Streptomyces griseoruber (DSM 40281, ATCC 23919, CBS 903.68)

Name: Streptomyces griseoruber (DSM 40281, ATCC 23919, CBS 903.68)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 15276

Type strain

Strain Designation H-4650

Culture col. no. DSM 40281 ATCC 23919 CBS 903.68 IFO 12873 ISP 5281 15 more

NCBI tax ID(s) 1943

Special Collections DSMZ CCUG JCM Wink compendium

History DSMZ <- E.B. Shirling, ISP <- T. Yamaguchi, H-4650 JCM <-- KCC S-0200 <-- H. Yonehara (IAM 0110) <-- IID H-4650.

Links

Streptomyces griseoruber H-4650 is a bacterium that was isolated from soil.

genome sequence 16S sequence Bacteria

Name and taxonomic classification

SI-ID 13341

LMG 19325,ATCC 23919,CCRC 11826,CCUG 11117,DSM 40281,IFO 12873,JCM 4200,JCM 4642,NRRL B-1818,VKM Ac-1900,CBS 903.68,AS 4.1417,NBRC 12873,BCRC 11826,HAMBI 1051,CGMCC 4.1417

@ref 20215

Last LPSN update 2026-05-29 08:28:29

Domain Bacteria

Phylum Actinomycetota

Class Actinomycetes

Order Kitasatosporales

Family Streptomycetaceae

Genus Streptomyces

Species Streptomyces griseoruber

Full scientific name Streptomyces griseoruber Yamaguchi and Saburi 1955 (Approved Lists 1980)

BacDive ID	Other strains from **Streptomyces griseoruber** (3)	Type strain
15277	S. griseoruber DSM 40769, LBG A 3079, ETH 24200
15278	S. griseoruber DSM 41175, IMRU 3843
176623	S. griseoruber K412, DSM 42067, KCTC 59406

Morphology

Cell morphology

@ref	Gram stain	Confidence
125439	positive	95.387
125439		92.863
125438	positive	90.295

Culture and growth conditions

Culture medium

@ref	Name	Growth	Medium link	Composition
9432	GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)		Medium recipe at MediaDive	Name: GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) Composition: Agar 18.0 g/l Malt extract 10.0 g/l Yeast extract 4.0 g/l Glucose 4.0 g/l CaCO3 2.0 g/l Distilled water
9432	ROLLED OATS MINERAL MEDIUM (DSMZ Medium 84)		Medium recipe at MediaDive	Name: ROLLED OATS MINERAL MEDIUM (DSMZ Medium 84) Composition: Agar 20.0 g/l Rolled oats 20.0 g/l ZnSO4 x 7 H2O 0.001 g/l MnCl2 x 4 H2O 0.001 g/l FeSO4 x 7 H2O 0.001 g/l Distilled water

Culture temp

@ref	Growth	Type	Temperature (°C)
9432	positive	growth	28
18578	positive	optimum	28
67770	positive	growth	28

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
125439	obligate aerobe	96.808

Spore formation

@ref	Spore formation	Confidence
125439		92.924
125438		90.448

Compound production

9432

Compoundantitrichomonas factor

Halophily

@ref	Salt	Growth	Tested relation	Concentration
18578	NaCl	positive	maximum	5 %

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
18578	22599 ChEBI	arabinose	+
68368	29016 ChEBI	arginine	-	hydrolysis	from API 20E
18578	62968 ChEBI	cellulose	-
68368	16947 ChEBI	citrate	+	assimilation	from API 20E
18578	28757 ChEBI	fructose	+/-
68368	5291 ChEBI	gelatin	+	hydrolysis	from API 20E
18578	17234 ChEBI	glucose	+
68368	25094 ChEBI	lysine	-	degradation	from API 20E
18578	29864 ChEBI	mannitol	-
18578	17268 ChEBI	myo-inositol	-
68368	18257 ChEBI	ornithine	-	degradation	from API 20E
18578	16634 ChEBI	raffinose	-
18578	26546 ChEBI	rhamnose	+/-
18578	17992 ChEBI	sucrose	-
68368	27897 ChEBI	tryptophan	+	energy source	from API 20E
68368	16199 ChEBI	urea	-	hydrolysis	from API 20E
18578	18222 ChEBI	xylose	-

