Streptomyces ochraceiscleroticus (DSM 40594, ATCC 15814, CBS 168.62)

Name: Streptomyces ochraceiscleroticus (DSM 40594, ATCC 15814, CBS 168.62)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 15432

Type strain

Strain Designation 10A-30

Culture col. no. DSM 40594 ATCC 15814 CBS 168.62 CBS 784.72 DSM 43155 21 more

NCBI tax ID(s) 47761

Special Collections DSMZ JCM JMRC

History DSMZ <- E.B. Shirling, ISP <- ATCC <- V.D. Kuznetsov, RIA, 10A-30 JCM <-- KCC A-0048 <-- RIA 710 (V. D. Kuznetsov 10A-30).

Links

Streptomyces ochraceiscleroticus 10A-30 is a bacterium that was isolated from soil.

genome sequence 16S sequence Bacteria

Name and taxonomic classification

SI-ID 14115

LMG 19349,ATCC 15814,CCRC 13310,DSM 43155,IFO 12394,IFO 13483,IMET 43492,JCM 3048,JCM 4801,NRRL B-3041,VKM Ac-651,PCM 2307,DSM 40594,CBS 784.72,CBS 168.62,AS 4.1096,NBRC 12394,NBRC 13483,BCRC 13310,CGMCC 4.1096

@ref 20215

Last LPSN update 2026-05-29 08:28:32

Domain Bacteria

Phylum Actinomycetota

Class Actinomycetes

Order Kitasatosporales

Family Streptomycetaceae

Genus Streptomyces

Species Streptomyces ochraceiscleroticus

Full scientific name Streptomyces ochraceiscleroticus Pridham 1970 (Approved Lists 1980)

Synonyms (1)

Chainia ochracea

BacDive ID	Other strains from **Streptomyces ochraceiscleroticus** (2)	Type strain
15433	S. ochraceiscleroticus DSM 41444
127941	S. ochraceiscleroticus SF001186,

Morphology

Cell morphology

@ref	Gram stain	Confidence	Motility
125439	positive	99.534
125439		93.781

Multimedia

@ref:	9670
multimedia content:	DSM_40594.jpg
multimedia.multimedia content:	https://www.dsmz.de/microorganisms/photos/DSM_40594.jpg
caption:	Medium 65 28°C
intellectual property rights:	© Leibniz-Institut DSMZ
manual_annotation:	1

Culture and growth conditions

Culture medium

@ref	Name	Growth	Medium link	Composition
9670	GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)		Medium recipe at MediaDive	Name: GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) Composition: Agar 18.0 g/l Malt extract 10.0 g/l Yeast extract 4.0 g/l Glucose 4.0 g/l CaCO3 2.0 g/l Distilled water
9670	STARCH - MINERAL SALT - AGAR (STMS) (DSMZ Medium 252)		Medium recipe at MediaDive	Name: STARCH - MINERAL SALT - AGAR (STMS) (DSMZ Medium 252) Composition: Agar 14.985 g/l Starch 9.99001 g/l (NH4)2SO4 1.998 g/l CaCO3 1.998 g/l K2HPO4 0.999001 g/l MgSO4 x 7 H2O 0.999001 g/l NaCl 0.999001 g/l FeSO4 x 7 H2O 0.000999001 g/l MnCl2 x 4 H2O 0.000999001 g/l ZnSO4 x 7 H2O 0.000999001 g/l Distilled water

Culture temp

@ref	Growth	Type	Temperature (°C)
9670	positive	growth	28
67770	positive	growth	28

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
125439	obligate aerobe	98.786

Spore formation

@ref	Spore formation	Confidence
125439		91.277
125438		91.436

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Environmental	#Terrestrial	#Soil

Isolation

9670

Sample typesoil

Taxonmaps

69479

Global distribution of 16S sequence HQ244444 (>99% sequence identity) for Streptomyces from Microbeatlas

Aquatic Samples	28
Soil Samples	379
Animal Samples	28
Plant Samples	3
Total Samples	438

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
9670	1	Risk group (German classification) According to TRBA 466

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
67770	ASM72048v1 assembly for Streptomyces ochraceiscleroticus NRRL ISP-5594	contig	GCA_000720485	47761.3	2767802065	47761	49.63
124043	ASM4265818v1 assembly for Streptomyces ochraceiscleroticus CGMCC 4.1096	scaffold	GCA_042658185			47761	47.89

