Streptomyces lavendofoliae (DSM 40217, ATCC 15872, ATCC 23928)

Name: Streptomyces lavendofoliae (DSM 40217, ATCC 15872, ATCC 23928)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 15343

Type strain

Culture col. no. DSM 40217 ATCC 15872 ATCC 23928 CBS 912.68 IFO 12882 11 more

NCBI tax ID(s) 67314

Special Collections DSMZ JCM Wink compendium

History DSMZ <- E.B. Shirling, ISP <- N.A. Krassilnikov, INA JCM <-- KCC S-0391 <-- IFO 12882 <-- SAJ <-- ISP 5217 <-- INA 3613.

Links

Streptomyces lavendofoliae DSM 40217 is a bacterium that was isolated from soil.

genome sequence 16S sequence Bacteria

Name and taxonomic classification

SI-ID 36542

ATCC 15872,ATCC 23928,IFO 12882,DSM 40217,JCM 4391,NCIMB 9823,NRRL B-3371,VKM Ac-272,CBS 912.68,NBRC 12882,BCRC 13795,CCRC 13795,NCIB 9823,CGMCC 4.1891,LMG 19935

@ref 20215

Last LPSN update 2026-05-29 08:28:31

Domain Bacteria

Phylum Actinomycetota

Class Actinomycetes

Order Kitasatosporales

Family Streptomycetaceae

Genus Streptomyces

Species Streptomyces lavendofoliae

Full scientific name Streptomyces lavendofoliae (Kuchaeva et al. 1961) Pridham 1970 (Approved Lists 1980)

Synonyms (1)

"Actinomyces lavendofoliae"

Morphology

Cell morphology

@ref	Motility	Confidence	Gram stain
125439		93.898
125439		99.32	positive

Culture and growth conditions

Culture medium

@ref	Name	Growth	Medium link	Composition
9274	GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)		Medium recipe at MediaDive	Name: GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) Composition: Agar 18.0 g/l Malt extract 10.0 g/l Yeast extract 4.0 g/l Glucose 4.0 g/l CaCO3 2.0 g/l Distilled water

Culture temp

@ref	Growth	Type	Temperature (°C)
9274	positive	growth	28
18559	positive	optimum	28
67770	positive	growth	28

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
125438	aerobe	91.784
125439	obligate aerobe	98.589

Spore formation

@ref	Spore formation	Confidence
125439		91.819
125438		94.16

Compound production

9274

Compoundstreptothricin complex

Halophily

@ref	Salt	Growth	Tested relation	Concentration
18559	NaCl	positive	maximum	2.5 %

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
18559	22599 ChEBI	arabinose	+
68368	29016 ChEBI	arginine	+	hydrolysis	from API 20E
18559	62968 ChEBI	cellulose	-
68368	16947 ChEBI	citrate	+	assimilation	from API 20E
18559	28757 ChEBI	fructose	-
68368	5291 ChEBI	gelatin	+	hydrolysis	from API 20E
18559	17234 ChEBI	glucose	+
68368	25094 ChEBI	lysine	-	degradation	from API 20E
18559	29864 ChEBI	mannitol	-
18559	17268 ChEBI	myo-inositol	-
68368	18257 ChEBI	ornithine	-	degradation	from API 20E
18559	16634 ChEBI	raffinose	-
18559	26546 ChEBI	rhamnose	-
18559	17992 ChEBI	sucrose	-
68368	27897 ChEBI	tryptophan	-	energy source	from API 20E
68368	16199 ChEBI	urea	+	hydrolysis	from API 20E
18559	18222 ChEBI	xylose	+

Metabolite production

@ref	Chebi-ID	Metabolite
68368	15688 ChEBI	acetoin	from API 20E
68368	16136 ChEBI	hydrogen sulfide	from API 20E
68368	35581 ChEBI	indole	from API 20E

Metabolite tests

@ref	Chebi-ID	Metabolite	Voges-proskauer-test	Indole test
68368	15688 ChEBI	acetoin	-		from API 20E
68368	35581 ChEBI	indole		-	from API 20E

