Rothia dentocariosa (CCUG 49729)

Name: Rothia dentocariosa (CCUG 49729)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 153488

Type strain

Culture col. no. CCUG 49729

NCBI tax ID(s) 2047

Special Collections CCUG

Links

Rothia dentocariosa CCUG 49729 is a microaerophile bacterium that was isolated from Human cerebrospinal fluid.

microaerophile Bacteria

Name and taxonomic classification

SI-ID 214887

CCUG 49729

@ref 20215

Last LPSN update 2026-05-29 08:42:50

Domain Bacteria

Phylum Actinomycetota

Class Actinomycetes

Order Micrococcales

Family Micrococcaceae

Genus Rothia

Species Rothia dentocariosa

Full scientific name Rothia dentocariosa corrig. (Onishi 1949) Georg and Brown 1967 (Approved Lists 1980)

Synonyms (3)

"Nocardia dentocariosus"
Rothia dentocariosus
"Actinomyces dentocariosus"

BacDive ID	Other strains from **Rothia dentocariosa** (35)	Type strain
7779	R. dentocariosa XDIA, X599, DSM 43762, ATCC 17931, DSM 46363, ... (type strain)
138734	R. dentocariosa CIP 102480
143220	R. dentocariosa CCUG 17835
145026	R. dentocariosa CCUG 27465
145121	R. dentocariosa CCUG 27698
145454	R. dentocariosa CCUG 28582
145458	R. dentocariosa CCUG 28595
145961	R. dentocariosa CCUG 29965
145980	R. dentocariosa CCUG 30072
146267	R. dentocariosa CCUG 30754
146425	R. dentocariosa CCUG 31109
146918	R. dentocariosa CCUG 32449
147410	R. dentocariosa CCUG 33543
147679	R. dentocariosa CCUG 33996
148200	R. dentocariosa CCUG 35025
149424	R. dentocariosa CCUG 37703
149463	R. dentocariosa CCUG 37790
149654	R. dentocariosa CCUG 38132
149661	R. dentocariosa CCUG 38139
149665	R. dentocariosa CCUG 38143
150128	R. dentocariosa CCUG 39054
151025	R. dentocariosa CCUG 43070
151094	R. dentocariosa CCUG 43254
151236	R. dentocariosa CCUG 43520 C
152446	R. dentocariosa CCUG 46804
153179	R. dentocariosa CCUG 48652, ATCC BAA-907
153237	R. dentocariosa CCUG 48843
153570	R. dentocariosa CCUG 50219
153766	R. dentocariosa CCUG 50895
154483	R. dentocariosa CCUG 53793
154915	R. dentocariosa CCUG 55681
155471	R. dentocariosa CCUG 57823
155890	R. dentocariosa CCUG 59569
163858	R. dentocariosa JCM 3068, ATCC 14189, IAM 14774, IFM 1285, ...
174789	R. dentocariosa SB-286a1, DSM 112005