16S sequences

@ref	Description	Accession	Length	NCBI tax ID
20218	Streptomyces ochraceiscleroticus strain CGMCC 4.1096 16S ribosomal RNA gene, partial sequence	HQ244444	1380	47761
20218	Streptomyces ochraceiscleroticus gene for 16S ribosomal RNA, partial sequence, strain: JCM 4801	D44372	121	47761
20218	Streptomyces ochraceiscleroticus gene for 16S rRNA, partial sequence, strain: NBRC 13483	AB184435	1477	47761
20218	Streptomyces ochraceiscleroticus strain NRRL B-3041T 16S ribosomal RNA gene, partial sequence	DQ442533	1457	47761
9670	Streptomyces ochraceiscleroticus gene for 16S rRNA, partial sequence, strain: NBRC 12394	AB184094	1480	47761

GC content

@ref	GC-content (mol%)	Method
67770	71.4	genome sequence analysis

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: ASM72048v1 assembly for Streptomyces ochraceiscleroticus NRRL ISP-5594
NCBI: GCA_000720485

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	oxygen_tolerance	BacteriaNetⓘ	obligate aerobe	98.79	no
125439	motility	BacteriaNetⓘ	no	93.78	no
125439	gram_stain	BacteriaNetⓘ	positive	99.53	no
125439	spore_formation	BacteriaNetⓘ	yes	91.28	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Streptomyces ochraceiscleroticus NRRL ISP-5594
NCBI: GCA_000720485.1

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	yes	87.31	no
125438	anaerobic	anaerobicⓘ	no	96.50	no
125438	aerobic	aerobicⓘ	yes	89.13	no
125438	spore-forming	spore-formingⓘ	yes	91.44	no
125438	thermophilic	thermophileⓘ	no	96.50	yes
125438	flagellated	motile2+ⓘ	no	83.00	no

Literature

Topic	Title	Authors	Journal	DOI	Year
	Discovery of the Azaserine Biosynthetic Pathway Uncovers a Biological Route for alpha-Diazoester Production.	Van Cura D, Ng TL, Huang J, Hager H, Hartwig JF, Keasling JD, Balskus EP.	Angew Chem Int Ed Engl	10.1002/anie.202304646	2023
Enzymology	Bioelectrocatalyst for O₂ Reduction Based on a Novel Recombinant Two-Domain Laccase from Streptomyces ochraceisleroticus Immobilized on Naphthyl-Modified MWCNTs.	Trubitsina L, Egorov K, Abdullatypov A, Petrakova M, Trubitsin I, Alferov S, Leontievsky A, Ponamoreva O.	Int J Mol Sci	10.3390/ijms26189143	2025
Phylogeny	A taxonomic study of the genus Streptomyces by analysis of ribosomal protein AT-L30.	Ochi K.	Int J Syst Bacteriol	10.1099/00207713-45-3-507	1995
Genetics	Phylogenomic Analysis of Natural Products Biosynthetic Gene Clusters Allows Discovery of Arseno-Organic Metabolites in Model Streptomycetes.	Cruz-Morales P, Kopp JF, Martinez-Guerrero C, Yanez-Guerra LA, Selem-Mojica N, Ramos-Aboites H, Feldmann J, Barona-Gomez F.	Genome Biol Evol	10.1093/gbe/evw125	2016
Genetics	Genome-Based Taxonomic Classification of the Phylum Actinobacteria.	Nouioui I, Carro L, Garcia-Lopez M, Meier-Kolthoff JP, Woyke T, Kyrpides NC, Pukall R, Klenk HP, Goodfellow M, Goker M.	Front Microbiol	10.3389/fmicb.2018.02007	2018
	Production, Purification, and Characterization of beta-(1-4)-Endoxylanase of Streptomyces roseiscleroticus.	Grabski AC, Jeffries TW.	Appl Environ Microbiol	10.1128/aem.57.4.987-992.1991	1991

References

#9670	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 40594
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#20216	Curators of the JMRC: Jena Microbial Resource Collection (JMRC):
#20218	Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#124043	Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy .
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Streptomyces ochraceiscleroticus (DSM 40594, ATCC 15814, CBS 168.62)

Name and taxonomic classification

Morphology

Cell morphology

Multimedia

Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Oxygen tolerance

Spore formation

Isolation, sampling and environmental information

Isolation source categories

Isolation

Taxonmaps

Interaction and safety

Risk assessment

Sequence information

Genome sequences

Genome browser: GCA_000720485

16S sequences

GC content

Genome-based predictions

Predictions

Literature

Literature

References

BacDive

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