Streptomyces griseocarneus (DSM 41678, ATCC 29818, DSM 41500)

Name: Streptomyces griseocarneus (DSM 41678, ATCC 29818, DSM 41500)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 15260

Type strain

Strain Designation IMC S-0603

Culture col. no. DSM 41678 ATCC 29818 DSM 41500 IFO 13861 IMC S-0603 6 more

NCBI tax ID(s) 173770

Special Collections DSMZ JCM

History DSMZ <- JCM ("Streptomyces alboverticillatus") <- KCC <- IFO <- Y. Okami, strain 1101-A5 JCM <-- KCC S-1010 <-- IFO 13861 <-- Y. Okami 1101-A5.

Links

Streptomyces griseocarneus IMC S-0603 is a bacterium that was isolated from soil.

genome sequence 16S sequence Bacteria

Name and taxonomic classification

SI-ID 39741

ATCC 29818,JCM 5010,DSM 41500,DSM 41678,IFO 13861,NBRC 13861,NRRL B-24281,CGMCC 4.1638,AS 4.1638

@ref 20215

Last LPSN update 2026-05-29 08:28:29

Domain Bacteria

Phylum Actinomycetota

Class Actinomycetes

Order Kitasatosporales

Family Streptomycetaceae

Genus Streptomyces

Species Streptomyces griseocarneus

Full scientific name Streptomyces griseocarneus (Benedict et al. 1950) Witt and Stackebrandt 1991

Synonyms (6)

"Streptomyces griseocarneus"
Streptomyces alboverticillatus
Streptoverticillium alboverticillatum
Streptomyces septatus
Streptoverticillium griseocarneum
Streptoverticillium septatum

BacDive ID	Other strains from **Streptomyces griseocarneus** (3)	Type strain
15257	S. griseocarneus NA232-M1, DSM 40004, AS 4.1368, ATCC 12628, ... (type strain)
15258	S. griseocarneus DSM 40520, ATCC 17963, CBS 729.72, IFO 13428, ...
15259	S. griseocarneus M-741, DSM 40577, ATCC 27464, CBS 772.72, ...

Morphology

Cell morphology

@ref	Confidence	Gram stain
125439	96.682
125439	99.927	positive
125438	90
125438	90.531	positive

Culture and growth conditions

Culture medium

@ref	Name	Growth	Medium link	Composition
65931	ROLLED OATS MINERAL MEDIUM (DSMZ Medium 84)		Medium recipe at MediaDive	Name: ROLLED OATS MINERAL MEDIUM (DSMZ Medium 84) Composition: Agar 20.0 g/l Rolled oats 20.0 g/l ZnSO4 x 7 H2O 0.001 g/l MnCl2 x 4 H2O 0.001 g/l FeSO4 x 7 H2O 0.001 g/l Distilled water
65931	GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)		Medium recipe at MediaDive	Name: GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) Composition: Agar 18.0 g/l Malt extract 10.0 g/l Yeast extract 4.0 g/l Glucose 4.0 g/l CaCO3 2.0 g/l Distilled water

Culture temp

@ref	Growth	Type	Temperature (°C)
65931	positive	growth	28
67770	positive	growth	28

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
125439	obligate aerobe	99.948

Spore formation

@ref	Spore formation	Confidence
125438		90.794
125439		99.429

Metabolite production

@ref	Metabolite	Production
67770	alboverticillin

Isolation, sampling and environmental information

Isolation

65931

Sample typesoil

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
65931	1	Risk group (German classification)

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
124043	ASM1735698v1 assembly for Streptomyces griseocarneus KCC S-1010	chromosome	GCA_017356985	51201.9		51201	85.67
67770	ASM215084v1 assembly for Streptomyces alboverticillatus NRRL B-24281	scaffold	GCA_002150845	173770.3	2791355432	173770	0

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
20218	Streptomyces alboverticillatus strain JCM 5010 16S ribosomal RNA gene, partial sequence	AY999766	1407		173770
67770	Streptomyces griseocarneus gene for 16S rRNA, partial sequence, strain: NBRC 13861	AB249978	1456		51201

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: ASM1735698v1 assembly for Streptomyces griseocarneus KCC S-1010
NCBI: GCA_017356985

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	oxygen_tolerance	BacteriaNetⓘ	obligate aerobe	99.95	no
125439	gram_stain	BacteriaNetⓘ	positive	99.93	no
125439	spore_formation	BacteriaNetⓘ	yes	99.43	no
125439	motility	BacteriaNetⓘ	no	96.68	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Streptomyces alboverticillatus NRRL B-24281
NCBI: GCA_002150845.1

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	yes	90.53	no
125438	anaerobic	anaerobicⓘ	no	97.89	no
125438	aerobic	aerobicⓘ	yes	89.82	no
125438	spore-forming	spore-formingⓘ	yes	90.79	no
125438	thermophilic	thermophileⓘ	no	96.00	yes
125438	flagellated	motile2+ⓘ	no	90.00	no

Literature

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#20218	Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )
#65931	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 41500
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#124043	Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy .
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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