Name: Streptomyces recifensis AX-18
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 15511

Type strain:

Species: Streptomyces recifensis

Strain Designation: AX-18

Culture col. no.: DSM 40115, ATCC 19803, CBS 555.68, IFO 12813, ISP 5115, NBRC 12813, RIA 1082, IAUR 3054, JCM 4408, BCRC 12086, CGMCC 4.1921, NRRL B-3811, VKM Ac-1890

Strain history: KCC S-0408 <-- IFO 12813 <-- SAJ <-- ISP 5115 <-- J. O. Falcão de Morais AX-18 (IAUR 3054).

NCBI tax ID(s): 67355 (species)

SI-ID 37102

ATCC 19803, IFO 12813, DSM 40115, JCM 4408, CCRC 12086, NRRL B-3811, VKM Ac-1890, CBS 555.68, NBRC 12813, BCRC 12086, CGMCC 4.1921

Section

Streptomyces recifensis AX-18 is a spore-forming, mesophilic, Gram-positive bacterium that was isolated from soil.

Gram-positive
spore-forming
mesophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Actinomycetota*
	Class	*Actinomycetes*
	Order	*Kitasatosporales*
	Family	*Streptomycetaceae*
	Genus	*Streptomyces*
	Species	**Streptomyces recifensis**
	Full Scientific Name (LPSN)	Streptomyces recifensis (Gonçalves de Lima et al. 1955) Falcão de Morais et al. 1957 (Approved Lists 1980)

Synonym

"Nocardia recifei"

Information on morphological and physiological properties Morphology

[Ref.: #69480]	Gram stain	positive Confidence in %100

Information on culture and growth conditions Culture and growth conditions

[Ref.: #9325]

Culture medium

GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)

[Ref.: #9325]

Culture medium growth

[Ref.: #9325]

Culture medium link

Medium recipe at MediaDive

[Ref.: #9325]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #9325]			growth	28 °C
[Ref.: #67770]			growth	28 °C

[Ref.: #9325]	Temperature range	mesophilic
[Ref.: #67770]	Temperature range	mesophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #69481]	Ability of spore formation	yes Confidence in %100
[Ref.: #69480]	Ability of spore formation	yes Confidence in %100

[Ref.: #9325]	Name of produced compound	antibiotic AX-18
[Ref.: #67770]	Name of produced compound	Antibiotic AX-18

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #9325]	Sample type/isolated from	soil
* marker position based on {}

Isolation sources categories

#Environmental

#Terrestrial

#Soil

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence AB184165 (>99% sequence identity) for Streptomyces from Microbeatlas

Aquatic Samples	22
Soil Samples	348
Animal Samples	67
Plant Samples	7
Total Samples	444

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #9325]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #20218]	Streptomyces recifensis gene for 16S ribosomal RNA, partial sequence, strain: JCM 4408	D44123	120	ENA	67355 tax ID	*
[Ref.: #20218]	Streptomyces recifensis gene for 16S rRNA, partial sequence, strain: NBRC 12813	AB184165	1460	ENA	67355 tax ID	*

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Streptomyces recifensis NRRL B-3811	GCA_002154615	scaffold	GenBank	67355 tax ID

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from GenomeNet Sporulation v. 1 based on: Streptomyces recifensis NRRL B-3811 NCBI: GCA_002154615.1
[Ref.: #69481]	spore-forming	yes	100	no

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Streptomyces recifensis NRRL B-3811 NCBI: GCA_002154615.1
[Ref.: #69480]	flagellated	no	98.184	no
[Ref.: #69480]	gram-positive	yes	90.499	no
[Ref.: #69480]	anaerobic	no	98.968	no
[Ref.: #69480]	halophile	no	93.395	no
[Ref.: #69480]	spore-forming	yes	94.712	no
[Ref.: #69480]	glucose-util	yes	88.095	no
[Ref.: #69480]	aerobic	yes	93.397	no
[Ref.: #69480]	thermophile	no	97.336	yes
[Ref.: #69480]	motile	no	93.538	no
[Ref.: #69480]	glucose-ferment	no	90.046	no

Availability in culture collections External links

[Ref.: #9325]

Culture collection no.

DSM 40115, ATCC 19803, CBS 555.68, IFO 12813, ISP 5115, NBRC 12813, RIA 1082, IAUR 3054, JCM 4408, BCRC 12086, CGMCC 4.1921, NRRL B-3811, VKM Ac-1890

[Ref.: #84597]

SI-ID 37102

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Streptomyces bauhiniae sp. nov., isolated from tree bark of Bauhinia variegata Linn. in Thailand.	Kanchanasin P, Yuki M, Kudo T, Ohkuma M, Kuncharoen N, Phongsopitanun W, Tanasupawat S	Int J Syst Evol Microbiol	10.1099/ijsem.0.003743	2020	*
Phylogeny	Streptomyces gramineus sp. nov., an antibiotic-producing actinobacterium isolated from bamboo (Sasa borealis) rhizosphere soil.	Lee HJ, Han SI, Whang KS	Int J Syst Evol Microbiol	10.1099/ijs.0.030163-0	2011	*

References

#9325

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 40115

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69481

Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch: Predictions based on the model GenomeNet Sporulation v. 1 . ( DOI 10.21203/rs.3.rs-2527258/v1 )

#84597

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID37102.1 )

* These data were automatically processed and therefore are not curated

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Streptomyces recifensis NRRL B-3811

Streptomyces recifensis NRRL B-3811

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