Metabolite production

@ref	Chebi-ID	Metabolite
68368	15688 ChEBI	acetoin	from API 20E
68368	16136 ChEBI	hydrogen sulfide	from API 20E
68368	35581 ChEBI	indole	from API 20E

Metabolite tests

@ref	Chebi-ID	Metabolite	Voges-proskauer-test	Indole test
68368	15688 ChEBI	acetoin	+		from API 20E
68368	35581 ChEBI	indole		+	from API 20E

Enzymes

@ref	Value	Activity	Ec
68368	arginine dihydrolase	-	3.5.3.6	from API 20E
68368	beta-galactosidase	+	3.2.1.23	from API 20E
68368	gelatinase	+		from API 20E
68368	lysine decarboxylase	-	4.1.1.18	from API 20E
68368	ornithine decarboxylase	-	4.1.1.17	from API 20E
68368	tryptophan deaminase	+	4.1.99.1	from API 20E
68368	urease	-	3.5.1.5	from API 20E

API 20E

@ref	ONPG	ADH (Arg)	LDC (Lys)	ODC	CIT	H2S productionH2S	URE	TDA (Trp)	IND	Acetoin production (Voges Proskauer test)VP	GEL	GLU	MAN	INO	Sor	RHA	SAC	MEL	AMY	ARA	OX	Nitrite productionNO2	Reduction to N2N2	MotilityMOB	Growth on MacConkey mediumMAC	OF-O	OF-F
18578	+	-	-	-	+	+	-	+	+	+	+	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Environmental	#Terrestrial	#Soil

Isolation

@ref	Sample type	Country	Country ISO 3 Code	Continent
9432	soil	Japan	JPN	Asia

Taxonmaps

69479

Global distribution of 16S sequence AY094585 (>99% sequence identity) for Streptomyces from Microbeatlas

Aquatic Samples	18
Soil Samples	433
Animal Samples	71
Plant Samples	350
Total Samples	872

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
18578	1	German classification According to TRBA 466
9432	1	Risk group (German classification) According to TRBA 466

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
67770	ASM151420v1 assembly for Streptomyces griseoruber DSM 40281	scaffold	GCA_001514205	1943.4	2802429330	1943	45.7
67770	ASM141858v1 assembly for Streptomyces griseoruber NRRL B-1818	scaffold	GCA_001418585			1943	0

16S sequences

@ref	Description	Accession	Length	NCBI tax ID
20218	Streptomyces griseoruber strain DSM 40281 16S ribosomal RNA gene, partial sequence	GU383130	779	1943
20218	Streptomyces griseoruber 16S ribosomal RNA gene, partial sequence	AY094585	1436	1943
20218	Streptomyces griseoruber gene for 16S rRNA, partial sequence	AB122763	564	1943
20218	Streptomyces griseoruber strain JCM 4642 16S ribosomal RNA gene, partial sequence	AY999750	1419	1943
20218	Streptomyces griseoruber gene for 16S ribosomal RNA, partial sequence, strain: JCM 4642	D44282	120	1943
20218	Streptomyces griseoruber gene for 16S rRNA, partial sequence, strain: NBRC 12873	AB184209	1473	1943
20218	Streptomyces griseoruber strain NRRL B-1818 16S ribosomal RNA gene, partial sequence	AY999723	1420	1943
124043	Streptomyces griseoruber strain NRRL B-1818(T) 16S ribosomal RNA gene, partial sequence.	MH192345	578	1943

GC content

@ref	GC-content (mol%)	Method
67770	71.7	genome sequence analysis

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: ASM151420v1 assembly for Streptomyces griseoruber DSM 40281
BV-BRC: 1943.4