Enzymes

@ref	Value	Activity	Ec
68368	arginine dihydrolase	+	3.5.3.6	from API 20E
68368	beta-galactosidase	+	3.2.1.23	from API 20E
68368	gelatinase	+		from API 20E
68368	lysine decarboxylase	-	4.1.1.18	from API 20E
68368	ornithine decarboxylase	-	4.1.1.17	from API 20E
68368	tryptophan deaminase	+	4.1.99.1	from API 20E
68368	urease	+	3.5.1.5	from API 20E

API 20E

@ref	ONPG	ADH (Arg)	LDC (Lys)	ODC	CIT	H2S productionH2S	URE	TDA (Trp)	IND	Acetoin production (Voges Proskauer test)VP	GEL	GLU	MAN	INO	Sor	RHA	SAC	MEL	AMY	ARA	OX	Nitrite productionNO2	Reduction to N2N2	MotilityMOB	Growth on MacConkey mediumMAC	OF-O	OF-F
18559	+	+	-	-	+	-	+	+	-	-	+	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Environmental	#Terrestrial	#Soil

Isolation

@ref	Sample type	Country	Continent
9274	soil	USSR	Asia
67770	Soil

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
18559	1	German classification According to TRBA 466
9274	1	Risk group (German classification) According to TRBA 466

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
66792	ASM1464973v1 assembly for Streptomyces lavendofoliae JCM 4391	scaffold	GCA_014649735	67314.3	2989954672	67314	63.67

16S sequences

@ref	Description	Accession	Length	NCBI tax ID
20218	Streptomyces lavendofoliae gene for 16S ribosomal RNA, partial sequence, strain: JCM 4391	D44106	120	67314
20218	Streptomyces lavendofoliae 16S rRNA gene, type strain LMG 19935	AJ781336	1443	67314
20218	Streptomyces lavendofoliae gene for 16S rRNA, partial sequence, strain: NBRC 12882	AB184217	1476	67314
124043	Streptomyces lavendofoliae strain JCM 4391 16S ribosomal RNA gene, partial sequence.	MT760535	1334	67314

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: ASM1464973v1 assembly for Streptomyces lavendofoliae JCM 4391
BV-BRC: 67314.3

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	gram_stain	BacteriaNetⓘ	positive	99.32	no
125439	oxygen_tolerance	BacteriaNetⓘ	obligate aerobe	98.59	no
125439	motility	BacteriaNetⓘ	no	93.90	no
125439	spore_formation	BacteriaNetⓘ	yes	91.82	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Streptomyces lavendofoliae JCM 4391
NCBI: GCA_014649735.1

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	yes	88.38	no
125438	anaerobic	anaerobicⓘ	no	98.32	no
125438	aerobic	aerobicⓘ	yes	91.78	no
125438	spore-forming	spore-formingⓘ	yes	94.16	no
125438	thermophilic	thermophileⓘ	no	96.00	no
125438	flagellated	motile2+ⓘ	no	87.00	no

