Streptomyces fumanus DSM 40154 is a bacterium that builds an aerial mycelium and was isolated from alluvial soil of hot and humid area.
genome sequence 16S sequence Bacteria
SI-ID 79973
| @ref 20215 |
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Last LPSN update
2026-02-09 11:21:37 |
| Domain Bacteria |
| Phylum Actinomycetota |
| Class Actinomycetes |
| Order Kitasatosporales |
| Family Streptomycetaceae |
| Genus Streptomyces |
| Species Streptomyces fumanus |
| Full scientific name Streptomyces fumanus (Sveshnikova 1957) Pridham et al. 1958 (Approved Lists 1980) |
| Synonyms (1) |
| @ref | Name | Growth | Medium link | Composition | |
|---|---|---|---|---|---|
| 9353 | GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) | Medium recipe at MediaDive  | Name: GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) Composition: Agar 18.0 g/l Malt extract 10.0 g/l Yeast extract 4.0 g/l Glucose 4.0 g/l CaCO3 2.0 g/l Distilled water | ||
| 19412 | ISP 2 | Name: ISP 2 / Yeast Malt Agar (5265); 5265 Composition Malt extract 10.0 g/l Yeast extract 4.0 g/l Glucose 4.0 g/l Agar 15.0 g/l Preparation: Sterilisation: 20 minutes at 121°C pH before sterilisation: 7.0 Usage: Maintenance and Taxonomy Organisms: All Actinomycetes | |||
| 19412 | ISP 3 | Name: ISP 3; 5315 Composition Dog oat flakes 20.0 g/l Trace element solution (5314) 2.5 ml/l Agar 18.0 g/l Preparation: Oat flakes are cooked for 20 minutes, trace element solution and agar are added (in the case of non rolled oat flakes the suspension has to bee filtrated). Sterilisation: 20 minutes at 121°C pH before sterilisation: 7.8 Usage: Maintenance and taxonomy (e.g. SEM As liquid medium for metabolite production) Organisms: All Actinomycetes Trace element solution 5314 Name: Trace element solution 5314; 5314 Composition CaCl2 x H2O 3.0 g/l Fe-III-citrate 1.0 g/l MnSO4 0.2 g/l ZnCl2 0.1 g/l CuSO4 x 5 H2O 0.025 g/l Sodium tetra borate 0.2 g/l CoCl2 x 6 H2O 0.004 g/l Sodium molybdate 0.01 g/l Preparation: Use double destillated water. Sterilisation: 20 minutes at 121°C pH before sterilisation: Usage: Trace element solution for different media Organisms: | |||
| 19412 | ISP 4 | Name: ISP 4; DSM 547 Solution I: Difco soluble starch, 10.0 g. Make a paste of the starch with a small amount of cold distilled water and bring to a volume of 500 ml. Solution II: CaCO3 2.0 g K2HPO4 (anhydrous) 1.0 g MgSO4 x 7 H2O 1.0 g NaCl 1.0 g (NH4)2SO4 2.0 g Distilled water 500.0 ml Trace salt solution (see below) 1.0 ml The pH should be between 7.0 and 7.4. Do not adjust if it is within this range. Mix solutions I and II together. Add 20.0 g agar. Liquify agar by steaming at 100°C for 10 to 20 min. Trace element solution: FeSO4 x 7 H2O 0.1 g MnCl2 x 4 H2O 0.1 g ZnSO4 x 7 H2O 0.1 g Distilled water 100.0 ml | |||
| 19412 | ISP 5 | Name: ISP 5 (5323) Composition L-Asparagine 1.0 g/l Glycerol 10.0 g/l K2HPO4 1.0 g/l Salt solution (see preparation) 1.0 ml/l Agar 20.0 g/l Preparation: Salt solution 1.0 g FeSO4 x 7 H2O 1.0 g MnCl2 x 4 H2O 1.0 g ZNSO4 x 7 H2O in 100 ml water Sterilisation: 20 minutes at 121°C pH before sterilisation: 7.2 Usage: Maintenance and taxonomy Organisms: All Actinomycetes | |||
| 19412 | ISP 6 | Name: ISP 6 (5318) Composition Peptone 15.0 g/l Proteose peptose 5.0 g/l Ferric ammonium citrate 0.5 g/l Sodium glycerophosphate 1.0 g/l Sodium thiosulfate 0.08 g/l Yeast extract 1.0 g/l Agar 15.0 g/l Sterilisation: 20 minutes at 121°C pH before sterilisation: Usage: Production of melanoid pigments Organisms: All Actinomycetes | |||