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	oxygen_tolerance	BacteriaNetⓘ	obligate aerobe	96.81	no
125439	gram_stain	BacteriaNetⓘ	positive	95.39	no
125439	motility	BacteriaNetⓘ	no	92.86	no
125439	spore_formation	BacteriaNetⓘ	yes	92.92	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Streptomyces griseoruber strain DSM 40281
PATRIC: 1943.4

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	yes	90.30	no
125438	anaerobic	anaerobicⓘ	no	96.28	no
125438	spore-forming	spore-formingⓘ	yes	90.45	no
125438	aerobic	aerobicⓘ	yes	88.46	no
125438	thermophilic	thermophileⓘ	no	96.00	no
125438	flagellated	motile2+ⓘ	no	88.50	no

Literature

Topic	Title	Authors	Journal	DOI	Year
	Investigation of dirigent like domains from bacterial genomes.	Bardin M, Rousselot-Pailley P, Tron T, Robert V.	BMC Bioinformatics	10.1186/s12859-022-04832-6	2022
Metabolism	Resistance-Guided Mining of Bacterial Genotoxins Defines a Family of DNA Glycosylases.	Bradley NP, Wahl KL, Steenwyk JL, Rokas A, Eichman BF.	mBio	10.1128/mbio.03297-21	2022
	Harnessing Actinobacteria secondary metabolites for tuberculosis drug discovery: Historical trends, current status and future outlooks	de Almeida L, Fernandes S, de Oliveira G, da Silveira Silva M, de Souza T, Rodrigues-Junior V, Cibulski S.	Nat Prod Bioprospect		2025
Metabolism	Production of anti-cancer agent using microbial biotransformation.	Roh C, Kang C.	Molecules	10.3390/molecules191016684	2014
Metabolism	Extracellular Synthesis of Selenium Nanoparticles from an Actinomycetes Streptomyces griseoruber and Evaluation of its Cytotoxicity on HT-29 Cell Line.	Ranjitha VR, Ravishankar VR.	Pharm Nanotechnol	10.2174/2211738505666171113141010	2018
	Potent activity of bioconjugated peptide and selenium nanoparticles against colorectal adenocarcinoma cells.	Ranjitha VR, Muddegowda U, Ravishankar Rai V.	Drug Dev Ind Pharm	10.1080/03639045.2019.1634090	2019
	Actinomycetes mediated synthesis of gold nanoparticles from the culture supernatant of Streptomyces griseoruber with special reference to catalytic activity.	Ranjitha VR, Rai VR.	3 Biotech	10.1007/s13205-017-0930-3	2017
	Efficacy of Streptomyces melanosporofaciens strain X216 at controlling clubroot disease on oilseed rape.	Ding L, Zhou H, Liang HD, Tan L, Zhao H, Chen XJ, Ren ZH.	Front Microbiol	10.3389/fmicb.2023.1249813	2023
	Inhibition of Quorum Sensing and Virulence Factors of Pseudomonas aeruginosa by Biologically Synthesized Gold and Selenium Nanoparticles.	Elshaer SL, Shaaban MI.	Antibiotics (Basel)	10.3390/antibiotics10121461	2021
	Larvicidal potential, toxicological assessment, and molecular docking studies of four Egyptian bacterial strains against Culex pipiens L. (Diptera: Culicidae).	Mansour T, Radwan WH, Mansour M, Gomaa M, Farouk F, Shepl M, Soliman AG, Abd-Elhalim BT, El-Senosy MMK, Bakry A, Ebeed NM, Alsenosy NK, Elhariry H, Galal A, El-Sayed SM, Adly E, Abu-Hussien SH.	Sci Rep	10.1038/s41598-023-44279-0	2023
Metabolism	Gombapyrones, new alpha-pyrone metabolites produced by Streptomyces griseoruber Acta 3662.	Helaly S, Schneider K, Nachtigall J, Vikineswary S, Tan GY, Zinecker H, Imhoff JF, Sussmuth RD, Fiedler HP.	J Antibiot (Tokyo)	10.1038/ja.2009.70	2009