Morphology

Culture and growth conditions

Culture temp

@ref	Growth	Type	Temperature (°C)
58684	positive	growth	37

Physiology and metabolism

Oxygen tolerance

58684

Oxygen tolerancemicroaerophile

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
68381	40585 ChEBI	alpha-cyclodextrin	-	builds acid from	from API rID32STR
68375	22599 ChEBI	arabinose	-	fermentation	from API ID32STA
68381	29016 ChEBI	arginine	-	hydrolysis	from API rID32STR
68378	29016 ChEBI	arginine	-	hydrolysis	from API STA
68375	29016 ChEBI	arginine	-	hydrolysis	from API ID32STA
68375	17057 ChEBI	cellobiose	-	fermentation	from API ID32STA
68381	18333 ChEBI	D-arabitol	-	builds acid from	from API rID32STR
68378	15824 ChEBI	D-fructose	+	builds acid from	from API STA
68375	15824 ChEBI	D-fructose	+	fermentation	from API ID32STA
68379	17634 ChEBI	D-glucose	+	fermentation	from API Coryne
68378	17634 ChEBI	D-glucose	-	builds acid from	from API STA
68375	17634 ChEBI	D-glucose	+	fermentation	from API ID32STA
68381	16899 ChEBI	D-mannitol	-	builds acid from	from API rID32STR
68379	16899 ChEBI	D-mannitol	-	fermentation	from API Coryne
68378	16899 ChEBI	D-mannitol	+	builds acid from	from API STA
68375	16899 ChEBI	D-mannitol	-	fermentation	from API ID32STA
68378	16024 ChEBI	D-mannose	+	builds acid from	from API STA
68375	16024 ChEBI	D-mannose	+	fermentation	from API ID32STA
68381	16988 ChEBI	D-ribose	-	builds acid from	from API rID32STR
68379	16988 ChEBI	D-ribose	-	fermentation	from API Coryne
68375	16988 ChEBI	D-ribose	-	fermentation	from API ID32STA
68381	16443 ChEBI	D-tagatose	-	builds acid from	from API rID32STR
68379	65327 ChEBI	D-xylose	-	fermentation	from API Coryne
68378	65327 ChEBI	D-xylose	-	builds acid from	from API STA
68379	4853 ChEBI	esculin	+	hydrolysis	from API Coryne
68375	4853 ChEBI	esculin	+	hydrolysis	from API ID32STA
68379	5291 ChEBI	gelatin	-	hydrolysis	from API Coryne
68381	28087 ChEBI	glycogen	-	builds acid from	from API rID32STR
68379	28087 ChEBI	glycogen	-	fermentation	from API Coryne
68381	606565 ChEBI	hippurate	-	hydrolysis	from API rID32STR
68381	30849 ChEBI	L-arabinose	-	builds acid from	from API rID32STR
68381	17716 ChEBI	lactose	-	builds acid from	from API rID32STR
68379	17716 ChEBI	lactose	-	fermentation	from API Coryne
68378	17716 ChEBI	lactose	+	builds acid from	from API STA
68375	17716 ChEBI	lactose	-	fermentation	from API ID32STA
68381	17306 ChEBI	maltose	+	builds acid from	from API rID32STR
68379	17306 ChEBI	maltose	+	fermentation	from API Coryne
68375	17306 ChEBI	maltose	+	fermentation	from API ID32STA
68378	17306 ChEBI	maltose	+	builds acid from	from API STA
68381	6731 ChEBI	melezitose	-	builds acid from	from API rID32STR
68378	28053 ChEBI	melibiose	-	builds acid from	from API STA
68381	28053 ChEBI	melibiose	-	builds acid from	from API rID32STR
68378	320061 ChEBI	methyl alpha-D-glucopyranoside	+	builds acid from	from API STA
68381	320055 ChEBI	methyl beta-D-glucopyranoside	-	builds acid from	from API rID32STR
68375	59640 ChEBI	N-acetylglucosamine	-	fermentation	from API ID32STA
68378	59640 ChEBI	N-acetylglucosamine	-	builds acid from	from API STA
68379	17632 ChEBI	nitrate	-	reduction	from API Coryne
68378	17632 ChEBI	nitrate	-	reduction	from API STA
68375	17632 ChEBI	nitrate	-	reduction	from API ID32STA
68375	18257 ChEBI	ornithine	-	degradation	from API ID32STA
68381	27941 ChEBI	pullulan	-	builds acid from	from API rID32STR
68381	16634 ChEBI	raffinose	-	builds acid from	from API rID32STR
68378	16634 ChEBI	raffinose	-	builds acid from	from API STA
68375	16634 ChEBI	raffinose	-	fermentation	from API ID32STA
68381	30911 ChEBI	sorbitol	-	builds acid from	from API rID32STR
68381	17992 ChEBI	sucrose	+	builds acid from	from API rID32STR
68379	17992 ChEBI	sucrose	+	fermentation	from API Coryne
68375	17992 ChEBI	sucrose	+	fermentation	from API ID32STA
68378	17992 ChEBI	sucrose	-	builds acid from	from API STA
68381	27082 ChEBI	trehalose	+	builds acid from	from API rID32STR
68378	27082 ChEBI	trehalose	-	builds acid from	from API STA
68375	27082 ChEBI	trehalose	+	fermentation	from API ID32STA
68375	32528 ChEBI	turanose	-	fermentation	from API ID32STA
68381	16199 ChEBI	urea	-	hydrolysis	from API rID32STR
68379	16199 ChEBI	urea	-	hydrolysis	from API Coryne
68375	16199 ChEBI	urea	-	hydrolysis	from API ID32STA
68378	16199 ChEBI	urea	-	hydrolysis	from API STA
68378	17151 ChEBI	xylitol	-	builds acid from	from API STA

Antibiotic resistance

@ref	ChEBI	Group ID	Metabolite	Is sensitive	Sensitivity conc.
68378		0	lysostaphin			from API STA
68375	28368	0	novobiocin		1.8 µg	from API ID32STA

