Name: Streptomyces mutabilis DSM 40169
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 15418

Type strain:

Species: Streptomyces mutabilis

Culture col. no.: DSM 40169, ATCC 19789, ATCC 19919, CBS 541.68, IFO 12800, IMET 43509, INA B-472, ISP 5169, JCM 4400, KCC S-0400, NBRC 12800, NRRL ISP-5169, RIA 1068, VKM Ac-1851, BCRC 13715, CGMCC 4.1978, HAMBI 1069, MTCC 1393

Strain history: KCC S-0400 <-- IFO 12800 <-- SAJ <-- ISP 5169 <-- T. P. Preobrazhenskaya INA B-472.

NCBI tax ID(s): 67332 (species)

SI-ID 265703

ATCC 19919, ATCC 19789, IFO 12800, DSM 40169, JCM 4400, VKM Ac-1851, CBS 541.68, CBS 215.62, IMET 43509, NBRC 12800, NRRL ISP-5169, HAMBI 1069, BCRC 13715, CCRC 13715, CGMCC 4.1978

Other strains from Streptomyces mutabilis

S. mutabilis ST028269(HKI), A89/2.1, FSU-3938, ...

Section

Streptomyces mutabilis DSM 40169 is a spore-forming bacterium that was isolated from soil.

spore-forming
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Actinomycetota*
	Class	*Actinomycetes*
	Order	*Kitasatosporales*
	Family	*Streptomycetaceae*
	Genus	*Streptomyces*
	Species	**Streptomyces mutabilis**
	Full Scientific Name (LPSN)	Streptomyces mutabilis (Preobrazhenskaya and Ryabova 1957) Pridham et al. 1958 (Approved Lists 1980)

	Synonym	"Actinomyces* mutabilis"*
	Synonym	Streptomyces luteus

Information on morphological and physiological properties Morphology

[Ref.: #69480]	Gram stain	positive Confidence in %90.162

[Ref.: #69480]	Motility	no Confidence in %94.043

Information on culture and growth conditions Culture and growth conditions

[Ref.: #9364]

Culture medium

GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)

[Ref.: #9364]

Culture medium growth

[Ref.: #9364]

Culture medium link

Medium recipe at MediaDive

[Ref.: #9364]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #9364]			growth	28 °C
[Ref.: #67770]			growth	28 °C

Information on physiology and metabolism Physiology and metabolism

[Ref.: #69480]

Ability of spore formation

yes Confidence in %97.047

[Ref.: #20216]	Name of produced compound	Antibiotic agent
[Ref.: #20216]	Name of produced compound	Antifungal agent

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #9364]	Sample type/isolated from	soil
[Ref.: #9364]	Geographic location (country and/or sea, region)	ASSR
* marker position based on {}

Isolation sources categories

#Environmental

#Terrestrial

#Soil

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence KC954557 (>99% sequence identity) for Streptomyces from Microbeatlas

Aquatic Samples
Soil Samples	12
Animal Samples	16
Plant Samples
Total Samples	28

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #9364]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #20218]	Streptomyces mutabilis strain DSM 40169 16S ribosomal RNA gene, partial sequence	KC954557	1347	GenBank ENA	67332 tax ID	*
[Ref.: #20218]	Streptomyces mutabilis strain NRRL ISP-5169 16S ribosomal RNA gene, partial sequence	EF178679	1484	GenBank ENA	67332 tax ID	*
[Ref.: #20218]	Streptomyces olivoverticillatus gene for 16S ribosomal RNA, partial sequence, strain: JCM 4400	D44007	120	GenBank ENA	66427 tax ID	*
[Ref.: #20218]	Streptomyces mutabilis gene for 16S ribosomal RNA, partial sequence, strain: JCM 4400	D44115	121	GenBank ENA	67332 tax ID	*
[Ref.: #20218]	Streptomyces mutabilis gene for 16S rRNA, partial sequence, strain: NBRC 12800	AB184156	1472	GenBank ENA	67332 tax ID	*

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Streptomyces mutabilis JCM 4400	GCA_014649815	scaffold	GenBank ENA	67332 tax ID
[Ref.: #66792]	Streptomyces mutabilis strain JCM 4400	67332.5	wgs	PATRIC	67332 tax ID	*

[Ref.: #67770]

GC-content

70.7 mol%

genome sequence analysis

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Streptomyces mutabilis strain JCM 4400 PATRIC: 67332.5
[Ref.: #69480]	gram-positive	yes	90.162	no
[Ref.: #69480]	anaerobic	no	99.258	no
[Ref.: #69480]	halophile	no	90.348	no
[Ref.: #69480]	spore-forming	yes	97.047	no
[Ref.: #69480]	glucose-util	yes	88.949	no
[Ref.: #69480]	thermophile	no	97.943	yes
[Ref.: #69480]	flagellated	no	97.832	no
[Ref.: #69480]	motile	no	94.043	no
[Ref.: #69480]	aerobic	yes	94.914	no
[Ref.: #69480]	glucose-ferment	no	87.701	no

Availability in culture collections External links

[Ref.: #9364]

Culture collection no.

DSM 40169, ATCC 19789, ATCC 19919, CBS 541.68, IFO 12800, IMET 43509, INA B-472, ISP 5169, JCM 4400, KCC S-0400, NBRC 12800, NRRL ISP-5169, RIA 1068, VKM Ac-1851, BCRC 13715, CGMCC 4.1978, HAMBI 1069, MTCC 1393

[Ref.: #84506]

SI-ID 265703

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Streptomyces luteus sp. nov., an actinomycete isolated from soil.	Luo XX, Kai L, Wang Y, Wan CX, Zhang LL	Int J Syst Evol Microbiol	10.1099/ijsem.0.001611	2017	*
Phylogeny	Activity of 2,4-Di-tert-butylphenol produced by a strain of Streptomyces mutabilis isolated from a Saharan soil against Candida albicans and other pathogenic fungi.	Belghit S, Driche EH, Bijani C, Zitouni A, Sabaou N, Badji B, Mathieu F	J Mycol Med	10.1016/j.mycmed.2016.03.001	2016	*
Phylogeny	Antifungal properties of an actinomycin D-producing strain, Streptomyces sp. IA1, isolated from a Saharan soil.	Toumatia O, Yekkour A, Goudjal Y, Riba A, Coppel Y, Mathieu F, Sabaou N, Zitouni A	J Basic Microbiol	10.1002/jobm.201400202	2014	*
Phylogeny	Biocontrol of Rhizoctonia solani damping-off and promotion of tomato plant growth by endophytic actinomycetes isolated from native plants of Algerian Sahara.	Goudjal Y, Toumatia O, Yekkour A, Sabaou N, Mathieu F, Zitouni A	Microbiol Res	10.1016/j.micres.2013.06.014	2013	*

References

#9364

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 40169

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#20216

Leibniz-Institut für Naturstoff-Forschung und Infektionsbiologie e. V. Hans-Knöll-Institut (HKI) Curators of the HKI: Collection Description Leibniz-Institut für Naturstoff-Forschung und Infektionsbiologie e. V. Hans-Knöll-Institut (HKI) .

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#84506

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID265703.1 )

* These data were automatically processed and therefore are not curated

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Streptomyces mutabilis strain JCM 4400

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