Literature

Topic	Title	Authors	Journal	DOI	Year
	A Coating Based on Bioactive Compounds from Streptomyces spp. and Chitosan Oligomers to Control Botrytis cinerea Preserves the Quality and Improves the Shelf Life of Table Grapes.	Buzon-Duran L, Sanchez-Hernandez E, Sanchez-Bascones M, Garcia-Gonzalez MC, Hernandez-Navarro S, Correa-Guimaraes A, Martin-Ramos P.	Plants (Basel)	10.3390/plants12030577	2023
	Applications of Natural Polymers in the Grapevine Industry: Plant Protection and Value-Added Utilization of Waste.	Toma Sardarescu DI, Manaila-Maximean D, Fierascu I, Baroi AM, Matei Brazdis RI, Fistos T, Chican IE, Fierascu RC.	Polymers (Basel)	10.3390/polym17010018	2024
	Rethinking Biosynthesis of Aclacinomycin A.	Xu Z, Tian P.	Molecules	10.3390/molecules28062761	2023
	Cancer killers in the human gut microbiota: diverse phylogeny and broad spectra.	Zhou YJ, Zhao DD, Liu H, Chen HT, Li JJ, Mu XQ, Liu Z, Li X, Tang L, Zhao ZY, Wu JH, Cai YX, Huang YZ, Wang PG, Jia YY, Liang PQ, Peng X, Chen SY, Yue ZL, Yuan XY, Lu T, Yao BQ, Li YG, Liu GR, Liu SL.	Oncotarget	10.18632/oncotarget.17319	2017
Metabolism	Novel aromatic polyketides from soil Streptomyces spp.: purification, characterization and bioactivity studies.	Bundale S, Begde D, Pillai D, Gangwani K, Nashikkar N, Kadam T, Upadhyay A.	World J Microbiol Biotechnol	10.1007/s11274-018-2448-1	2018
	Determination of absolute configuration of the phosphonic acid moiety of fosfazinomycins.	Schiessl K, Roller A, Hammerschmidt F.	Org Biomol Chem	10.1039/c3ob41574k	2013
	Pseudoceratonic Acid and Moloka'iamine Derivatives from the Red Sea Verongiid Sponge Pseudoceratina arabica.	Shaala LA, Youssef DTA.	Mar Drugs	10.3390/md18110525	2020
	Synthesis, 68Ga-radiolabeling, and preliminary in vivo assessment of a depsipeptide-derived compound as a potential PET/CT infection imaging agent.	Mokaleng BB, Ebenhan T, Ramesh S, Govender T, Kruger HG, Parboosing R, Hazari PP, Mishra AK, Marjanovic-Painter B, Zeevaart JR, Sathekge MM.	Biomed Res Int	10.1155/2015/284354	2015
	Streptomyces cyclosori sp. nov., a novel actinobacterium from the rhizosphere soil of Cyclosorus parasiticus (L.) Farw.	Gao R, Chen Y, Xiao Y, Gao J.	J Antibiot (Tokyo)	10.1038/s41429-025-00857-0	2025
	Streptomyces changanensis sp. nov. Isolated from Soil in China.	Wu H, Yu T, Bai G, Hao J, Han L.	Curr Microbiol	10.1007/s00284-023-03527-2	2023
Genetics	Streptomyces solincola sp. nov., isolated from soil in Malaysia.	Lee ZY, Ng ZY, Mohd Nor MN, Teo WFA, Tan GYA.	Int J Syst Evol Microbiol	10.1099/ijsem.0.005594	2022
Phylogeny	Streptomyces genisteinicus sp. nov., a novel genistein-producing actinomycete isolated from a Chinese medicinal plant and proposal of Streptomyces michiganensis Corbaz et al. 1957 as a later heterotypic synonym of Streptomyces xanthochromogenes Arishima et al. 1956.	Hu S, Li K, Wang Y, Guo Y, Zhou M, Tang X, Gao J	Int J Syst Evol Microbiol	10.1099/ijsem.0.004954	2021
Phylogeny	Streptomyces kanasensis sp. nov., an Antiviral Glycoprotein Producing Actinomycete Isolated from Forest Soil Around Kanas Lake of China.	Han L, Zhang G, Miao G, Zhang X, Feng J	Curr Microbiol	10.1007/s00284-015-0900-0	2015

References

#9274	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 40217
#18559	Wink, J.: Compendium of Actinobacteria. HZI-Helmholtz-Centre for Infection Research, Braunschweig .
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#20218	Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#68368	Automatically annotated from API 20E .
#124043	Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy .
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Streptomyces lavendofoliae (DSM 40217, ATCC 15872, ATCC 23928)

Name and taxonomic classification

Morphology

Cell morphology

Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Oxygen tolerance

Spore formation

Compound production

Halophily

Metabolite utilization

Metabolite production

Metabolite tests

Enzymes

API 20E

Isolation, sampling and environmental information

Isolation source categories

Isolation

Interaction and safety

Risk assessment

Sequence information

Genome sequences

Genome browser: GCA_014649735

16S sequences

Genome-based predictions

Predictions

Literature

Literature

References

BacDive

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