Name: Streptomyces globisporus DSM 40136
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 15234

Type strain:

Species: Streptomyces globisporus

Culture col. no.: DSM 40136, ATCC 15823, CBS 256.66, CBS 462.68, IFO 12739, INA 273/53, ISP 5136, JCM 4343, KCC S-0343, NBRC 12739, RIA 1004, ATCC 19723, ATCC 23613, BCRC 13757, CCM 3005, CGMCC 4.1631, KCTC 19068, NCIMB 13010, NRRL B-2566, VKM Ac-572

Strain history: KCC S-0343 <-- IFO 12739 <-- SAJ <-- ISP 5136 <-- INA 273/53.

NCBI tax ID(s): 66867 (species)

SI-ID 37107

ATCC 15823, ATCC 19723, IFO 12739, ATCC 12951, DSM 40136, JCM 4343, DSM 40796, NRRL B-2566, ATCC 23613, CCRC 13757, VKM Ac-572, NCIMB 13010, CBS 256.66, AS 4.1631, NBRC 12739, BCRC 13757, KCTC 19068, CGMCC 4.1631

Other strains from Streptomyces globisporus

S. globisporus ST004621(HKI),
S. globisporus ST004623(HKI),
S. globisporus ST004927(HKI),
S. globisporus
S. globisporus STI10606(IMET), #1000,
S. globisporus STI10607(IMET), #1000B,
S. globisporus STI10610(IMET), NCTC 2006
S. globisporus STI10611(IMET), #788,
S. globisporus STI10652(IMET), SN 201
S. globisporus STI10654(IMET), SN 259
S. globisporus STI10653(IMET), SN 252
S. globisporus JCM 4317, CCM 244, IFO 12208, NBRC ...

Section

Streptomyces globisporus DSM 40136 is a mesophilic bacterium that was isolated from soil.

mesophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Actinomycetota*
	Class	*Actinomycetes*
	Order	*Kitasatosporales*
	Family	*Streptomycetaceae*
	Genus	*Streptomyces*
	Species	**Streptomyces globisporus**
	Full Scientific Name (LPSN)	Streptomyces globisporus (Krassilnikov 1941) Waksman 1953 (Approved Lists 1980)

	Synonym	Streptomyces mediolani
	Synonym	Streptomyces griseinus
	Synonym	"Actinomyces* albovinaceus"*
	Synonym	"Actinomyces* globisporus"*
	Synonym	Streptomyces albovinaceus

Information on morphological and physiological properties Morphology

Multimedia content

[Ref.: #9338]

Caption:

Medium 65 28°C

[Ref.: #9338]

Intellectual property rights:

Information on culture and growth conditions Culture and growth conditions

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Culture medium

GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)

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Culture medium growth

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Culture medium link

Medium recipe at MediaDive

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Culture medium composition

expand / minimize

		Temperature
[Ref.: #9338]	growth	28 °C
[Ref.: #18541]	optimum	28 °C
[Ref.: #67770]	growth	28 °C

[Ref.: #9338]	Temperature range	mesophilic
[Ref.: #18541]	Temperature range	mesophilic
[Ref.: #67770]	Temperature range	mesophilic

Information on physiology and metabolism Physiology and metabolism

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #18541]	arabinose ChEBI	+
[Ref.: #68368]	arginine ChEBI	+	hydrolysis	* from API 20E
[Ref.: #18541]	cellulose ChEBI	+
[Ref.: #68368]	citrate ChEBI	+	assimilation	* from API 20E
[Ref.: #18541]	fructose ChEBI	+
[Ref.: #68368]	gelatin ChEBI	+	hydrolysis	* from API 20E
[Ref.: #18541]	glucose ChEBI	+
[Ref.: #68368]	lysine ChEBI	+	degradation	* from API 20E
[Ref.: #18541]	mannitol ChEBI	+
[Ref.: #18541]	myo-inositol ChEBI	-
[Ref.: #68368]	ornithine ChEBI	+	degradation	* from API 20E
[Ref.: #18541]	raffinose ChEBI	-
[Ref.: #18541]	rhamnose ChEBI	+
[Ref.: #18541]	sucrose ChEBI	-
[Ref.: #68368]	tryptophan ChEBI	-	energy source	* from API 20E
[Ref.: #68368]	urea ChEBI	+	hydrolysis	* from API 20E
[Ref.: #18541]	xylose ChEBI	-
	Only first 10 entries are displayed. Click here to see all.

