Streptomyces misionensis (DSM 40306, ATCC 14991, ATCC 25475)

Name: Streptomyces misionensis (DSM 40306, ATCC 14991, ATCC 25475)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 15414

Type strain

Strain Designation INTA 3944

Culture col. no. DSM 40306 ATCC 14991 ATCC 25475 CBS 885.69 IFO 13063 11 more

NCBI tax ID(s) 1306177 67331

Special Collections DSMZ JCM

History DSMZ <- E.B. Shirling, ISP <- I.L. Calot and A.P. Cercos, INTA, 3944 JCM <-- KCC S-0497 <-- IFO 13063 <-- SAJ <-- ISP 5306 <-- I. L. Calot and A. P. Cercós 3944.

Links

Streptomyces misionensis INTA 3944 is a bacterium that was isolated from soil.

genome sequence 16S sequence Bacteria

Name and taxonomic classification

SI-ID 92371

ATCC 14991,ATCC 25475,IFO 13063,DSM 40306,JCM 4497,CCRC 12094,NRRL B-3230,VKM Ac-626,NCIMB 12979,CBS 885.69,NBRC 13063,BCRC 12094,CGMCC 4.1982

@ref 20215

Last LPSN update 2026-05-29 08:28:32

Domain Bacteria

Phylum Actinomycetota

Class Actinomycetes

Order Kitasatosporales

Family Streptomycetaceae

Genus Streptomyces

Species Streptomyces misionensis

Full scientific name Streptomyces misionensis Cercós et al. 1962 (Approved Lists 1980)

Morphology

Cell morphology

@ref	Motility	Confidence	Gram stain
125439		91.008
125439		98.554	positive

Culture and growth conditions

Culture medium

@ref	Name	Growth	Medium link	Composition
9447	GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)		Medium recipe at MediaDive	Name: GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) Composition: Agar 18.0 g/l Malt extract 10.0 g/l Yeast extract 4.0 g/l Glucose 4.0 g/l CaCO3 2.0 g/l Distilled water

Culture temp

@ref	Growth	Type	Temperature (°C)
9447	positive	growth	28
67770	positive	growth	28

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
125439	obligate aerobe	97.392

Compound production

@ref	Compound
9447	misionin
67770	Misionin

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Environmental	#Terrestrial	#Soil

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent
9447	soil
67770	Soil	Misiones	Argentina	ARG	Middle and South America

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
9447	1	Risk group (German classification) According to TRBA 466

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
67770	IMG-taxon 2634166373 annotated assembly for Streptomyces misionensis DSM 40306	contig	GCA_900104815	67331.3	2634166373	67331	78.35
66792	ASM131538v1 assembly for Streptomyces misionensis JCM 4497	contig	GCA_001315385	1306177.6	2734481985	1306177	0

16S sequences

@ref	Description	Accession	Length	NCBI tax ID
20218	Streptomyces misionensis gene for 16S ribosomal RNA, partial sequence, strain: JCM 4497	D44189	120	1306177
9447	Streptomyces misionensis strain NRRL B-3230 16S ribosomal RNA gene, partial sequence	EF178678	1485	1306177
9447	Streptomyces misionensis gene for 16S rRNA, partial sequence, strain: NBRC 13063	AB184285	1474	1306177
9447	Streptomyces misionensis JCM 4497 16S ribosomal RNA, partial sequence	NR_044138	1485	1306177

GC content

@ref	GC-content (mol%)	Method
67770	72.4	genome sequence analysis

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: IMG-taxon 2634166373 annotated assembly for Streptomyces misionensis DSM 40306
NCBI: GCA_900104815

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	gram_stain	BacteriaNetⓘ	positive	98.55	no
125439	oxygen_tolerance	BacteriaNetⓘ	obligate aerobe	97.39	no
125439	motility	BacteriaNetⓘ	no	91.01	no
125439	spore_formation	BacteriaNetⓘ	yes	80.70	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Streptomyces misionensis JCM 4497
PATRIC: 1306177.6

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	yes	81.23	no
125438	anaerobic	anaerobicⓘ	no	91.92	no
125438	spore-forming	spore-formingⓘ	yes	75.02	no
125438	aerobic	aerobicⓘ	yes	83.96	no
125438	thermophilic	thermophileⓘ	no	94.09	yes
125438	flagellated	motile2+ⓘ	no	88.50	no

