Name: Streptomyces regensis RRL X-5263
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 15512

Type strain:

Species: Streptomyces regensis

Strain Designation: RRL X-5263

Culture col. no.: DSM 40551, ATCC 27461, CBS 749.72, IFO 13448, ISP 5551, NBRC 13448, RIA 1409, JCM 4820, BCRC 11890, CGMCC 4.1805, NRRL B-11479, VKM Ac-1289

Strain history: KCC S-0820 <-- IFO 13448 <-- SAJ <-- ISP 5551 <-- K. C. Gupta X 5263.

NCBI tax ID(s): 68263 (species)

SI-ID 389343

ATCC 27461, IFO 13448, DSM 40551, JCM 4820, CCRC 11890, NRRL B-11479, VKM Ac-1289, CBS 749.72, NBRC 13448, BCRC 11890, CGMCC 4.1805, LMG 20300

Section

Streptomyces regensis RRL X-5263 is a mesophilic bacterium that produces antibiotic compounds and was isolated from Soil.

antibiotic compound production
mesophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Actinomycetota*
	Class	*Actinomycetes*
	Order	*Kitasatosporales*
	Family	*Streptomycetaceae*
	Genus	*Streptomyces*
	Species	**Streptomyces regensis**
	Full Scientific Name (LPSN)	Streptomyces regensis Gupta et al. 1963 (Approved Lists 1980)

Information on culture and growth conditions Culture and growth conditions

[Ref.: #9634]

Culture medium

GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)

[Ref.: #9634]

Culture medium growth

[Ref.: #9634]

Culture medium link

Medium recipe at MediaDive

[Ref.: #9634]

Culture medium composition

expand / minimize

[Ref.: #9634]

Culture medium

ROLLED OATS MINERAL MEDIUM (DSMZ Medium 84)

[Ref.: #9634]

Culture medium growth

[Ref.: #9634]

Culture medium link

Medium recipe provided by DSMZ

	Temperatures	Kind of temperature		Temperature
[Ref.: #9634]			growth	28 °C
[Ref.: #67770]			growth	28 °C

[Ref.: #9634]	Temperature range	mesophilic
[Ref.: #67770]	Temperature range	mesophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #9634]	Name of produced compound	actinomycin
[Ref.: #9634]	Name of produced compound	actinomycin-complex

	Metabolite production	Metabolite	Production
[Ref.: #67770]		actinomycin ChEBI	yes

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #67770]	Sample type/isolated from	Soil
[Ref.: #67770]	Geographic location (country and/or sea, region)	Katra, Jammu Province
[Ref.: #67770]	Country	India
[Ref.: #67770]	Country ISO 3 Code	IND
[Ref.: #67770]	Continent	Asia
* marker position based on {}

[Ref.: #69479]

Global distribution of 16S sequence DQ026649 (>99% sequence identity) for Streptomyces from Microbeatlas

Aquatic Samples	3
Soil Samples	182
Animal Samples
Plant Samples
Total Samples	185

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #9634]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #20218]	Streptomyces regensis gene for 16S rRNA, partial sequence	AB122765	564	ENA	68263 tax ID	*
[Ref.: #20218]	Streptomyces regensis gene for 16S ribosomal RNA, partial sequence, strain: JCM 4820	D44387	120	ENA	68263 tax ID	*
[Ref.: #20218]	Streptomyces regensis gene for 16S rRNA, partial sequence, strain: NBRC 13448	AB184410	1465	ENA	68263 tax ID	*
[Ref.: #20218]	Streptomyces regensis strain NRRL B-11479 16S ribosomal RNA gene, partial sequence	DQ026649	1540	ENA	68263 tax ID	*

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Streptomyces regensis NRRL B-11479	GCA_001047335	contig	GenBank	68263 tax ID

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Streptomyces regensis NRRL B-11479 NCBI: GCA_001047335.1
[Ref.: #69480]	motile	no	92.52	no
[Ref.: #69480]	flagellated	no	97.493	no
[Ref.: #69480]	gram-positive	yes	84.49	no
[Ref.: #69480]	anaerobic	no	99.004	no
[Ref.: #69480]	aerobic	yes	91.527	no
[Ref.: #69480]	halophile	no	84.26	no
[Ref.: #69480]	spore-forming	yes	93.705	no
[Ref.: #69480]	thermophile	no	99.395	yes
[Ref.: #69480]	glucose-util	yes	88.617	no
[Ref.: #69480]	glucose-ferment	no	91.511	no

Availability in culture collections External links

[Ref.: #9634]

Culture collection no.

DSM 40551, ATCC 27461, CBS 749.72, IFO 13448, ISP 5551, NBRC 13448, RIA 1409, JCM 4820, BCRC 11890, CGMCC 4.1805, NRRL B-11479, VKM Ac-1289

[Ref.: #84598]

SI-ID 389343

References

#9634

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 40551

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#84598

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID389343.1 )

* These data were automatically processed and therefore are not curated

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Streptomyces regensis NRRL B-11479

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