	Metabolite	Production
[Ref.: #68368]	acetoin ChEBI	no	* from API 20E
[Ref.: #68368]	hydrogen sulfide ChEBI	no	* from API 20E
[Ref.: #68368]	indole ChEBI	no	* from API 20E

	Physiological tests	Metabolite	Voges-Proskauer-test	Indole test
[Ref.: #68368]		acetoin ChEBI	-		* from API 20E
[Ref.: #68368]		indole ChEBI		-	* from API 20E

	Enzyme	Enzyme activity	EC number
[Ref.: #68382]	acid phosphatase	+	3.1.3.2	* from API zym
[Ref.: #68382]	alkaline phosphatase	+	3.1.3.1	* from API zym
[Ref.: #68382]	alpha-chymotrypsin	-	3.4.21.1	* from API zym
[Ref.: #68382]	alpha-fucosidase	+	3.2.1.51	* from API zym
[Ref.: #68382]	alpha-galactosidase	-	3.2.1.22	* from API zym
[Ref.: #68382]	alpha-glucosidase	+	3.2.1.20	* from API zym
[Ref.: #68382]	alpha-mannosidase	+	3.2.1.24	* from API zym
[Ref.: #68368]	arginine dihydrolase	+	3.5.3.6	* from API 20E
[Ref.: #68368]	beta-galactosidase	+	3.2.1.23	* from API 20E, API zym
[Ref.: #68382]	beta-glucosidase	+	3.2.1.21	* from API zym
[Ref.: #68382]	beta-glucuronidase	-	3.2.1.31	* from API zym
[Ref.: #68382]	cystine arylamidase	+	3.4.11.3	* from API zym
[Ref.: #68382]	esterase (C 4)	+		* from API zym
[Ref.: #68382]	esterase lipase (C 8)	+		* from API zym
[Ref.: #68368]	gelatinase	+		* from API 20E
[Ref.: #68382]	leucine arylamidase	+	3.4.11.1	* from API zym
[Ref.: #68382]	lipase (C 14)	+		* from API zym
[Ref.: #68368]	lysine decarboxylase	+	4.1.1.18	* from API 20E
[Ref.: #68382]	N-acetyl-beta-glucosaminidase	+	3.2.1.52	* from API zym
[Ref.: #68382]	naphthol-AS-BI-phosphohydrolase	+		* from API zym
[Ref.: #68368]	ornithine decarboxylase	+	4.1.1.17	* from API 20E
[Ref.: #68382]	trypsin	+	3.4.21.4	* from API zym
[Ref.: #68368]	tryptophan deaminase	-	4.1.99.1	* from API 20E
[Ref.: #68368]	urease	+	3.5.1.5	* from API 20E
[Ref.: #68382]	valine arylamidase	+		* from API zym
	Only first 10 entries are displayed. Click here to see all.

API® 20E:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	beta-GalactosidaseONPG	Arginine dihydrolaseADH (Arg)	Lysine decarboxylaseLDC (Lys)	Ornithine decarboxylaseODC	Citrate utilizationCIT	H2S productionH2S	Urease/urea hydrolysisURE	Tryptophan deaminaseTDA (Trp)	Indole productionIND	Acetoin production (Voges Proskauer test)VP	Gelatinase/gelatin hydrolysisGEL	Fermentation/oxidation of D-glucoseGLU	Fermentation/oxidation of D-mannitolMAN	Fermentation/oxidation of inositolINO	Fermentation/oxidation of sorbitolSor	Fermentation/oxidation of L-rhamnoseRHA	Fermentation/oxidation of sucroseSAC	Fermentation/oxidation of melibioseMEL	Fermentation/oxidation of amygdalinAMY	Fermentation/oxidation of L-arabinoseARA	Cytochrome oxidaseOX	Nitrite productionNO2	Reduction to N2N2	MotilityMOB	Growth on MacConkey mediumMAC	Oxidative catabolisation of D-glucoseOF-O	Fermentation of D-glucoseOF-F
[Ref.: #18541]	101	+	+	+	+	+	-	+	-	-	-	+	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.