	Mechanistic Aspects of Microbe-Mediated Nanoparticle Synthesis.	Ghosh S, Ahmad R, Banerjee K, AlAjmi MF, Rahman S.	Front Microbiol	10.3389/fmicb.2021.638068	2021
Enzymology	Biogenic selenium nanoparticles and selenium/chitosan-Nanoconjugate biosynthesized by Streptomyces parvulus MAR4 with antimicrobial and anticancer potential.	Hassan MG, Hawwa MT, Baraka DM, El-Shora HM, Hamed AA.	BMC Microbiol	10.1186/s12866-023-03171-7	2024
	Biocontrol of strawberry gray mold caused by Botrytis cinerea with the termite associated Streptomyces sp. sdu1201 and actinomycin D.	Yong D, Li Y, Gong K, Yu Y, Zhao S, Duan Q, Ren C, Li A, Fu J, Ni J, Zhang Y, Li R.	Front Microbiol	10.3389/fmicb.2022.1051730	2022
	Process optimization for gold nanoparticles biosynthesis by Streptomyces albogriseolus using artificial neural network, characterization and antitumor activities.	El-Naggar NE, El-Sawah AA, Elmansy MF, Elmessiry OT, El-Saidy ME, El-Sherbeny MK, Sarhan MT, Elhefnawy AA, Dalal SR.	Sci Rep	10.1038/s41598-024-54698-2	2024
	Myco-Synthesized Molluscicidal and Larvicidal Selenium Nanoparticles: A New Strategy to Control Biomphalaria alexandrina Snails and Larvae of Schistosoma mansoni with an In Silico Study on Induced Oxidative Stress.	Morad MY, El-Sayed H, Elhenawy AA, Korany SM, Aloufi AS, Ibrahim AM.	J Fungi (Basel)	10.3390/jof8030262	2022
	Bioprospecting of Actinobacterial Diversity and Antibacterial Secondary Metabolites from the Sediments of Four Saline Lakes on the Northern Tibetan Plateau.	Liu SW, Zhai XX, Liu D, Liu YY, Sui LY, Luo KK, Yang Q, Li FN, Nikandrova AA, Imamutdinova AN, Lukianov DA, Osterman IA, Sergiev PV, Zhang BY, Zhang DJ, Xue CM, Sun CH.	Microorganisms	10.3390/microorganisms11102475	2023
Enzymology	Molecular Basis for Polyketide Ketoreductase-Substrate Interactions.	Zhao S, Ni F, Qiu T, Wolff JT, Tsai SC, Luo R.	Int J Mol Sci	10.3390/ijms21207562	2020
	In Vitro and In Silico Approaches for the Antileishmanial Activity Evaluations of Actinomycins Isolated from Novel Streptomyces smyrnaeus Strain UKAQ_23.	Qureshi KA, Al Nasr I, Koko WS, Khan TA, Fatmi MQ, Imtiaz M, Khan RA, Mohammed HA, Jaremko M, Emwas AH, Azam F, Bholay AD, Elhassan GO, Prajapati DK.	Antibiotics (Basel)	10.3390/antibiotics10080887	2021
Pathogenicity	Engineered Streptomyces lividans Strains for Optimal Identification and Expression of Cryptic Biosynthetic Gene Clusters.	Peng Q, Gao G, Lu J, Long Q, Chen X, Zhang F, Xu M, Liu K, Wang Y, Deng Z, Li Z, Tao M.	Front Microbiol	10.3389/fmicb.2018.03042	2018
Metabolism	Isolation, characterization, anti-MRSA evaluation, and in-silico multi-target anti-microbial validations of actinomycin X₂ and actinomycin D produced by novel Streptomyces smyrnaeus UKAQ_23.	Qureshi KA, Bholay AD, Rai PK, Mohammed HA, Khan RA, Azam F, Jaremko M, Emwas AH, Stefanowicz P, Waliczek M, Kijewska M, Ragab EA, Rehan M, Elhassan GO, Anwar MJ, Prajapati DK.	Sci Rep	10.1038/s41598-021-93285-7	2021
