Name: Streptomyces misionensis INTA 3944
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 15414

Type strain:

Species: Streptomyces misionensis

Strain Designation: INTA 3944

Culture col. no.: DSM 40306, ATCC 14991, ATCC 25475, CBS 885.69, IFO 13063, ISP 5306, JCM 4497, KCC S-0497, NBRC 13063, NRRL B-3230, RIA 1255, VKM Ac-626, BCRC 12094, CGMCC 4.1982, NCIMB 12979

Strain history: KCC S-0497 <-- IFO 13063 <-- SAJ <-- ISP 5306 <-- I. L. Calot and A. P. Cercós 3944.

NCBI tax ID(s): 1306177 (strain), 67331 (species)

SI-ID 92371

ATCC 14991, ATCC 25475, IFO 13063, DSM 40306, JCM 4497, CCRC 12094, NRRL B-3230, VKM Ac-626, NCIMB 12979, CBS 885.69, NBRC 13063, BCRC 12094, CGMCC 4.1982

Section

Streptomyces misionensis INTA 3944 is a spore-forming, mesophilic, Gram-positive bacterium that was isolated from soil.

Gram-positive
spore-forming
mesophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Actinomycetota*
	Class	*Actinomycetes*
	Order	*Kitasatosporales*
	Family	*Streptomycetaceae*
	Genus	*Streptomyces*
	Species	**Streptomyces misionensis**
	Full Scientific Name (LPSN)	Streptomyces misionensis Cercos et al. 1962 (Approved Lists 1980)

Information on morphological and physiological properties Morphology

[Ref.: #69480]	Gram stain	positive Confidence in %100

Information on culture and growth conditions Culture and growth conditions

[Ref.: #9447]

Culture medium

GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)

[Ref.: #9447]

Culture medium growth

[Ref.: #9447]

Culture medium link

Medium recipe at MediaDive

[Ref.: #9447]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #9447]			growth	28 °C
[Ref.: #67770]			growth	28 °C

[Ref.: #9447]	Temperature range	mesophilic
[Ref.: #67770]	Temperature range	mesophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #69481]

Ability of spore formation

yes Confidence in %100

[Ref.: #9447]	Name of produced compound	misionin
[Ref.: #67770]	Name of produced compound	Misionin

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #9447]	Sample type/isolated from	soil

[Ref.: #67770]	Sample type/isolated from	Soil
[Ref.: #67770]	Geographic location (country and/or sea, region)	Misiones
[Ref.: #67770]	Country	Argentina
[Ref.: #67770]	Country ISO 3 Code	ARG
[Ref.: #67770]	Continent	Middle and South America
* marker position based on {}

Isolation sources categories

#Environmental

#Terrestrial

#Soil

What are isolation sources categories?

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #9447]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #9447]	Streptomyces misionensis strain NRRL B-3230 16S ribosomal RNA gene, partial sequence	EF178678	1485	ENA	1306177 tax ID
[Ref.: #9447]	Streptomyces misionensis gene for 16S rRNA, partial sequence, strain: NBRC 13063	AB184285	1474	ENA	1306177 tax ID
[Ref.: #9447]	Streptomyces misionensis JCM 4497 16S ribosomal RNA, partial sequence	NR_044138	1485	GenBank	1306177 tax ID
[Ref.: #20218]	Streptomyces misionensis gene for 16S ribosomal RNA, partial sequence, strain: JCM 4497	D44189	120	ENA	1306177 tax ID	*

Genome sequence information:

Only first 5 entries are displayed. Click here to see all.

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Streptomyces misionensis DSM 40306	GCA_900104815	contig	GenBank	67331 tax ID
[Ref.: #66792]	Streptomyces misionensis JCM 4497	GCA_001315385	contig	GenBank	1306177 tax ID	*
[Ref.: #66792]	Streptomyces misionensis JCM 4497	1306177.6	wgs	PATRIC	1306177 tax ID	*
[Ref.: #66792]	Streptomyces misionensis strain DSM 40306	67331.3	wgs	PATRIC	67331 tax ID	*
[Ref.: #66792]	Streptomyces misionensis DSM 40306	2634166373	draft	JGI IMG/M	67331 tax ID	*
[Ref.: #66792]	Streptomyces misionensis JCM 4497	2734481985	draft	JGI IMG/M	1306177 tax ID	*

