Name: Streptomyces roseolilacinus DSM 40173
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 15564

Type strain:

Species: Streptomyces roseolilacinus

Culture col. no.: DSM 40173, ATCC 19806, ATCC 19922, CBS 264.66, CBS 558.68, CUB 521, ETH 28444, IFO 12815, INA 14250, ISP 5173, KCC S-0335, NBRC 12815, RIA 1085, JCM 4335, BCRC 12329, CGMCC 4.1776, CGMCC 4.1865, JCM 4606, NRRL B-2699, VKM Ac-1276

Strain history: KCC S-0335 <-- H. Nonomura <-- ISP 5173 <-- INA 14250.

NCBI tax ID(s): 66904 (species)

SI-ID 37163

ATCC 19922, ATCC 19806, IFO 12815, DSM 40173, JCM 4335, CCRC 12329, NRRL B-2699, VKM Ac-1276, JCM 4606, CBS 558.68, CBS 264.66, NBRC 12815, BCRC 12329, CGMCC 4.1776

Special Collections

DSMZ
JCM

Section

Streptomyces roseolilacinus DSM 40173 is a spore-forming bacterium that was isolated from soil.

spore-forming
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Actinomycetota*
	Class	*Actinomycetes*
	Order	*Kitasatosporales*
	Family	*Streptomycetaceae*
	Genus	*Streptomyces*
	Species	**Streptomyces roseolilacinus**
	Full Scientific Name (LPSN)	Streptomyces roseolilacinus (Preobrazhenskaya and Sveshnikova 1957) Pridham et al. 1958 (Approved Lists 1980)

Synonym

"Actinomyces roseolilacinus"

Information on culture and growth conditions Culture and growth conditions

[Ref.: #9366]

Culture medium

GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)

[Ref.: #9366]

Culture medium growth

[Ref.: #9366]

Culture medium link

Medium recipe at MediaDive

[Ref.: #9366]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #9366]			growth	28 °C
[Ref.: #67770]			growth	28 °C

Information on physiology and metabolism Physiology and metabolism

[Ref.: #69480]

Oxygen tolerance

aerobe Confidence in %91.178

[Ref.: #69480]	Ability of spore formation	yes Confidence in %92.642
[Ref.: #69481]	Ability of spore formation	yes Confidence in %100

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #9366]	Sample type/isolated from	soil
* marker position based on {}

Isolation sources categories

#Environmental

#Terrestrial

#Soil

What are isolation sources categories?

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #9366]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Streptomyces roseolilacinus strain AS 4.1865 16S ribosomal RNA gene, partial sequence	AY999879	1405	GenBank ENA	66904 tax ID
[Ref.: #20218]	Streptomyces roseolilacinus gene for 16S ribosomal RNA, partial sequence, strain: JCM 4335	D44057	121	GenBank ENA	66904 tax ID	*
[Ref.: #20218]	Streptomyces roseolilacinus gene for 16S rRNA, partial sequence, strain: NBRC 12815	AB184167	1453	GenBank ENA	66904 tax ID	*

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Streptomyces roseolilacinus JCM 4335	GCA_014649335	scaffold	GenBank ENA	66904 tax ID	*
[Ref.: #66792]	Streptomyces roseolilacinus strain JCM 4335	66904.3	wgs	PATRIC	66904 tax ID	*

Data predicted using genome information as a basis Genome-based predictions

	Trait	Model	Prediction	Confidence in %	In training data
	Predictions from GenomeNet Sporulation v. 1 based on: Streptomyces roseolilacinus JCM 4335 NCBI: GCA_014649335.1
[Ref.: #69481]	spore-forming	spore-formingⓘ	yes	100	no

	Trait	Model	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Streptomyces roseolilacinus JCM 4335 NCBI: GCA_014649335.1
[Ref.: #69480]	gram-positive	gram-positiveⓘ	yes	89.161	no
[Ref.: #69480]	anaerobic	anaerobicⓘ	no	97.814	no
[Ref.: #69480]	aerobic	aerobicⓘ	yes	91.178	no
[Ref.: #69480]	spore-forming	spore-formingⓘ	yes	92.642	no
[Ref.: #69480]	thermophilic	thermophileⓘ	no	94	yes
[Ref.: #69480]	flagellated	motile2+ⓘ	no	85.588	no

Availability in culture collections External links

[Ref.: #9366]

Culture collection no.

DSM 40173, ATCC 19806, ATCC 19922, CBS 264.66, CBS 558.68, CUB 521, ETH 28444, IFO 12815, INA 14250, ISP 5173, KCC S-0335, NBRC 12815, RIA 1085, JCM 4335, BCRC 12329, CGMCC 4.1776, CGMCC 4.1865, JCM 4606, NRRL B-2699, VKM Ac-1276

[Ref.: #84650]	SI-ID 37163	*
[Ref.: #84651]	SI-ID 285984	*

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Streptomyces luozhongensis sp. nov., a novel actinomycete with antifungal activity and antibacterial activity.	Zhang R, Han X, Xia Z, Luo X, Wan C, Zhang L	Antonie Van Leeuwenhoek	10.1007/s10482-016-0790-6	2016	*
Phylogeny	Streptomyces indoligenes sp. nov., isolated from rhizosphere soil of Populus euphratica.	Luo X, Sun Y, Xie S, Wan C, Zhang L	Int J Syst Evol Microbiol	10.1099/ijsem.0.001049	2016	*
Pathogenicity	Physicochemical characters of a tyrosinase inhibitor produced by Streptomyces roseolilacinus NBRC 12815.	Nakashima T, Anzai K, Kuwahara N, Komaki H, Miyadoh S, Harayama S, Tianero MD, Tanaka J, Kanamoto A, Ando K	Biol Pharm Bull	10.1248/bpb.32.832	2009	*

References

#9366

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 40173

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69481

Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch: Predictions based on the model GenomeNet Sporulation v. 1 . ( DOI 10.21203/rs.3.rs-2527258/v1 )

#84650

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID37163.1 )

#84651

* These data were automatically processed and therefore are not curated

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Streptomyces roseolilacinus JCM 4335

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