Literature

Topic	Title	Authors	Journal	DOI	Year
	Draft Genomic Sequences of Streptomyces misionensis ACT66 and Streptomyces albidoflavus ACT77, Bacteria with Potential Application for Phytopathogen Biocontrol.	Pylro VS, Dias ACF, Andreote FD, Varani AM, Andreote CCF, Ribeiro IAF, Kitano IT, Bernardo ERA.	Microbiol Resour Announc	10.1128/mra.00949-19	2019
Genetics	Data on DNA-seq analysis of Endophytic Streptomyces sp. SUK 48.	Ahmad SJ, Zin NM.	Data Brief	10.1016/j.dib.2021.106768	2021
Genetics	Atropopeptides are a Novel Family of Ribosomally Synthesized and Posttranslationally Modified Peptides with a Complex Molecular Shape.	Nanudorn P, Thiengmag S, Biermann F, Erkoc P, Dirnberger SD, Phan TN, Furst R, Ueoka R, Helfrich EJN.	Angew Chem Int Ed Engl	10.1002/anie.202208361	2022
Enzymology	Draft genome sequence of Streptomyces sp. strain F1, a potential source for glycoside hydrolases isolated from Brazilian soil.	Melo RR, Persinoti GF, Paixao DAA, Squina FM, Ruller R, Sato HH.	Braz J Microbiol	10.1016/j.bjm.2016.11.010	2017
	Polyene-Producing Streptomyces spp. From the Fungus-Growing Termite Macrotermes barneyi Exhibit High Inhibitory Activity Against the Antagonistic Fungus Xylaria.	Li J, Sang M, Jiang Y, Wei J, Shen Y, Huang Q, Li Y, Ni J.	Front Microbiol	10.3389/fmicb.2021.649962	2021
Metabolism	Streptomyces misionensis PESB-25 produces a thermoacidophilic endoglucanase using sugarcane bagasse and corn steep liquor as the sole organic substrates.	Franco-Cirigliano MN, Rezende Rde C, Gravina-Oliveira MP, Pereira PH, do Nascimento RP, Bon EP, Macrae A, Coelho RR.	Biomed Res Int	10.1155/2013/584207	2013
Genetics	Revealing the Existence of Diverse Strategies for Phosphorus Solubilization and Acquisition in Plant-Growth Promoting Streptomyces misionensis SwB1.	Chen Y, Gao Z, Yang Y, Liu Q, Jiang L, Chen J, Zhou X, Zhang L, Ji Y, Tu J, Xiao Z, Li P, Li C.	Microorganisms	10.3390/microorganisms13020378	2025
	Antimicrobial potential of actinomycetes from high altitude Nepalese soils.	Aryal S, Adhikari R, Regmi B, Joshi DR.	Sci Rep	10.1038/s41598-025-09357-5	2025
	Biological control of Paecilomyces formosus, the causal agent of dieback and canker diseases of pistachio by two strains of Streptomyces misionensis	Torabi A, Shahidi Bonjar GH, Abdolshahi R, Pournamdari M, Saadoun I, Barka EA.	Biol Control		2019
	Isolation, Characterization and Chemical Synthesis of Large Spectrum Antimicrobial Cyclic Dipeptide (l-leu-l-pro) from Streptomyces misionensisV16R3Y1 Bacteria Extracts. A Novel ¹H NMR Metabolomic Approach.	Saadouli I, Zendah El Euch I, Trabelsi E, Mosbah A, Redissi A, Ferjani R, Fhoula I, Cherif A, Sabatier JM, Sewald N, Ouzari HI.	Antibiotics (Basel)	10.3390/antibiotics9050270	2020
Enzymology	Streptenols F-I Isolated from the Marine-Derived Streptomyces misionensis BAT-10-03-023.	Tarazona G, Schleissner C, Rodriguez P, Perez M, Canedo LM, Cuevas C.	J Nat Prod	10.1021/acs.jnatprod.6b01057	2017
	Impact of altitudinal variations on plant growth dynamics, nutritional composition, and free living rhizospheric N₂ fixing bacterial community of Eruca sativa.	Kumar N, Kaur B, Sharma D, Korpole S, Shukla S, Bhardwaj P, Patel MK, Acharya S, Khatri M, Saxena S.	Sci Rep	10.1038/s41598-025-98242-2	2025
Pathogenicity	Evaluation of Nematicidal Activity of Streptomyces yatensis KRA-28 against Meloidogyne incognita.	Park EJ, Jang HJ, Park CS, Lee SJ, Lee S, Kim KH, Yun BS, Lee SW, Rho MC.	J Microbiol Biotechnol	10.4014/jmb.1908.08038	2020
	Potential Role of Biocontrol Agents for Sustainable Management of Fungal Pathogens Causing Canker and Fruit Rot of Pistachio in Italy.	Gusella G, Vitale A, Polizzi G.	Pathogens	10.3390/pathogens11080829	2022
	Oligomycin-producing Streptomyces sp. newly isolated from Swiss soils efficiently protect Arabidopsis thaliana against Botrytis cinerea.	Louviot F, Abdelrahman O, Abou-Mansour E, L'Haridon F, Allard P-M, Falquet L, Weisskopf L.	mSphere	10.1128/msphere.00667-23	2024
	Targeting Streptomyces-Derived Streptenol Derivatives against Gynecological Cancer Target PIK3CA: An In Silico Approach.	Jemmy Christy H, Vasudevan S, Sudha S, Kandeel M, Subramanian K, Pugazhvendan SR, Ronald Ross P, Velmurugan.	Biomed Res Int	10.1155/2022/6600403	2022