Metabolism	Isolation, Purification, and Characterization of Heparinase from Streptomyces variabilis MTCC 12266.	Singh V, Haque S, Kumari V, El-Enshasy HA, Mishra BN, Somvanshi P, Tripathi CKM.	Sci Rep	10.1038/s41598-019-42740-7	2019
Metabolism	The hedamycin locus implicates a novel aromatic PKS priming mechanism.	Bililign T, Hyun CG, Williams JS, Czisny AM, Thorson JS.	Chem Biol	10.1016/j.chembiol.2004.04.016	2004
	Coronafacoyl Phytotoxin Biosynthesis and Evolution in the Common Scab Pathogen Streptomyces scabiei.	Bown L, Li Y, Berrue F, Verhoeven JTP, Dufour SC, Bignell DRD.	Appl Environ Microbiol	10.1128/aem.01169-17	2017
Enzymology	[Chitinase production by a strain of Streptomyces griseoruber isolated from the rhizosphere of sugar cane].	Carrillo L, Gomez Molina SE.	Rev Argent Microbiol		1998
	NEMiD: a web-based curated microbial diversity database with geo-based plotting.	Bhattacharjee K, Joshi SR.	PLoS One	10.1371/journal.pone.0094088	2014
	Advancements in Plant and Microbe-Based Synthesis of Metallic Nanoparticles and Their Antimicrobial Activity against Plant Pathogens.	Ali MA, Ahmed T, Wu W, Hossain A, Hafeez R, Islam Masum MM, Wang Y, An Q, Sun G, Li B.	Nanomaterials (Basel)	10.3390/nano10061146	2020
	Biofabrication of nanoparticles: sources, synthesis, and biomedical applications.	Kulkarni D, Sherkar R, Shirsathe C, Sonwane R, Varpe N, Shelke S, More MP, Pardeshi SR, Dhaneshwar G, Junnuthula V, Dyawanapelly S.	Front Bioeng Biotechnol	10.3389/fbioe.2023.1159193	2023
Metabolism	[Establishing the structure of anthracyclinones produced by Streptomyces griseoruber].	Bakina EV, Iartseva IV, Povarov LS, Aleksandrova LG, Tulemisova KA, Mamonova LP, Preobrazhenskaia MN.	Bioorg Khim		1989
Metabolism	[Comparison of antibiotic complexes formed by cultures of Streptomyces griseoruber].	Igina EF, Tulemisova KA, Golubchikov VS, Nikitina ET.	Antibiot Khimioter		1989
	Endosphere microbiome comparison between symptomatic and asymptomatic roots of Brassica napus infected with Plasmodiophora brassicae.	Zhao Y, Gao Z, Tian B, Bi K, Chen T, Liu H, Xie J, Cheng J, Fu Y, Jiang D.	PLoS One	10.1371/journal.pone.0185907	2017
Metabolism	Glycosylation of acyl carrier protein-bound polyketides during pactamycin biosynthesis.	Eida AA, Abugrain ME, Brumsted CJ, Mahmud T.	Nat Chem Biol	10.1038/s41589-019-0314-6	2019
Genetics	Harnessing the Microbiomes of Suppressive Composts for Plant Protection: From Metagenomes to Beneficial Microorganisms and Reliable Diagnostics.	Lutz S, Thuerig B, Oberhaensli T, Mayerhofer J, Fuchs JG, Widmer F, Freimoser FM, Ahrens CH.	Front Microbiol	10.3389/fmicb.2020.01810	2020
	A review on the biosynthesis of metal and metal salt nanoparticles by microbes.	Gahlawat G, Choudhury AR.	RSC Adv	10.1039/c8ra10483b	2019
Metabolism	Production of rhodomycins in Streptomyces griseoruber 4620.	Podojil M, Blumauerova M, Prikrylova V, Vanek Z, Gauze GF, Maksimova TS.	Folia Microbiol (Praha)	10.1007/bf02897211	1980
	Microbe-Mediated Biosynthesis of Nanoparticles: Applications and Future Prospects.	Koul B, Poonia AK, Yadav D, Jin JO.	Biomolecules	10.3390/biom11060886	2021