Metabolite production

@ref	Chebi-ID	Metabolite
68378	15688 ChEBI	acetoin	from API STA
68375	15688 ChEBI	acetoin	from API ID32STA
68381	15688 ChEBI	acetoin	from API rID32STR

Metabolite tests

@ref	Chebi-ID	Metabolite	Voges-proskauer-test
68381	15688 ChEBI	acetoin	-	from API rID32STR
68378	15688 ChEBI	acetoin	-	from API STA
68375	15688 ChEBI	acetoin	-	from API ID32STA

Enzymes

@ref	Value	Activity	Ec
68381	Alanyl-Phenylalanyl-Proline arylamidase	+		from API rID32STR
68381	alkaline phosphatase	-	3.1.3.1	from API rID32STR
68378	alkaline phosphatase	-	3.1.3.1	from API STA
68379	alkaline phosphatase	-	3.1.3.1	from API Coryne
68375	alkaline phosphatase	-	3.1.3.1	from API ID32STA
68381	alpha-galactosidase	-	3.2.1.22	from API rID32STR
68379	alpha-glucosidase	+	3.2.1.20	from API Coryne
68381	arginine dihydrolase	-	3.5.3.6	from API rID32STR
68378	arginine dihydrolase	-	3.5.3.6	from API STA
68375	arginine dihydrolase	-	3.5.3.6	from API ID32STA
68381	beta-galactosidase	-	3.2.1.23	from API rID32STR
68375	beta-galactosidase	-	3.2.1.23	from API ID32STA
68379	beta-galactosidase	-	3.2.1.23	from API Coryne
68381	beta-glucosidase	+	3.2.1.21	from API rID32STR
68375	beta-glucosidase	+	3.2.1.21	from API ID32STA
68379	beta-glucosidase	+	3.2.1.21	from API Coryne
68381	beta-glucuronidase	-	3.2.1.31	from API rID32STR
68375	beta-glucuronidase	-	3.2.1.31	from API ID32STA
68379	beta-glucuronidase	-	3.2.1.31	from API Coryne
68381	beta-mannosidase	-	3.2.1.25	from API rID32STR
68379	catalase	+	1.11.1.6	from API Coryne
68379	gelatinase	-		from API Coryne
68381	glycyl tryptophan arylamidase	-		from API rID32STR
68375	L-arginine arylamidase	-		from API ID32STA
68381	N-acetyl-beta-glucosaminidase	-	3.2.1.52	from API rID32STR
68379	N-acetyl-beta-glucosaminidase	-	3.2.1.52	from API Coryne
68375	ornithine decarboxylase	-	4.1.1.17	from API ID32STA
68379	pyrazinamidase	+	3.5.1.B15	from API Coryne
68381	pyrrolidonyl arylamidase	-	3.4.19.3	from API rID32STR
68375	pyrrolidonyl arylamidase	-	3.4.19.3	from API ID32STA
68379	pyrrolidonyl arylamidase	-	3.4.19.3	from API Coryne
68381	urease	-	3.5.1.5	from API rID32STR
68375	urease	-	3.5.1.5	from API ID32STA
68379	urease	-	3.5.1.5	from API Coryne
68378	urease	-	3.5.1.5	from API STA

