Name: Streptomyces katrae Jammu Tawi
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 15339

Type strain:

Species: Streptomyces katrae

Strain Designation: Jammu Tawi, RRL 5036

Culture col. no.: DSM 40550, ATCC 27440, CBS 748.72, IFO 13447, ISP 5550, NBRC 13447, NRRL B-3093, RIA 1408, JCM 4777, BCRC 15199, CGMCC 4.1914, IMET 43361, NCIMB 12981, NRRL ISP-5550, RIA 794, VKM Ac-1220

Strain history: KCC S-0777 <-- IFO 13447 <-- SAJ <-- ISP 5550 <-- K. C. Gupta RRL 5036.

NCBI tax ID(s): 68223 (species)

SI-ID 389341

ATCC 27440, IFO 13447, DSM 40550, NRRL B-3093, JCM 4777, IMET 43361, VKM Ac-1220, NCIMB 12981, CBS 748.72, NBRC 13447, BCRC 15199, CCRC 15199, CGMCC 4.1914

Other strains from Streptomyces katrae

S. katrae ST028243(HKI), A85/21.4, FSU-3754, ...
S. katrae SF003754(FSU),

Section

Streptomyces katrae Jammu Tawi is a mesophilic bacterium that was isolated from soil.

mesophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Actinomycetota*
	Class	*Actinomycetes*
	Order	*Kitasatosporales*
	Family	*Streptomycetaceae*
	Genus	*Streptomyces*
	Species	**Streptomyces katrae**
	Full Scientific Name (LPSN)	Streptomyces katrae Gupta and Chopra 1963 (Approved Lists 1980)

Information on morphological and physiological properties Morphology

Multimedia content

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Caption:

Medium 65 28°C

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Intellectual property rights:

Information on culture and growth conditions Culture and growth conditions

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Culture medium

GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)

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Culture medium growth

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Culture medium link

Medium recipe at MediaDive

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Culture medium composition

expand / minimize

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Culture medium

ROLLED OATS MINERAL MEDIUM (DSMZ Medium 84)

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Culture medium growth

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Culture medium link

Medium recipe provided by DSMZ

	Temperatures	Kind of temperature		Temperature
[Ref.: #9633]			growth	28 °C
[Ref.: #67770]			growth	28 °C

[Ref.: #9633]	Temperature range	mesophilic
[Ref.: #67770]	Temperature range	mesophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #20216]	Name of produced compound	Antibiotic agent
[Ref.: #20216]	Name of produced compound	Antifungal agent

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #9633]	Sample type/isolated from	soil
[Ref.: #9633]	Country	India
[Ref.: #9633]	Country ISO 3 Code	IND
[Ref.: #9633]	Continent	Asia
* marker position based on {}

Isolation sources categories

#Environmental

#Terrestrial

#Soil

What are isolation sources categories?

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

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Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #20218]	Streptomyces katrae gene for 16S ribosomal RNA, partial sequence, strain: JCM 4777	D44354	120	ENA	68223 tax ID	*
[Ref.: #20218]	Streptomyces katrae gene for 16S rRNA, partial sequence, strain: NBRC 13447	AB184409	1474	ENA	68223 tax ID	*
[Ref.: #20218]	Streptomyces katrae strain NRRL B-3093 16S ribosomal RNA gene, partial sequence	EF654092	1459	ENA	68223 tax ID	*

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Streptomyces katrae NRRL ISP-5550	GCA_000966975	contig	GenBank	68223 tax ID

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Streptomyces katrae NRRL ISP-5550 NCBI: GCA_000966975.1
[Ref.: #69480]	motile	no	93.939	no
[Ref.: #69480]	flagellated	no	97.722	no
[Ref.: #69480]	gram-positive	yes	87.192	no
[Ref.: #69480]	anaerobic	no	99.143	no
[Ref.: #69480]	aerobic	yes	92.185	no
[Ref.: #69480]	halophile	no	94.452	no
[Ref.: #69480]	spore-forming	yes	93.676	no
[Ref.: #69480]	thermophile	no	99.125	no
[Ref.: #69480]	glucose-util	yes	90.589	no
[Ref.: #69480]	glucose-ferment	no	88.529	no

Availability in culture collections External links

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Culture collection no.

DSM 40550, ATCC 27440, CBS 748.72, IFO 13447, ISP 5550, NBRC 13447, NRRL B-3093, RIA 1408, JCM 4777, BCRC 15199, CGMCC 4.1914, IMET 43361, NCIMB 12981, NRRL ISP-5550, RIA 794, VKM Ac-1220

[Ref.: #84432]

SI-ID 389341

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Streptomyces yangpuensis sp. nov., isolated from soil.	Tang B, Yu Y, Zhi X, Yang L, Cen X, Zhao G, Ding X	Int J Syst Evol Microbiol	10.1099/ijsem.0.000861	2015	*
Metabolism	[The carbohydrate-containing cell wall polymers of some species from the cluster "Streptomyces lavendulae"].	Shashkov AS, Kozlova IuI, Streshinskaia GM, Kosmachevskaia LN, Bueva OV, Evtushenko LI, Naumova IB	Mikrobiologiia		2001	*

References

#9633

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 40550

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#20216

Leibniz-Institut für Naturstoff-Forschung und Infektionsbiologie e. V. Hans-Knöll-Institut (HKI) Curators of the HKI: Collection Description Leibniz-Institut für Naturstoff-Forschung und Infektionsbiologie e. V. Hans-Knöll-Institut (HKI) .

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#84432

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID389341.1 )

* These data were automatically processed and therefore are not curated

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Streptomyces katrae NRRL ISP-5550

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