Methylorubrum extorquens (CCUG 45294)

Name: Methylorubrum extorquens (CCUG 45294)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 151944

Type strain

Culture col. no. CCUG 45294

NCBI tax ID(s) 408

Special Collections CCUG

Links

Methylorubrum extorquens CCUG 45294 is a bacterium that was isolated from Human intestinal mucosa,45-yr-old patient.

Bacteria

Name and taxonomic classification

SI-ID 110330

CCUG 45294

@ref 20215

Last LPSN update 2026-02-09 11:36:47

Domain Bacteria

Phylum Pseudomonadota

Class Alphaproteobacteria

Order Hyphomicrobiales

Family Methylobacteriaceae

Genus Methylorubrum

Species Methylorubrum extorquens

Full scientific name Methylorubrum extorquens (Urakami and Komagata 1984 ex Bassalik 1913) Green and Ardley 2018

Synonyms (2)

Protomonas extorquens
Methylobacterium extorquens

BacDive ID	Other strains from **Methylorubrum extorquens** (29)	Type strain
7142	M. extorquens TK 0001, DSM 1337, ATCC 43645, NCIMB 9399, ... (type strain)
7143	M. extorquens 0355, D355, AM1, DSM 1338, ATCC 14718, NCIB ...
7144	M. extorquens M27, CCUG 2484, JCM 2806, DSM 1339, NCIB ...
7145	M. extorquens DSM 1340, ATCC 8457, NCIB 2879, NCTC 2879, ...
7146	M. extorquens DM4, DSM 6343, CIP 106787, VKM B-2191
7147	M. extorquens ID 585-99, isolate F, DSM 13060
7148	M. extorquens PA1, DSM 23939
130397	M. extorquens T2_29, DSM 31003
142639	M. extorquens CCUG 13494
143958	M. extorquens CCUG 22060
146165	M. extorquens CCUG 30489
146708	M. extorquens CCUG 32000
146755	M. extorquens CCUG 32070
153710	M. extorquens CCUG 50714
153711	M. extorquens CCUG 50715
154971	M. extorquens CCUG 55903, NCIMB 13688, VKM B-2223
162982	M. extorquens JCM 20693, IAM 12623
163424	M. extorquens JCM 2803, IAM 12639, NCIMB 10409
163425	M. extorquens JCM 2808, ATCC 21612
163426	M. extorquens JCM 2809, ATCC 21613
163428	M. extorquens JCM 2812, NCIMB 10598
163429	M. extorquens JCM 2813, NCIMB 10599
163430	M. extorquens JCM 2814, NCIMB 10600
163433	M. extorquens JCM 2817, NCIMB 10601
163434	M. extorquens JCM 2818, NCIMB 10603
163452	M. extorquens JCM 2826, NCIMB 10605
163460	M. extorquens JCM 2827, ATCC 21438
163505	M. extorquens JCM 2832, NCIMB 11350
163506	M. extorquens JCM 2834, NRRL B-3449

Morphology

Culture and growth conditions

Physiology and metabolism

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
68369	17128 ChEBI	adipate	-	assimilation	from API 20NE
68369	29016 ChEBI	arginine	-	hydrolysis	from API 20NE
68369	17634 ChEBI	D-glucose	-	assimilation	from API 20NE
68369	17634 ChEBI	D-glucose	-	fermentation	from API 20NE
68369	16899 ChEBI	D-mannitol	-	assimilation	from API 20NE
68369	16024 ChEBI	D-mannose	-	assimilation	from API 20NE
68369	27689 ChEBI	decanoate	-	assimilation	from API 20NE
68369	4853 ChEBI	esculin	-	hydrolysis	from API 20NE
68369	5291 ChEBI	gelatin	-	hydrolysis	from API 20NE
68369	24265 ChEBI	gluconate	-	assimilation	from API 20NE
68369	30849 ChEBI	L-arabinose	+	assimilation	from API 20NE
68369	25115 ChEBI	malate	+	assimilation	from API 20NE
68369	17306 ChEBI	maltose	-	assimilation	from API 20NE
68369	59640 ChEBI	N-acetylglucosamine	-	assimilation	from API 20NE
68369	17632 ChEBI	nitrate	-	reduction	from API 20NE
68369	27897 ChEBI	tryptophan	-	energy source	from API 20NE
68369	16199 ChEBI	urea	+	hydrolysis	from API 20NE

Metabolite production

@ref	Chebi-ID	Metabolite	Production
68369	35581 ChEBI	indole		from API 20NE

Metabolite tests

@ref	Chebi-ID	Metabolite	Indole test
68369	35581 ChEBI	indole	-	from API 20NE

Enzymes

@ref	Value	Activity	Ec
68382	acid phosphatase	-	3.1.3.2	from API zym
68382	alkaline phosphatase	+	3.1.3.1	from API zym
68382	alpha-chymotrypsin	-	3.4.21.1	from API zym
68382	alpha-fucosidase	-	3.2.1.51	from API zym
68382	alpha-galactosidase	-	3.2.1.22	from API zym
68382	alpha-glucosidase	-	3.2.1.20	from API zym
68382	alpha-mannosidase	-	3.2.1.24	from API zym
68369	arginine dihydrolase	-	3.5.3.6	from API 20NE
68382	beta-galactosidase	-	3.2.1.23	from API zym
68382	beta-glucosidase	-	3.2.1.21	from API zym
68369	beta-glucosidase	-	3.2.1.21	from API 20NE
68382	beta-glucuronidase	-	3.2.1.31	from API zym
68382	cystine arylamidase	-	3.4.11.3	from API zym
68369	cytochrome oxidase	+	1.9.3.1	from API 20NE
68382	esterase (C 4)	-		from API zym
68382	esterase lipase (C 8)	-		from API zym
68369	gelatinase	-		from API 20NE
68382	leucine arylamidase	+	3.4.11.1	from API zym
68382	lipase (C 14)	-		from API zym
68382	N-acetyl-beta-glucosaminidase	-	3.2.1.52	from API zym
68382	naphthol-AS-BI-phosphohydrolase	-		from API zym
68382	trypsin	-	3.4.21.4	from API zym
68369	urease	+	3.5.1.5	from API 20NE
68382	valine arylamidase	-		from API zym

API zym

@ref	Control	Alkaline phosphatase	Esterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	Lipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	Trypsin	alpha- Chymotrypsin	Acid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	alpha- Galactosidase	beta- Galactosidase	beta- Glucuronidase	alpha- Glucosidase	beta- Glucosidase	N-acetyl-beta- glucosaminidase	alpha- Mannosidase	alpha- Fucosidase
56720	-	+	-	-	-	+	-	-	-	-	-	-	-	-	-	-	-	-	-	-

API 20NE

@ref	Reduction of nitratesNO3	TRP	GLU_ Ferm	ADH (Arg)	URE	ESC	GEL	PNPG	GLU_ Assim	ARA	MNE	MAN	NAG	MAL	GNT	CAP	ADI	MLT	CIT	PAC	OX
56720	-	-	-	-	+	-	-	-	-	+	-	-	-	-	-	-	-	+	-	-	+

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2
#Host	#Human
#Host Body-Site	#Gastrointestinal tract
#Infection	#Patient

Isolation

@ref	Sample type	Sampling date	Geographic location	Country	Country ISO 3 Code	Continent
56720	Human intestinal mucosa,45-yr-old patient	2001-04-26	Göteborg	Sweden	SWE	Europe

Interaction and safety

Sequence information

Genome-based predictions

Literature

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#56720	Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 45294
#68369	Automatically annotated from API 20NE .
#68382	Automatically annotated from API zym .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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