[Ref.: #67770]

GC-content

72.4 mol%

genome sequence analysis

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from GenomeNet Sporulation v. 1 based on: Streptomyces misionensis JCM 4497 PATRIC: 1306177.6
[Ref.: #69481]	spore-forming	yes	100	no

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Streptomyces misionensis JCM 4497 PATRIC: 1306177.6
[Ref.: #69480]	motile	no	92.45	no
[Ref.: #69480]	gram-positive	yes	89.378	no
[Ref.: #69480]	anaerobic	no	98.423	no
[Ref.: #69480]	halophile	no	90.56	no
[Ref.: #69480]	spore-forming	yes	71.386	no
[Ref.: #69480]	thermophile	no	95.084	yes
[Ref.: #69480]	glucose-util	yes	86.838	no
[Ref.: #69480]	aerobic	yes	94.401	no
[Ref.: #69480]	flagellated	no	97.573	no
[Ref.: #69480]	glucose-ferment	no	91.919	no

Availability in culture collections External links

[Ref.: #9447]

Culture collection no.

DSM 40306, ATCC 14991, ATCC 25475, CBS 885.69, IFO 13063, ISP 5306, JCM 4497, KCC S-0497, NBRC 13063, NRRL B-3230, RIA 1255, VKM Ac-626, BCRC 12094, CGMCC 4.1982, NCIMB 12979

[Ref.: #84503]

SI-ID 92371

Literature:

Only first 10 entries are displayed. Click here to see all.

	Title	Authors	Journal	DOI	Year
Phylogeny	Streptomyces cupreus sp. nov., an antimicrobial producing actinobacterium isolated from Himalayan soil.	Maiti PK, Mandal S	Arch Microbiol	10.1007/s00203-020-02160-y	2021	*
Phylogeny	Streptomyces lichenis sp. nov., isolated from lichen.	Saeng-In P, Phongsopitanun W, Savarajara A, Tanasupawat S	Int J Syst Evol Microbiol	10.1099/ijsem.0.003052	2018	*
Phylogeny	Streptomyces venetus sp. nov., an actinomycete with a blue aerial mycelium.	Sujarit K, Kudo T, Ohkuma M, Pathom-Aree W, Lumyong S	Int J Syst Evol Microbiol	10.1099/ijsem.0.002995	2018	*
Phylogeny	Streptomyces colonosanans sp. nov., A Novel Actinobacterium Isolated from Malaysia Mangrove Soil Exhibiting Antioxidative Activity and Cytotoxic Potential against Human Colon Cancer Cell Lines.	Law JW, Ser HL, Duangjai A, Saokaew S, Bukhari SI, Khan TM, Ab Mutalib NS, Chan KG, Goh BH, Lee LH	Front Microbiol	10.3389/fmicb.2017.00877	2017	*
Phylogeny	Streptomyces malaysiense sp. nov.: A novel Malaysian mangrove soil actinobacterium with antioxidative activity and cytotoxic potential against human cancer cell lines.	Ser HL, Palanisamy UD, Yin WF, Chan KG, Goh BH, Lee LH	Sci Rep	10.1038/srep24247	2016	*
Phylogeny	Acidophilic actinomycetes from rhizosphere soil: diversity and properties beneficial to plants.	Poomthongdee N, Duangmal K, Pathom-aree W	J Antibiot (Tokyo)	10.1038/ja.2014.117	2014	*
	Apis andreniformis associated Actinomycetes show antimicrobial activity against black rot pathogen (Xanthomonas campestris pv. campestris).	Promnuan Y, Promsai S, Pathom-Aree W, Meelai S	PeerJ	10.7717/peerj.12097	2021	*
	Antioxidant activity and free radical scavenging activities of Streptomyces sp. strain MJM 10778.	Lee DR, Lee SK, Choi BK, Cheng J, Lee YS, Yang SH, Suh JW	Asian Pac J Trop Med	10.1016/S1995-7645(14)60170-X	2014	*

References

#9447

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 40306

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69481

Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch: Predictions based on the model GenomeNet Sporulation v. 1 . ( DOI 10.21203/rs.3.rs-2527258/v1 )

#84503

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID92371.1 )

* These data were automatically processed and therefore are not curated

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Streptomyces misionensis JCM 4497

Streptomyces misionensis JCM 4497

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