Clostridium symbiosum (CCUG 45577 B)

Name: Clostridium symbiosum (CCUG 45577 B)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 152023

Type strain

Culture col. no. CCUG 45577 B

NCBI tax ID(s) 1512

Special Collections CCUG

Links

Clostridium symbiosum CCUG 45577 B is an anaerobe bacterium that was isolated from Human blood,fever,chills.

anaerobe Bacteria

Name and taxonomic classification

SI-ID 110401

CCUG 45577 B

@ref 20215

Last LPSN update 2026-02-09 11:36:49

Domain Bacteria

Phylum Bacillota

Class Clostridia

Order Eubacteriales

Family Clostridiaceae

Genus Clostridium

Species Clostridium symbiosum

Full scientific name Clostridium symbiosum (Stevens 1956) Kaneuchi et al. 1976 (Approved Lists 1980)

Synonyms (1)

"Bacteroides symbiosus"

BacDive ID	Other strains from **Clostridium symbiosum** (10)	Type strain
2721	C. symbiosum 2, DSM 934, ATCC 14940, LSU (M. Sebald), ... (type strain)
130933	C. symbiosum SRB539-5-G-R, DSM 29356
150600	C. symbiosum CCUG 41715
153376	C. symbiosum CCUG 49377
153644	C. symbiosum CCUG 50474
153779	C. symbiosum CCUG 50960
155139	C. symbiosum CCUG 56568
156494	C. symbiosum CCUG 62167 Q
157675	C. symbiosum LT0011, DSM 108250
158919	C. symbiosum H4_29, DSM 108200

Morphology

Culture and growth conditions

Culture temp

@ref	Growth	Type	Temperature (°C)
56829	positive	growth	37

Physiology and metabolism

Oxygen tolerance

56829

Oxygen toleranceanaerobe

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
68380	29016 ChEBI	arginine	-	hydrolysis	from API rID32A
68380	16024 ChEBI	D-mannose	-	fermentation	from API rID32A
68380	29985 ChEBI	L-glutamate	-	degradation	from API rID32A
68380	17632 ChEBI	nitrate	-	reduction	from API rID32A
68380	16634 ChEBI	raffinose	-	fermentation	from API rID32A
68380	27897 ChEBI	tryptophan	-	energy source	from API rID32A
68380	16199 ChEBI	urea	-	hydrolysis	from API rID32A

Metabolite production

@ref	Chebi-ID	Metabolite	Production
68380	35581 ChEBI	indole		from API rID32A

Metabolite tests

@ref	Chebi-ID	Metabolite	Indole test
68380	35581 ChEBI	indole	-	from API rID32A

Enzymes

@ref	Value	Activity	Ec
68380	alanine arylamidase	-	3.4.11.2	from API rID32A
68380	alkaline phosphatase	-	3.1.3.1	from API rID32A
68380	alpha-arabinosidase	-	3.2.1.55	from API rID32A
68380	alpha-fucosidase	-	3.2.1.51	from API rID32A
68380	alpha-galactosidase	-	3.2.1.22	from API rID32A
68380	alpha-glucosidase	-	3.2.1.20	from API rID32A
68380	arginine dihydrolase	-	3.5.3.6	from API rID32A
68380	beta-galactosidase	+	3.2.1.23	from API rID32A
68380	beta-Galactosidase 6-phosphate	-		from API rID32A
68380	beta-glucosidase	-	3.2.1.21	from API rID32A
68380	beta-glucuronidase	-	3.2.1.31	from API rID32A
68380	glutamate decarboxylase	-	4.1.1.15	from API rID32A
68380	glutamyl-glutamate arylamidase	-		from API rID32A
68380	glycin arylamidase	-		from API rID32A
68380	histidine arylamidase	-		from API rID32A
68380	L-arginine arylamidase	-		from API rID32A
68380	leucine arylamidase	-	3.4.11.1	from API rID32A
68380	leucyl glycin arylamidase	-	3.4.11.1	from API rID32A
68380	N-acetyl-beta-glucosaminidase	-	3.2.1.52	from API rID32A
68380	phenylalanine arylamidase	-		from API rID32A
68380	proline-arylamidase	-	3.4.11.5	from API rID32A
68380	pyrrolidonyl arylamidase	-	3.4.19.3	from API rID32A
68380	serine arylamidase	-		from API rID32A
68380	tryptophan deaminase	-	4.1.99.1	from API rID32A
68380	tyrosine arylamidase	-		from API rID32A
68380	urease	-	3.5.1.5	from API rID32A

Fatty acid profile

Metadata FA analysis

@ref

56829

Fatty acid	Percentage	ECL
C18:1 ω9c	34.6	17.769
C16:0	27.5	16
C18:1 ω9c DMA	9.8	18.226
C18:0	8.7	18
C18:2 ω6,9c/C18:0 ANTE	4.2	17.724
C18:1 ω7c /12t/9t	3.1	17.824
C14:0	2.7	14
C16:1 ω7c	2.5	15.819
unknown 16.754	2.2	16.754
C16:1 ω7c DMA	1	16.288
C16:1 ω11c	1	15.757
C17:1 ISO I/C16:0 DMA	0.9	16.481
unknown 18.177	0.9	18.177
C17:0	0.7	17
C19:0 CYCLO ω9c	0.4	18.87

API rID32A

@ref	URE	ADH (Arg)	alpha GAL	beta GAL	beta-Galactosidase 6-phosphatebeta GP	alpha GLU	beta GLU	alpha ARA	beta GUR	beta-N-Acetyl-beta-glucosaminidasebeta NAG	MNE	RAF	GDC	alpha FUC	Reduction of nitrateNIT	IND	PAL	L-arginine arylamidaseArgA	ProA	LGA	Phenylalanine arylamidasePheA	Leucine arylamidaseLeuA	PyrA	Tyrosine arylamidaseTyrA	Alanine arylamidaseAlaA	Glycin arylamidaseGlyA	Histidine arylamidaseHisA	Glutamyl-glutamate arylamidaseGGA	Serine arylamidaseSerA
56829	-	-	-	+	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Host	#Human	-
#Host Body Product	#Fluids	#Blood
#Infection	#Patient	-

Isolation

@ref	Sample type	Sampling date	Geographic location	Country	Country ISO 3 Code	Continent
56829	Human blood,fever,chills	2001-08-18	Karlstad	Sweden	SWE	Europe

Interaction and safety

Sequence information

Genome-based predictions

Literature

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#56829	Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 45577 B
#68380	Automatically annotated from API rID32A .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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