	Identification of fungal lignocellulose-degrading biocatalysts secreted by Phanerochaete chrysosporium via activity-based protein profiling.	Schmerling C, Sewald L, Heilmann G, Witfeld F, Begerow D, Jensen K, Brasen C, Kaschani F, Overkleeft HS, Siebers B, Kaiser M.	Commun Biol	10.1038/s42003-022-04141-x	2022
Pathogenicity	Mangrove derived Streptomyces sp. MUM265 as a potential source of antioxidant and anticolon-cancer agents.	Tan LT, Chan KG, Pusparajah P, Yin WF, Khan TM, Lee LH, Goh BH.	BMC Microbiol	10.1186/s12866-019-1409-7	2019
Phenotype	Screening and Purification of Natural Products from Actinomycetes that Induce a "Rounded" Morphological Phenotype in Fission Yeast.	Lewis RA, Devi J, Green K, Li J, Hopkins A, Hayles J, Nurse P, Errington J, Allenby NEE.	Nat Prod Bioprospect	10.1007/s13659-021-00304-1	2021
	Antifungal Streptomyces spp. Associated with the Infructescences of Protea spp. in South Africa.	Human ZR, Moon K, Bae M, de Beer ZW, Cha S, Wingfield MJ, Slippers B, Oh DC, Venter SN.	Front Microbiol	10.3389/fmicb.2016.01657	2016
Enzymology	Screening and purification of natural products from actinomycetes that affect the cell shape of fission yeast.	Lewis RA, Li J, Allenby NEE, Errington J, Hayles J, Nurse P.	J Cell Sci	10.1242/jcs.194571	2017
Genetics	Genome-Based Taxonomic Classification of the Phylum Actinobacteria.	Nouioui I, Carro L, Garcia-Lopez M, Meier-Kolthoff JP, Woyke T, Kyrpides NC, Pukall R, Klenk HP, Goodfellow M, Goker M.	Front Microbiol	10.3389/fmicb.2018.02007	2018
	Apis andreniformis associated Actinomycetes show antimicrobial activity against black rot pathogen (Xanthomonas campestris pv. campestris).	Promnuan Y, Promsai S, Pathom-Aree W, Meelai S	PeerJ	10.7717/peerj.12097	2021
	Antioxidant activity and free radical scavenging activities of Streptomyces sp. strain MJM 10778.	Lee DR, Lee SK, Choi BK, Cheng J, Lee YS, Yang SH, Suh JW	Asian Pac J Trop Med	10.1016/S1995-7645(14)60170-X	2014
Phylogeny	Acidophilic actinomycetes from rhizosphere soil: diversity and properties beneficial to plants.	Poomthongdee N, Duangmal K, Pathom-aree W	J Antibiot (Tokyo)	10.1038/ja.2014.117	2014
	Streptomyces macrolidinus sp. nov., a novel soil actinobacterium with potential anticancer and antimalarial activity.	Kanchanasin P, Sripreechasak P, Suriyachadkun C, Supong K, Pittayakhajonwut P, Somphong A, Tanasupawat S, Phongsopitanun W.	Int J Syst Evol Microbiol	10.1099/ijsem.0.005682	2023
Phylogeny	Streptomyces cupreus sp. nov., an antimicrobial producing actinobacterium isolated from Himalayan soil.	Maiti PK, Mandal S	Arch Microbiol	10.1007/s00203-020-02160-y	2021
Phylogeny	Streptomyces lichenis sp. nov., isolated from lichen.	Saeng-In P, Phongsopitanun W, Savarajara A, Tanasupawat S	Int J Syst Evol Microbiol	10.1099/ijsem.0.003052	2018
Phylogeny	Streptomyces venetus sp. nov., an actinomycete with a blue aerial mycelium.	Sujarit K, Kudo T, Ohkuma M, Pathom-Aree W, Lumyong S	Int J Syst Evol Microbiol	10.1099/ijsem.0.002995	2018
Phylogeny	Streptomyces colonosanans sp. nov., A Novel Actinobacterium Isolated from Malaysia Mangrove Soil Exhibiting Antioxidative Activity and Cytotoxic Potential against Human Colon Cancer Cell Lines.	Law JW, Ser HL, Duangjai A, Saokaew S, Bukhari SI, Khan TM, Ab Mutalib NS, Chan KG, Goh BH, Lee LH	Front Microbiol	10.3389/fmicb.2017.00877	2017
Phylogeny	Streptomyces malaysiense sp. nov.: A novel Malaysian mangrove soil actinobacterium with antioxidative activity and cytotoxic potential against human cancer cell lines.	Ser HL, Palanisamy UD, Yin WF, Chan KG, Goh BH, Lee LH	Sci Rep	10.1038/srep24247	2016

References

#9447	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 40306
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#20218	Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Streptomyces misionensis (DSM 40306, ATCC 14991, ATCC 25475)

Name and taxonomic classification

Morphology

Cell morphology

Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Oxygen tolerance

Compound production

Isolation, sampling and environmental information

Isolation source categories

Isolation

Interaction and safety

Risk assessment

Sequence information

Genome sequences

Genome browser: GCA_900104815

16S sequences

GC content

Genome-based predictions

Predictions

Literature

Literature

References

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