API® zym:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Control	2-naphthyl phosphateAlkaline phosphatase	2-naphthyl butyrateEsterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	2-naphthyl myristateLipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	N-benzoyl-DL-arginine-2-naphthylamideTrypsin	N-glutaryl-phenylalanine-2-naphthylamidealpha- Chymotrypsin	2-naphthyl phosphateAcid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	6-Br-2-naphthyl-alphaD-galactpyranosidealpha- Galactosidase	2-naphthyl-betaD-galactpyranosidebeta- Galactosidase	Naphthol-AS-BI-betaD-glucuronidebeta- Glucuronidase	2-naphthyl-alphaD-glucopyranosidealpha- Glucosidase	6-Br-2-naphthyl-betaD-glucopyranosidebeta- Glucosidase	1-naphthyl-N-acetyl-betaD-glucosaminideN-acetyl-beta- glucosaminidase	6-Br-2-naphthyl-alphaD-mannopyranosidealpha- Mannosidase	2-naphthyl-alphaL-fucopyranosidealpha- Fucosidase
[Ref.: #18541]	219	not determinedn.d.	+	+	+	+	+	+	+	+	-	+	+	-	+	-	+	+	+	+	+

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #9338]	Sample type/isolated from	soil

[Ref.: #67770]	Sample type/isolated from	Soil
* marker position based on {}

Isolation sources categories

#Environmental

#Terrestrial

#Soil

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence AB249958 (>99% sequence identity) for Streptomyces from Microbeatlas

Aquatic Samples	286
Soil Samples	2441
Animal Samples	1009
Plant Samples	294
Total Samples	4030

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #18541]	Biosafety level	1	German classification
[Ref.: #9338]	Biosafety level	1	Risk group (German classification) According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #9338]	Streptomyces albovinaceus gene for 16S rRNA, partial sequence, strain: NBRC 12739	AB249958	1481	ENA	66867 tax ID
[Ref.: #9338]	Streptomyces albovinaceus strain JCM 4343 16S ribosomal RNA gene, partial sequence	AY999759	1441	ENA	66867 tax ID
[Ref.: #20218]	Streptomyces albovinaceus strain DSM 40136 16S ribosomal RNA gene, partial sequence	GU383174	779	ENA	66867 tax ID	*
[Ref.: #20218]	Streptomyces albovinaceus gene for 16S ribosomal RNA, partial sequence, strain: JCM 4343	D44063	120	ENA	66867 tax ID	*
[Ref.: #20218]	Streptomyces albovinaceus gene for 16S rRNA, partial sequence	AB122764	564	ENA	66867 tax ID	*

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Streptomyces albovinaceus NRRL B-2566	GCA_002154385	scaffold	GenBank	66867 tax ID

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Streptomyces albovinaceus NRRL B-2566 NCBI: GCA_002154385.1
[Ref.: #69480]	flagellated	no	97.936	no
[Ref.: #69480]	gram-positive	yes	90.453	no
[Ref.: #69480]	anaerobic	no	99.169	no
[Ref.: #69480]	halophile	no	93.815	no
[Ref.: #69480]	spore-forming	yes	91.429	no
[Ref.: #69480]	thermophile	no	98.725	yes
[Ref.: #69480]	glucose-util	yes	88.921	yes
[Ref.: #69480]	aerobic	yes	93.439	no
[Ref.: #69480]	motile	no	93.924	no
[Ref.: #69480]	glucose-ferment	no	88.07	no

Availability in culture collections External links

[Ref.: #9338]

Culture collection no.

DSM 40136, ATCC 15823, CBS 256.66, CBS 462.68, IFO 12739, INA 273/53, ISP 5136, JCM 4343, KCC S-0343, NBRC 12739, RIA 1004, ATCC 19723, ATCC 23613, BCRC 13757, CCM 3005, CGMCC 4.1631, KCTC 19068, NCIMB 13010, NRRL B-2566, VKM Ac-572

[Ref.: #84331]

SI-ID 37107

References

#9338

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 40136

#18541

Wink, J.: Compendium of Actinobacteria. HZI-Helmholtz-Centre for Infection Research, Braunschweig .

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#68368

Automatically annotated from API 20E .

#68382

Automatically annotated from API zym .

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#84331

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID37107.1 )

* These data were automatically processed and therefore are not curated

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Search for species Streptomyces globisporus subsp. globisporus in external resources:
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Streptomyces albovinaceus NRRL B-2566

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