Name: Lysinibacillus sphaericus 9602
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 1526

Type strain:

Species: Lysinibacillus sphaericus

Strain Designation: 9602

Culture col. no.: DSM 396, NCTC 9602, CRBIP 3.5052

Strain history: CIP <- 2009, J.F. Charles, Inst. Pasteur, Paris, France <- 2001, B. Papierok, Inst. Pasteur, Paris, France <- 1998, M.M. Lecadet, Inst. Pasteur, Paris, France <- 1992, H. de Barjac, Inst. Pasteur, Paris, France <- 1978, A.A. Yousten: strain NCTC 9602

NCBI tax ID(s): 1421 (species)

SI-ID 47162

DSM 396, NCTC 9602, CCT 2488

Other strains from Lysinibacillus sphaericus

Section

Lysinibacillus sphaericus 9602 is a mesophilic human pathogen that was isolated from air.

human pathogen
mesophilic
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacillota*
	Class	*Bacilli*
	Order	*Caryophanales*
	Family	*Caryophanaceae*
	Genus	*Lysinibacillus*
	Species	**Lysinibacillus sphaericus**
	Full Scientific Name (LPSN)	Lysinibacillus sphaericus (Meyer and Neide 1904) Ahmed et al. 2007

	Synonym	Lysinibacillus varians
	Synonym	Bacillus sphaericus
	Synonym	Lysinibacillus mangiferahumi
	Synonym	Lysinibacillus mangiferihumi
	Synonym	Lysinibacillus tabacifolii

Information on culture and growth conditions Culture and growth conditions

[Ref.: #178]

Culture medium

NUTRIENT AGAR (DSMZ Medium 1)

[Ref.: #178]

Culture medium growth

[Ref.: #178]

Culture medium link

Medium recipe at MediaDive

[Ref.: #178]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #178]			growth	30 °C

[Ref.: #178]

Temperature range

mesophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #178]	Name of produced compound	disulfide reductase
[Ref.: #178]	Name of produced compound	L leucine dehydrogenase
[Ref.: #178]	Name of produced compound	Leucine dehydrogenase

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #123121]	glucose ChEBI	-	fermentation
[Ref.: #123121]	inuline ChEBI	-	fermentation
[Ref.: #123121]	lactose ChEBI	-	fermentation
[Ref.: #123121]	nitrate ChEBI	-	reduction
[Ref.: #123121]	xylose ChEBI	-	fermentation

	Physiological tests	Metabolite	Methylred-test
[Ref.: #123121]		glucose ChEBI	-

	Enzymes	Enzyme	Enzyme activity	EC number
[Ref.: #123121]		lecithinase	-
[Ref.: #123121]		urease	-	3.5.1.5

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #178]	Sample type/isolated from	air

[Ref.: #123121]	Country	United States of America
[Ref.: #123121]	Country ISO 3 Code	USA
[Ref.: #123121]	Continent	North America
[Ref.: #123121]	Isolation date	1978
* marker position based on {}

Isolation sources categories

#Environmental

#Air

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence AJ311894 (>99% sequence identity) for Lysinibacillus from Microbeatlas

Aquatic Samples	49
Soil Samples	72
Animal Samples	210
Plant Samples	6
Total Samples	337

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #178]	Pathogenicity (human)	yes, in single cases
[Ref.: #178]	Pathogenicity (animal)	yes
[Ref.: #178]	Biosafety level	1	Risk group (German classification) According to TRBA 466
[Ref.: #123121]	Biosafety level	1	Risk group (French classification)

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #20218]	Bacillus sphaericus partial 16S rRNA gene, strain DSM 396, NTCC 9602	AJ311894	1563	ENA	1421 tax ID	*

[Ref.: #178]

GC-content

36.0 mol%

Availability in culture collections External links

[Ref.: #178]

Culture collection no.

DSM 396, NCTC 9602, CRBIP 3.5052

[Ref.: #71172]

SI-ID 47162

Literature:

Only first 10 entries are displayed. Click here to see all.

Topic	Title	Authors	Journal	DOI	Year
Enzymology	Cloning of the surface layer gene sllB from Bacillus sphaericus ATCC 14577 and its heterologous expression and purification.	Cui YB, Zhou Y, Liu WN, Chen QW, Ma GF, Shi WH, Wang YG, Yang L	Int J Mol Med	10.3892/ijmm.2012.890	2012	*
Metabolism	Charge transport in proteins probed by resonant photoemission.	Vyalikh DV, Maslyuk VV, Bluher A, Kade A, Kummer K, Dedkov YS, Bredow T, Mertig I, Mertig M, Molodtsov SL	Phys Rev Lett	10.1103/PhysRevLett.102.098101	2009	*
Enzymology	Secondary structure and Pd(II) coordination in S-layer proteins from Bacillus sphaericus studied by infrared and X-ray absorption spectroscopy.	Fahmy K, Merroun M, Pollmann K, Raff J, Savchuk O, Hennig C, Selenska-Pobell S	Biophys J	10.1529/biophysj.105.079137	2006	*
Metabolism	Novel surface layer protein genes in Bacillus sphaericus associated with unusual insertion elements.	Pollmann K, Raff J, Schnorpfeil M, Radeva G, Selenska-Pobell S	Microbiology (Reading)	10.1099/mic.0.28201-0	2005	*
Enzymology	Characterization of the sporulation-related gamma-D-glutamyl-(L)meso-diaminopimelic-acid-hydrolysing peptidase I of Bacillus sphaericus NCTC 9602 as a member of the metallo(zinc) carboxypeptidase A family. Modular design of the protein.	Hourdou ML, Guinand M, Vacheron MJ, Michel G, Denoroy L, Duez C, Englebert S, Joris B, Weber G, Ghuysen JM	Biochem J	10.1042/bj2920563	1993	*
Enzymology	Purification and partial characterization of the extracellular gamma-D-glutamyl-(L)meso-diaminopimelate endopeptidase I, from Bacillus sphaericus NCTC 9602.	Garnier M, Vacheron MJ, Guinand M, Michel G	Eur J Biochem	10.1111/j.1432-1033.1985.tb08873.x	1985	*
	X-ray absorption microscopy of bacterial surface protein layers: X-ray damage.	Kade A, Vyalikh DV, Danzenbacher S, Kummer K, Bluher A, Mertig M, Lanzara A, Scholl A, Doran A, Molodtsov SL	J Phys Chem B	10.1021/jp073650z	2007	*
	Photoemission and near-edge X-ray absorption fine structure studies of the bacterial surface protein layer of Bacillus sphaericus NCTC 9602.	Vyalikh DV, Kirchner A, Danzenbacher S, Dedkov YS, Kade A, Mertig M, Molodtsov SL	J Phys Chem B	10.1021/jp050748+	2005	*
	Electron holography of non-stained bacterial surface layer proteins.	Simon P, Lichte H, Wahl R, Mertig M, Pompe W	Biochim Biophys Acta	10.1016/j.bbamem.2004.03.005	2004	*

References

#178	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 396

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#71172

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID47162.1 )

#123121 Collection of Institut Pasteur ; Curators of the CIP; CRBIP3.5052
* These data were automatically processed and therefore are not curated

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