	Microbiologically-Synthesized Nanoparticles and Their Role in Silencing the Biofilm Signaling Cascade.	Lahiri D, Nag M, Sheikh HI, Sarkar T, Edinur HA, Pati S, Ray RR.	Front Microbiol	10.3389/fmicb.2021.636588	2021
	Saliniquinones A-F, New Members of the Highly Cytotoxic Anthraquinone-gamma-Pyrones from the Marine Actinomycete Salinispora arenicola.	Murphy BT, Narender T, Kauffman CA, Woolery M, Jensen PR, Fenical W.	Aust J Chem	10.1071/ch10068	2010
Enzymology	Elastases from human and canine granulocytes, II. Interaction with protease inhibitors of animal, plant, and microbial origin.	Schiessler H, Ohlsson K, Olsson I, Arnhold M, Birk Y, Fritz H.	Hoppe Seylers Z Physiol Chem	10.1515/bchm2.1977.358.1.53	1977
Metabolism	In vivo and in vitro analysis of the hedamycin polyketide synthase.	Das A, Khosla C.	Chem Biol	10.1016/j.chembiol.2009.11.005	2009
Genetics	Genome-Based Taxonomic Classification of the Phylum Actinobacteria.	Nouioui I, Carro L, Garcia-Lopez M, Meier-Kolthoff JP, Woyke T, Kyrpides NC, Pukall R, Klenk HP, Goodfellow M, Goker M.	Front Microbiol	10.3389/fmicb.2018.02007	2018
Metabolism	Studies on the production of actinomycin-D by Streptomyces griseoruber--a novel source.	Praveen V, Tripathi CK	Lett Appl Microbiol	10.1111/j.1472-765X.2009.02689.x	2009
	Streptomyces silvisoli sp. nov., a polyene producer, and Streptomyces tropicalis sp. nov., two novel actinobacterial species from peat swamp forests in Thailand.	Klaysubun C, Butdee W, Suriyachadkun C, Igarashi Y, Duangmal K.	Int J Syst Evol Microbiol	10.1099/ijsem.0.006063	2023
Phylogeny	Streptomyces aquilus sp. nov., a novel actinomycete isolated from a Chinese medicinal plant.	Li K, Guo Y, Wang J, Wang Z, Zhao J, Gao J.	Int J Syst Evol Microbiol	10.1099/ijsem.0.003995	2020
Phylogeny	Streptomyces coacervatus sp. nov., isolated from the intestinal tract of Armadillidium vulgare.	Shibazaki A, Omoto Y, Kudo T, Yaguchi T, Saito A, Ando A, Mikami Y, Gonoi T	Int J Syst Evol Microbiol	10.1099/ijs.0.019091-0	2010

References

#9432	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 40281
#18578	Wink, J.: Compendium of Actinobacteria. HZI-Helmholtz-Centre for Infection Research, Braunschweig .
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#20218	Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#68368	Automatically annotated from API 20E .
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#124043	Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy .
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Streptomyces griseoruber (DSM 40281, ATCC 23919, CBS 903.68)

Name and taxonomic classification

Morphology

Cell morphology

Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Oxygen tolerance

Spore formation

Compound production

Halophily

Metabolite utilization

Metabolite production

Metabolite tests

Enzymes

API 20E

Isolation, sampling and environmental information

Isolation source categories

Isolation

Taxonmaps

Interaction and safety

Risk assessment

Sequence information

Genome sequences

Genome browser: GCA_001514205

16S sequences

GC content

Genome-based predictions

Predictions

Literature

Literature

References

BacDive

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