| 19412 | ISP 7 | Name: ISP 7 (5322) Composition Glycerol 15.0 g/l L-Tyrosine 0.5 g/l L-Asparagine 1.0 g/l K2HPO4 0.5 g/l NaCl 0.5 g/l FeSO4 x 7 H2O 0.01 g/l Trace element solution 5343 1.0 ml/l Agar 20.0 Sterilisation: 20 minutes at 121°C pH before sterilisation: 7.3 Usage: Production of melanoid pigments Organisms: All Actinomycetes |
| @ref | Oxygen tolerance | Confidence | |
|---|---|---|---|
| 125439 | obligate aerobe | 99.2 |
| @ref | Chebi-ID | Metabolite | Utilization activity | Kind of utilization tested | |
|---|---|---|---|---|---|
| 68368 | 29016 ChEBI | arginine | - | hydrolysis | from API 20E |
| 68368 | 16947 ChEBI | citrate | + | assimilation | from API 20E |
| 68368 | 5291 ChEBI | gelatin | + | hydrolysis | from API 20E |
| 68368 | 25094 ChEBI | lysine | + | degradation | from API 20E |
| 68368 | 18257 ChEBI | ornithine | + | degradation | from API 20E |
| 68368 | 27897 ChEBI | tryptophan | - | energy source | from API 20E |
| 68368 | 16199 ChEBI | urea | + | hydrolysis | from API 20E |
| @ref | Value | Activity | Ec | |
|---|---|---|---|---|
| 68382 | acid phosphatase | + | 3.1.3.2 | from API zym |
| 68382 | alkaline phosphatase | + | 3.1.3.1 | from API zym |
| 68382 | alpha-chymotrypsin | - | 3.4.21.1 | from API zym |
| 68382 | alpha-fucosidase | - | 3.2.1.51 | from API zym |
| 68382 | alpha-galactosidase | + | 3.2.1.22 | from API zym |
| 68382 | alpha-glucosidase | + | 3.2.1.20 | from API zym |
| 68382 | alpha-mannosidase | + | 3.2.1.24 | from API zym |
| 68368 | arginine dihydrolase | - | 3.5.3.6 | from API 20E |
| 68382 | beta-galactosidase | + | 3.2.1.23 | from API zym |
| 68368 | beta-galactosidase | + | 3.2.1.23 | from API 20E |
| 68382 | beta-glucosidase | + | 3.2.1.21 | from API zym |
| 68382 | beta-glucuronidase | - | 3.2.1.31 | from API zym |
| 68382 | cystine arylamidase | - | 3.4.11.3 | from API zym |
| 68382 | esterase (C 4) | + | from API zym | |
| 68382 | esterase lipase (C 8) | + | from API zym | |
| 68368 | gelatinase | + | from API 20E | |
| 68382 | leucine arylamidase | + | 3.4.11.1 | from API zym |
| 68382 | lipase (C 14) | - | from API zym | |
| 68368 | lysine decarboxylase | + | 4.1.1.18 | from API 20E |
| 68382 | N-acetyl-beta-glucosaminidase | + | 3.2.1.52 | from API zym |
| 68382 | naphthol-AS-BI-phosphohydrolase | + | from API zym | |
| 68368 | ornithine decarboxylase | + | 4.1.1.17 | from API 20E |
| 68382 | trypsin | + | 3.4.21.4 | from API zym |
| 68368 | tryptophan deaminase | - | 4.1.99.1 | from API 20E |
| 68368 | urease | + | 3.5.1.5 | from API 20E |
| 68382 | valine arylamidase | + | from API zym |
| @ref | Description | Assembly level | INSDC accession | BV-BRC accession | IMG accession | NCBI tax ID | Score | |
|---|---|---|---|---|---|---|---|---|
| 66792 | ASM1465529v1 assembly for Streptomyces fumanus JCM 4477 | scaffold | GCA_014655295   | 67302.3  | 2997404793  | 67302 | 70.55 | |
| @ref | Description | Accession | Length | Database | NCBI tax ID | |
|---|---|---|---|---|---|---|
| 20218 | Streptomyces fumanus partial 16S rRNA gene, strain ISP 5154 | AJ399463 | 1448 |  | 67302 | |
| 20218 | Streptomyces fumanus gene for 16S ribosomal RNA, partial sequence, strain: JCM 4477 | D44172 | 120 | | 67302 | |
| 20218 | Streptomyces fumanus gene for 16S rRNA, partial sequence, strain: NBRC 13042 | AB184273 | 1477 | | 67302 | |