Pathway annotation

Computationally determined by

@ref	pathway	enzyme coverage	annotated reactions
66794	enterobactin biosynthesis	100	3 of 3
66794	vitamin K metabolism	100	5 of 5
66794	cis-vaccenate biosynthesis	100	2 of 2
66794	ppGpp biosynthesis	100	4 of 4
66794	adipate degradation	100	2 of 2
66794	acetate fermentation	100	4 of 4
66794	acetoin degradation	100	3 of 3
66794	palmitate biosynthesis	100	22 of 22
66794	methylglyoxal degradation	100	5 of 5
66794	formaldehyde oxidation	100	3 of 3
66794	UDP-GlcNAc biosynthesis	100	3 of 3
66794	coenzyme A metabolism	100	4 of 4
66794	CDP-diacylglycerol biosynthesis	100	2 of 2
66794	teichoic acid biosynthesis	100	1 of 1
66794	anapleurotic synthesis of oxalacetate	100	1 of 1
66794	folate polyglutamylation	100	1 of 1
66794	denitrification	100	2 of 2
66794	chorismate metabolism	88.89	8 of 9
66794	heme metabolism	85.71	12 of 14
66794	pentose phosphate pathway	81.82	9 of 11
66794	peptidoglycan biosynthesis	80	12 of 15
66794	threonine metabolism	80	8 of 10
66794	cellulose degradation	80	4 of 5
66794	photosynthesis	78.57	11 of 14
66794	aspartate and asparagine metabolism	77.78	7 of 9
66794	valine metabolism	77.78	7 of 9
66794	molybdenum cofactor biosynthesis	77.78	7 of 9
66794	phenylalanine metabolism	76.92	10 of 13
66794	isoleucine metabolism	75	6 of 8
66794	glycogen biosynthesis	75	3 of 4
66794	6-hydroxymethyl-dihydropterin diphosphate biosynthesis	75	6 of 8
66794	flavin biosynthesis	73.33	11 of 15
66794	glycolysis	70.59	12 of 17
66794	CO2 fixation in Crenarchaeota	66.67	6 of 9
66794	NAD metabolism	66.67	12 of 18
66794	L-lactaldehyde degradation	66.67	2 of 3
66794	octane oxidation	66.67	2 of 3
66794	alanine metabolism	65.52	19 of 29
66794	tetrahydrofolate metabolism	64.29	9 of 14
66794	C4 and CAM-carbon fixation	62.5	5 of 8
66794	gluconeogenesis	62.5	5 of 8
66794	leucine metabolism	61.54	8 of 13
66794	vitamin B1 metabolism	61.54	8 of 13
66794	lipoate biosynthesis	60	3 of 5
66794	phenylacetate degradation (aerobic)	60	3 of 5
66794	glycogen metabolism	60	3 of 5
66794	non-pathway related	57.89	22 of 38
66794	methionine metabolism	57.69	15 of 26
66794	isoprenoid biosynthesis	57.69	15 of 26
66794	ubiquinone biosynthesis	57.14	4 of 7
66794	glutamate and glutamine metabolism	57.14	16 of 28
66794	purine metabolism	56.38	53 of 94
66794	degradation of sugar alcohols	56.25	9 of 16
66794	serine metabolism	55.56	5 of 9
66794	d-mannose degradation	55.56	5 of 9
66794	cysteine metabolism	55.56	10 of 18
66794	proline metabolism	54.55	6 of 11
66794	pyrimidine metabolism	53.33	24 of 45
66794	oxidative phosphorylation	51.65	47 of 91
66794	sulfopterin metabolism	50	2 of 4
66794	ketogluconate metabolism	50	4 of 8
66794	ethanol fermentation	50	1 of 2
66794	CMP-KDO biosynthesis	50	2 of 4
66794	butanoate fermentation	50	2 of 4
66794	vitamin E metabolism	50	2 of 4
66794	suberin monomers biosynthesis	50	1 of 2
66794	starch degradation	50	5 of 10
66794	glutathione metabolism	50	7 of 14
66794	phenylmercury acetate degradation	50	1 of 2
66794	Entner Doudoroff pathway	50	5 of 10
66794	lipid metabolism	48.39	15 of 31
66794	metabolism of disaccharids	45.45	5 of 11
66794	lysine metabolism	45.24	19 of 42
66794	reductive acetyl coenzyme A pathway	42.86	3 of 7
66794	citric acid cycle	42.86	6 of 14
66794	propanol degradation	42.86	3 of 7
66794	cardiolipin biosynthesis	42.86	3 of 7
66794	tryptophan metabolism	42.11	16 of 38
66794	degradation of aromatic, nitrogen containing compounds	41.67	5 of 12
66794	4-hydroxyphenylacetate degradation	40	4 of 10
66794	glycine betaine biosynthesis	40	2 of 5
66794	ethylmalonyl-CoA pathway	40	2 of 5
66794	arachidonate biosynthesis	40	2 of 5
66794	glycine metabolism	40	4 of 10
66794	dTDPLrhamnose biosynthesis	37.5	3 of 8
66794	arginine metabolism	37.5	9 of 24
66794	tyrosine metabolism	35.71	5 of 14
66794	bile acid biosynthesis, neutral pathway	35.29	6 of 17
66794	histidine metabolism	34.48	10 of 29
66794	acetyl CoA biosynthesis	33.33	1 of 3
66794	cyanate degradation	33.33	1 of 3
66794	selenocysteine biosynthesis	33.33	2 of 6
66794	degradation of hexoses	33.33	6 of 18
66794	glycolate and glyoxylate degradation	33.33	2 of 6
66794	IAA biosynthesis	33.33	1 of 3
66794	pantothenate biosynthesis	33.33	2 of 6
66794	(5R)-carbapenem carboxylate biosynthesis	33.33	1 of 3
66794	lipid A biosynthesis	33.33	3 of 9
66794	myo-inositol biosynthesis	30	3 of 10
66794	aclacinomycin biosynthesis	28.57	2 of 7
66794	d-xylose degradation	27.27	3 of 11
66794	dolichyl-diphosphooligosaccharide biosynthesis	27.27	3 of 11
66794	vitamin B6 metabolism	27.27	3 of 11
66794	ascorbate metabolism	27.27	6 of 22
66794	toluene degradation	25	1 of 4
66794	lactate fermentation	25	1 of 4
66794	cyclohexanol degradation	25	1 of 4
66794	androgen and estrogen metabolism	25	4 of 16
66794	biotin biosynthesis	25	1 of 4
66794	alginate biosynthesis	25	1 of 4
66794	urea cycle	23.08	3 of 13
66794	phosphatidylethanolamine bioynthesis	23.08	3 of 13
66794	nitrate assimilation	22.22	2 of 9
66794	degradation of pentoses	21.43	6 of 28

