Name: Streptomyces pilosus DSM 40097
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 15471

Type strain:

Species: Streptomyces pilosus

Culture col. no.: DSM 40097, ATCC 19797, CBS 549.68, IFO 12807, ISP 5097, KCC S-0403, NBRC 12807, RIA 1076, ETH 11686, JCM 4403, BCRC 12091, ICMP 145, KCTC 19058, NRRL 2721, NRRL ISP-5097, VKM Ac-1765

Strain history: KCC S-0403 <-- IFO 12807 <-- SAJ <-- ISP 5097 <-- ETH 11686.

NCBI tax ID(s): 28893 (species)

SI-ID 45636

ATCC 19797, IFO 12807, DSM 40097, JCM 4403, CCRC 12091, NRRL 2721, VKM Ac-1765, NRRL B-2721, CBS 549.68, NBRC 12807, BCRC 12091, ICMP 145, KCTC 19058

Other strains from Streptomyces pilosus

S. pilosus Tü 44, DSM 40714, NRRL 2857, ETH ...

Section

Streptomyces pilosus DSM 40097 is a spore-forming, mesophilic bacterium that was isolated from soil.

spore-forming
mesophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Actinomycetota*
	Class	*Actinomycetes*
	Order	*Kitasatosporales*
	Family	*Streptomycetaceae*
	Genus	*Streptomyces*
	Species	**Streptomyces pilosus**
	Full Scientific Name (LPSN)	Streptomyces pilosus Ettlinger et al. 1958 (Approved Lists 1980)

Synonym

Streptomyces flavoviridis

Information on morphological and physiological properties Morphology

[Ref.: #69480]	Gram stain	positive Confidence in %100

[Ref.: #69480]	Motility	no Confidence in %92.399

Multimedia content

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Caption:

Medium 65 28°C

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Intellectual property rights:

Information on culture and growth conditions Culture and growth conditions

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Culture medium

GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)

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Culture medium growth

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Culture medium link

Medium recipe at MediaDive

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Culture medium composition

expand / minimize

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Culture medium

ROLLED OATS MINERAL MEDIUM (DSMZ Medium 84)

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Culture medium growth

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Culture medium link

Medium recipe provided by DSMZ

	Temperatures	Kind of temperature		Temperature
[Ref.: #9309]			growth	28 °C
[Ref.: #67770]			growth	28 °C

[Ref.: #9309]	Temperature range	mesophilic
[Ref.: #67770]	Temperature range	mesophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #69481]	Ability of spore formation	yes Confidence in %100
[Ref.: #69480]	Ability of spore formation	yes Confidence in %100

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Name of produced compound

piloquinone

	Metabolite production	Metabolite	Production
[Ref.: #67770]		piloquinone	yes

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #9309]	Sample type/isolated from	soil
[Ref.: #9309]	Country	Italy
[Ref.: #9309]	Country ISO 3 Code	ITA
[Ref.: #9309]	Continent	Europe

[Ref.: #67770]	Sample type/isolated from	Soil
[Ref.: #67770]	Geographic location (country and/or sea, region)	Rome
[Ref.: #67770]	Country	Italy
[Ref.: #67770]	Country ISO 3 Code	ITA
[Ref.: #67770]	Continent	Europe
* marker position based on {}

Isolation sources categories

#Environmental

#Terrestrial

#Soil

What are isolation sources categories?

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

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Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #20218]	Streptomyces pilosus gene for 16S ribosomal RNA, partial sequence, strain: JCM 4403	D44118	121	ENA	28893 tax ID	*
[Ref.: #20218]	Streptomyces pilosus gene for 16S rRNA, partial sequence, strain: NBRC 12807	AB184161	1463	ENA	28893 tax ID	*

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Streptomyces pilosus JCM 4403	GCA_014649835	scaffold	GenBank	28893 tax ID
[Ref.: #66792]	Streptomyces pilosus strain JCM 4403	28893.3	wgs	PATRIC	28893 tax ID	*

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GC-content

72.5 mol%

genome sequence analysis

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from GenomeNet Sporulation v. 1 based on: Streptomyces pilosus strain JCM 4403 PATRIC: 28893.3
[Ref.: #69481]	spore-forming	yes	100	no

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Streptomyces pilosus strain JCM 4403 PATRIC: 28893.3
[Ref.: #69480]	gram-positive	yes	90.607	no
[Ref.: #69480]	anaerobic	no	99.146	no
[Ref.: #69480]	halophile	no	84.451	no
[Ref.: #69480]	spore-forming	yes	96.288	no
[Ref.: #69480]	glucose-util	yes	89.779	no
[Ref.: #69480]	motile	no	92.716	no
[Ref.: #69480]	flagellated	no	97.441	no
[Ref.: #69480]	aerobic	yes	93.635	no
[Ref.: #69480]	thermophile	no	98.543	no
[Ref.: #69480]	glucose-ferment	no	89.045	no

Availability in culture collections External links

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Culture collection no.

DSM 40097, ATCC 19797, CBS 549.68, IFO 12807, ISP 5097, KCC S-0403, NBRC 12807, RIA 1076, ETH 11686, JCM 4403, BCRC 12091, ICMP 145, KCTC 19058, NRRL 2721, NRRL ISP-5097, VKM Ac-1765

[Ref.: #84558]	SI-ID 45636	*
[Ref.: #84559]	SI-ID 289675	*

Literature:

Topic	Title	Authors	Journal	DOI	Year
Biotechnology	Improvement of Desferrioxamine B Production of Streptomyces pilosus ATCC 19797 With Use of Protease Inhibitor and Minerals Related to Its Activity.	Mortazavi M, Akbarzadeh A	Indian J Clin Biochem	10.1007/s12291-012-0197-8	2012	*

References

#9309

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 40097

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69481

Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch: Predictions based on the model GenomeNet Sporulation v. 1 . ( DOI 10.21203/rs.3.rs-2527258/v1 )

#84558

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID45636.1 )

#84559

* These data were automatically processed and therefore are not curated

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Streptomyces pilosus strain JCM 4403

Streptomyces pilosus strain JCM 4403

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