| 124043 | Streptomyces fumanus strain JCM 4477 16S ribosomal RNA gene, partial sequence. | MT760552 | 607 | | 67302 | |
| @ref | GC-content (mol%) | Method | |
|---|---|---|---|
| 67770 | 72.4 | thermal denaturation, midpoint method (Tm) |
| Topic | Title | Authors | Journal | DOI | Year | |
|---|---|---|---|---|---|---|
| Phylogeny | Two new strains of Streptomyces with metabolic potential for biological control of pear black spot disease. | Chen YH, Zhang JX, Min Y, Liu Y, Wang JM, Bai LQ, Luo XX. | BMC Microbiol | 10.1186/s12866-024-03609-6 | 2024 | |
| Exploring the fibrinolytic potential of marine Actinoalloteichus caeruleus isolated from Bay of Bengal coast. | Suresh KN, C SD. | BMC Microbiol | 10.1186/s12866-025-03815-w | 2025 | | |
| Meroterpenoids Possibly Produced by a Bacterial Endosymbiont of the Tropical Basidiomycete Echinochaete brachypora. | Hassan K, Chepkirui C, Llanos-Lopez NA, Matasyoh JC, Decock C, Marin-Felix Y, Stadler M. | Biomolecules | 10.3390/biom12060755 | 2022 | | |
| Dioxapyrrolomycin biosynthesis in Streptomyces fumanus. | Charan RD, Schlingmann G, Bernan VS, Feng X, Carter GT. | J Nat Prod | 10.1021/np0503404 | 2006 | | |
| Enzymology | Additional pyrrolomycins from cultures of Streptomyces fumanus. | Charan RD, Schlingmann G, Bernan VS, Feng X, Carter GT. | J Nat Prod | 10.1021/np0496542 | 2005 | |
| Fumaquinone, a new prenylated naphthoquinone from Streptomyces fumanus. | Charan RD, Schlingmann G, Bernan VS, Feng X, Carter GT. | J Antibiot (Tokyo) | 10.1038/ja.2005.32 | 2005 | | |
| Pathogenicity | Arylpyrrole and fipronil analogues that inhibit the motility and/or development of Haemonchus contortus in vitro. | Dilrukshi Herath HMP, Song H, Preston S, Jabbar A, Wang T, McGee SL, Hofmann A, Garcia-Bustos J, Chang BCH, Koehler AV, Liu Y, Ma Q, Zhang P, Zhao Q, Wang Q, Gasser RB. | Int J Parasitol Drugs Drug Resist | 10.1016/j.ijpddr.2018.06.002 | 2018 | |
| Pyrrolomycins Are Potent Natural Protonophores. | Valderrama K, Pradel E, Firsov AM, Drobecq H, Bauderlique-le Roy H, Villemagne B, Antonenko YN, Hartkoorn RC. | Antimicrob Agents Chemother | 10.1128/aac.01450-19 | 2019 | | |
| Metabolism | Nitroaromatic compounds, from synthesis to biodegradation. | Ju KS, Parales RE. | Microbiol Mol Biol Rev | 10.1128/mmbr.00006-10 | 2010 | |
| Metabolism | Biotransformation of 2-benzoxazolinone and 2-hydroxy-1,4-benzoxazin-3-one by endophytic fungi isolated from Aphelandra tetragona. | Zikmundova M, Drandarov K, Bigler L, Hesse M, Werner C. | Appl Environ Microbiol | 10.1128/aem.68.10.4863-4870.2002 | 2002 | |
| Phylogeny | Streptomyces triticagri sp. nov. and Streptomyces triticirhizae sp. nov., two novel Actinobacteria isolated from the rhizosphere soil of wheat (Triticum aestivum L.). | Han C, Yu Z, Zhao J, Shi H, Hu J, Yu B, Song J, Shen Y, Xiang W, Wang X | Int J Syst Evol Microbiol | 10.1099/ijsem.0.003727 | 2020 | |
| Phylogeny | Streptomyces andamanensis sp. nov., isolated from soil. | Sripreechasak P, Tamura T, Shibata C, Suwanborirux K, Tanasupawat S | Int J Syst Evol Microbiol | 10.1099/ijsem.0.000987 | 2016 | |
How to citeIf you want to cite this particular strain cite the following doi:
https://doi.org/10.13145/bacdive15208.20251217.10
When using BacDive for research please cite the following paper
BacDive in 2025: the core database for prokaryotic strain data
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