API coryne

@ref	Reduction of nitrateNIT	PYZ	PYRA	PAL	beta GUR	beta GAL	alpha GLU	beta NAG	ESC	URE	GEL	Control fermentationControl	GLU	RIB	XYL	MAN	MAL	LAC	SAC	GLYG	CAT
58684	-	+	-	-	-	-	+	-	+	-	-	-	+	-	-	-	+	-	+	-	+

API ID32STA

@ref	URE	ADH (Arg)	ODC	ESC	GLU	FRU	MNE	MAL	LAC	TRE	MAN	RAF	RIB	CEL	Reduction of nitrateNIT	Acetoin production (Voges Proskauer test)VP	beta GAL	L-arginine arylamidaseArgA	PAL	Pyrrolidonyl arylamidasePyrA	NOVO	SAC	NAG	TUR	ARA	beta GUR
58684	-	-	-	+	+	+	+	+	-	+	-	-	-	-	-	-	-	-	-	-	-	+	-	-	-	-

API rID32STR

@ref	ADH (Arg)	beta GLU	beta GAR	beta GUR	alpha GAL	PAL	RIB	MAN	SOR	LAC	TRE	RAF	SAC	LARA	DARL	Acid from alpha-cyclodextrinCDEX	Acetoin production (Voges Proskauer test)VP	Alanyl-Phenylalanyl-Proline arylamidaseAPPA	beta GAL	Pyrrolidonyl arylamidasePyrA	N-Acetyl-glucosaminidasebeta NAG	Glycyl-tryptophan arylamidaseGTA	HIP	GLYG	PUL	MAL	MEL	MLZ	Acidification of methyl beta-D-glucopyranosideMbeta DG	TAG	beta MAN	URE
58684	-	+	-	-	-	-	-	-	-	-	+	-	+	-	-	-	-	+	-	-	-	-	-	-	-	+	-	-	-	-	-	-

API STA

@ref	Control	GLU	FRU	MNE	MAL	LAC	TRE	MAN	XLT	MEL	Reduction of nitrateNIT	PAL	Acetoin production (Voges Proskauer test)VP	RAF	XYL	SAC	Acid from methyl-alpha-D-glucopyranosideMDG	NAG	ADH	URE	LSTR
58684	not determinedn.d.	-	+	+	+	+	-	+	-	-	-	-	-	-	-	-	+	-	-	-	-

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Host	#Human	-
#Host Body Product	#Fluids	#Cerebrospinal fluid
#Infection	#Patient	-

Isolation

@ref	Sample type	Host species	Sampling date	Geographic location	Country	Country ISO 3 Code	Continent
58684	Human cerebrospinal fluid	Homo sapiens	2004-09-01	Uppsala	Sweden	SWE	Europe

Interaction and safety

Sequence information

Genome-based predictions

Literature

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#58684	Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 49729
#66794	Antje Chang, Lisa Jeske, Sandra Ulbrich, Julia Hofmann, Julia Koblitz, Ida Schomburg, Meina Neumann-Schaal, Dieter Jahn, Dietmar Schomburg: BRENDA, the ELIXIR core data resource in 2021: new developments and updates. Nucleic Acids Res. 49: D498 - D508 2020 ( DOI 10.1093/nar/gkaa1025 , PubMed 33211880 )
#68375	Automatically annotated from API ID32STA .
#68378	Automatically annotated from API STA .
#68379	Automatically annotated from API Coryne .
#68381	Automatically annotated from API rID32STR .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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