181, IFO 12816, INA 5449/54, ISP 5174, KCC S-0411, NBRC 12816, RIA 1086, JCM 4411, BCRC 13778, CGMCC 4.1872, CGMCC 4.2005, NCIMB 13022, NRRL B-5424, VKM Ac-848

[Ref.: #84652]

SI-ID 92895

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Streptomyces xinjiangensis sp. nov., an actinomycete isolated from Lop Nur region.	Cheng C, Li YQ, Asem MD, Lu CY, Shi XH, Chu X, Zhang WQ, Di An D, Li WJ	Arch Microbiol	10.1007/s00203-016-1234-4	2016	*
	Design and optimization of a novel method for extraction of genistein.	Pandit NT, Patravale VB	Indian J Pharm Sci	10.4103/0250-474x.91583	2011	*

References

#9367

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 40174

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69481

Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch: Predictions based on the model GenomeNet Sporulation v. 1 . ( DOI 10.21203/rs.3.rs-2527258/v1 )

#84652

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID92895.1 )

* These data were automatically processed and therefore are not curated

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Streptomyces roseolus JCM 4411

Streptomyces roseolus JCM 4411

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