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Information on genomic background e.g. entries in nucleic sequence databass Sequence information
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16S Sequence information: |
Only first 5 entries are displayed. Click here to see all.Click here to see only first 5 entries. |
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Sequence accession description |
Seq. accession number |
Sequence length (bp) |
Sequence database |
Associated NCBI tax ID |
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[Ref.: #20218] |
Streptomyces nodosus rrnB operon 16S ribosomal RNA, 23S ribosomal RNA, and 5S ribosomal RNA, complete sequence |
AF114033 |
6195 |
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40318 tax ID |
* |
[Ref.: #20218] |
Streptomyces nodosus rrnD operon 16S ribosomal RNA, 23S ribosomal RNA, and 5S ribosomal RNA, complete sequence |
AF114034 |
6169 |
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40318 tax ID |
* |
[Ref.: #20218] |
Streptomyces nodosus rrnE operon 16S ribosomal RNA, 23S ribosomal RNA, and 5S ribosomal RNA, complete sequence |
AF114035 |
6174 |
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40318 tax ID |
* |
[Ref.: #20218] |
Streptomyces nodosus rrnF operon 16S ribosomal RNA, 23S ribosomal RNA, and 5S ribosomal RNA, complete sequence |
AF114036 |
6175 |
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40318 tax ID |
* |
[Ref.: #20218] |
Streptomyces nodosus gene for 16S ribosomal RNA, partial sequence, strain: JCM 4656 |
D44288 |
120 |
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40318 tax ID |
* |
[Ref.: #20218] |
Streptomyces nodosus gene for 16S rRNA, partial sequence, strain: NBRC 12895 |
AB184226 |
1476 |
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40318 tax ID |
* |
[Ref.: #20218] |
Streptomyces nodosus strain NRRL B-2371 16S ribosomal RNA gene, partial sequence |
DQ026661 |
1495 |
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40318 tax ID |
* |
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Availability in culture collections External links
[Ref.: #9320] |
Culture collection no. |
DSM 40109, ATCC 14899, ATCC 23942, CBS 926.68, IFO 12895, ISP 5109, JCM 4297, JCM 4656, NBRC 12895, RIA 1123, SC 2388, BCRC 13768, CGMCC 4.1459, KCTC 9035, LMG 19340, NBIMCC 2208, NCIMB 12816, NRRL B-2371, RIA 831, VKM Ac-1224 |
[Ref.: #84515] |
SI-ID 13350
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Literature: |
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Topic |
Title |
Authors |
Journal |
DOI |
Year |
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Biotechnology |
Enhancing the production of amphotericin B by Strepyomyces nodosus in a 50-ton bioreactor based on comparative genomic analysis. |
Huang K, Zhang B, Chen Y, Wu ZM, Liu ZQ, Zheng YG |
3 Biotech |
10.1007/s13205-021-02844-2 |
2021 |
* |
Transcriptome |
Comparative Transcriptome Analysis of Streptomyces nodosus Mutant With a High-Yield Amphotericin B. |
Huang K, Zhang B, Chen Y, Liu ZQ, Zheng YG |
Front Bioeng Biotechnol |
10.3389/fbioe.2020.621431 |
2021 |
* |
Metabolism |
Enhanced amphotericin B production by genetically engineered Streptomyces nodosus. |
Huang K, Zhang B, Shen ZY, Cai X, Liu ZQ, Zheng YG |
Microbiol Res |
10.1016/j.micres.2020.126623 |
2020 |
* |
Enzymology |
Amphotericin biosynthesis in Streptomyces nodosus: deductions from analysis of polyketide synthase and late genes. |
Caffrey P, Lynch S, Flood E, Finnan S, Oliynyk M |
Chem Biol |
10.1016/s1074-5521(01)00046-1 |
2001 |
* |
Transcriptome |
Molecular cloning and comparative sequence analyses of rRNA operons in Streptomyces nodosus ATCC 14899. |
Yap WH, Wang Y |
Gene |
10.1016/s0378-1119(99)00112-2 |
1999 |
* |
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- References
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#9320 |
Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ;
DSM 40109
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#66794 |
Antje Chang, Lisa Jeske, Sandra Ulbrich, Julia Hofmann, Julia Koblitz, Ida Schomburg, Meina Neumann-Schaal, Dieter Jahn, Dietmar Schomburg:
BRENDA, the ELIXIR core data resource in 2021: new developments and updates.
Nucleic Acids Res. 49:
D498 - D508
2020 (
DOI 10.1093/nar/gkaa1025 , PubMed 33211880 )
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#67770 |
Japan Collection of Microorganism (JCM) ; Curators of the JCM;
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#68368 |
Automatically annotated from API 20E .
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#84515 |
Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.:
StrainInfo: A central database for resolving microbial strain identifiers
.
(
DOI 10.60712/SI-ID13350.1 )
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- * These data were automatically processed and therefore are not curated
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