Name: Streptomyces libani 2343 FI = IPV
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 15373

Type strain:

Species: Streptomyces libani

Strain Designation: 2343 FI = IPV

Culture col. no.: DSM 40555, ATCC 23732, CBS 753.72, DSM 41227, IFO 13452, ISP 5555, JCM 4322, JCM 4781, KCC S-0322, KCC S-0781, NBRC 13452, NRRL B-3446, RIA 1413, IPV 1945, BCRC 15196, KCTC 9113, NCAIM B.01474, NCIMB 11012, VKM Ac-1905

Strain history: KCC S-0322 <-- IPV 1945 <-- E. Baldacci 2343 FI.

NCBI tax ID(s): 68043 (species)

SI-ID 265434

ATCC 23732, IFO 13452, DSM 40555, DSM 41227, JCM 4322, JCM 4781, NRRL B-3446, NCIMB 11012, VKM Ac-1905, CBS 753.72, KCTC 9113, NBRC 13452, NCAIM B.01474, BCRC 15196, CCRC 15196, NCIB 11012

Section

Streptomyces libani 2343 FI = IPV is a spore-forming, mesophilic bacterium that produces antibiotic compounds and was isolated from soil.

antibiotic compound production
spore-forming
mesophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Actinomycetota*
	Class	*Actinomycetes*
	Order	*Kitasatosporales*
	Family	*Streptomycetaceae*
	Genus	*Streptomyces*
	Species	**Streptomyces libani**
	Full Scientific Name (LPSN)	Streptomyces libani Baldacci and Grein 1966 (Approved Lists 1980)

Information on morphological and physiological properties Morphology

[Ref.: #69480]	Gram stain	positive Confidence in %100

[Ref.: #69480]	Motility	no Confidence in %95.803

Multimedia content

[Ref.: #9638]

Caption:

Medium 65 28°C

[Ref.: #9638]

Intellectual property rights:

Information on culture and growth conditions Culture and growth conditions

[Ref.: #9638]

Culture medium

GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)

[Ref.: #9638]

Culture medium growth

[Ref.: #9638]

Culture medium link

Medium recipe at MediaDive

[Ref.: #9638]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #9638]			growth	28 °C
[Ref.: #67770]			growth	28 °C

[Ref.: #9638]	Temperature range	mesophilic
[Ref.: #67770]	Temperature range	mesophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #69481]	Ability of spore formation	yes Confidence in %100
[Ref.: #69480]	Ability of spore formation	yes Confidence in %100

[Ref.: #9638]	Name of produced compound	libanomycin
[Ref.: #67770]	Name of produced compound	Libanomycin

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #9638]	Sample type/isolated from	soil
[Ref.: #9638]	Geographic location (country and/or sea, region)	Biblos
[Ref.: #9638]	Country	Lebanon
[Ref.: #9638]	Country ISO 3 Code	LBN
[Ref.: #9638]	Continent	Asia

[Ref.: #67770]	Sample type/isolated from	Soil
[Ref.: #67770]	Country	Lebanon
[Ref.: #67770]	Country ISO 3 Code	LBN
[Ref.: #67770]	Continent	Asia
* marker position based on {}

Isolation sources categories

#Environmental

#Terrestrial

#Soil

What are isolation sources categories?

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #9638]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #20218]	Streptomyces libani subsp. libani strain DSM 40555 16S ribosomal RNA gene, partial sequence	HQ244464	1375	ENA	68044 tax ID	*
[Ref.: #20218]	Streptomyces libani subsp. libani gene for 16S rRNA, partial sequence	AB122726	565	ENA	68044 tax ID	*
[Ref.: #20218]	Streptomyces libani subsp. libani gene for 16S ribosomal RNA, partial sequence, strain: JCM 4781	D44357	121	ENA	68044 tax ID	*
[Ref.: #20218]	Streptomyces libani subsp. libani gene for 16S rRNA, partial sequence, strain: NBRC 13452	AB184414	1453	ENA	68044 tax ID	*
[Ref.: #20218]	Streptomyces libani subsp. libani strain NRRL B-3446T 16S ribosomal RNA gene, partial sequence	DQ442518	1499	ENA	68044 tax ID	*

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Streptomyces libani subsp. libani NBRC 13452	GCA_009811595	contig	GenBank	68044 tax ID
[Ref.: #66792]	Streptomyces libani subsp. libani JCM 4322	GCA_014649275	scaffold	GenBank	68044 tax ID	*
[Ref.: #66792]	Streptomyces libani subsp. libani strain JCM 4322	68044.4	wgs	PATRIC	68044 tax ID	*
[Ref.: #66792]	Streptomyces libani subsp. libani strain NBRC 13452	68044.3	wgs	PATRIC	68044 tax ID	*
[Ref.: #66792]	Streptomyces libani subsp. libani DSM 40555	GCA_027497475	complete	GenBank	68044 tax ID	*

[Ref.: #67770]

GC-content

71 mol%

genome sequence analysis

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from GenomeNet Sporulation v. 1 based on: Streptomyces libani subsp. libani strain NBRC 13452 PATRIC: 68044.3
[Ref.: #69481]	spore-forming	yes	100	no

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Streptomyces libani subsp. libani DSM 40555 NCBI: GCA_027497475.1
[Ref.: #69480]	flagellated	no	98.098	no
[Ref.: #69480]	gram-positive	yes	89.772	no
[Ref.: #69480]	anaerobic	no	99.125	no
[Ref.: #69480]	aerobic	yes	91.951	no
[Ref.: #69480]	halophile	no	88.608	no
[Ref.: #69480]	spore-forming	yes	95.959	no
[Ref.: #69480]	glucose-ferment	no	91.655	no
[Ref.: #69480]	thermophile	no	97.368	yes
[Ref.: #69480]	glucose-util	yes	91.26	no
[Ref.: #69480]	motile	no	92.844	no

Availability in culture collections External links

[Ref.: #9638]

Culture collection no.

DSM 40555, ATCC 23732, CBS 753.72, DSM 41227, IFO 13452, ISP 5555, JCM 4322, JCM 4781, KCC S-0322, KCC S-0781, NBRC 13452, NRRL B-3446, RIA 1413, IPV 1945, BCRC 15196, KCTC 9113, NCAIM B.01474, NCIMB 11012, VKM Ac-1905

[Ref.: #84463]

SI-ID 265434

References

#9638

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 40555

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69481

Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch: Predictions based on the model GenomeNet Sporulation v. 1 . ( DOI 10.21203/rs.3.rs-2527258/v1 )

#84463

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID265434.1 )

* These data were automatically processed and therefore are not curated

Change proposal

You found an error in BacDive? Please tell us about it!

Note that changes will be reviewed and judged. If your changes are legitimate, changes will occur within the next BacDive update. Only proposed changes supported by the according reference will be reviewed. The BacDive team reserves the right to reject proposed changes.

Search for species Streptomyces libani subsp. libani in external resources:
SILVA
BRENDA
PANGAEA
StrainInfo
GBIF

Streptomyces libani subsp. libani strain NBRC 13452

Streptomyces libani subsp. libani DSM 40555

Change proposal

Change proposal