Name: Streptomyces flavovirens Heim
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 15165

Type strain:

Species: Streptomyces flavovirens

Strain Designation: Heim

Culture col. no.: DSM 40323, ATCC 25452, CBS 101.34, IFO 13040, ISP 5323, NBRC 13040, RIA 1232, JCM 4475, BCRC 13440, CBS 685.69, CECT 3327, CGMCC 4.1834, CGMCC 4.2112, IMET 43576, KCTC 9778, MTCC 4728, NBIMCC 1153, NRRL B-1671, VKM Ac-1325, VTT E-02158

Strain history: KCC S-0475 <-- IFO 13040 <-- SAJ <-- ISP 5323 <-- CBS 101.34 <-- J. Duché strain Heim.

NCBI tax ID(s): 67299 (species)

SI-ID 38555

ATCC 25452, IFO 13040, DSM 40323, JCM 4475, CCRC 13440, IMET 43576, NRRL B-1671, VKM Ac-1325, CBS101.34, CECT 3327, NRRL 8139, VTT E-82158, KCTC 9778, NBRC 13040, BCRC 13440, NBIMCC 1153, CGMCC 4.1834, CGMCC 4.1884, CGMCC 4.2112, VTT E-02158, AS 4.1884

Other strains from Streptomyces flavovirens

S. flavovirens DSM 40062, ATCC 19758, ATCC 3320, ... (type strain)
S. flavovirens DSM 40071, ATCC 19791, CBS 543.68, ...
S. flavovirens DSM 46453, IMET 40610, IPV 169x
S. flavovirens STI43408(IMET), IFO 13489, INA ...
S. flavovirens ST005125(HKI), China, IMET 40341
S. flavovirens STI40342(IMET), 40342, N-220 "China", ...
S. flavovirens I. A. F. 45 CD, DSM 40990, ATCC ...
S. flavovirens MPB4-2, MPB4-2(A4), DSM 41966

Section

Streptomyces flavovirens Heim is a mesophilic bacterium that builds an aerial mycelium and was isolated from soil.

mesophilic
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Actinomycetota*
	Class	*Actinomycetes*
	Order	*Kitasatosporales*
	Family	*Streptomycetaceae*
	Genus	*Streptomyces*
	Species	**Streptomyces flavovirens**
	Full Scientific Name (LPSN)	Streptomyces flavovirens (Waksman 1923) Waksman and Henrici 1948 (Approved Lists 1980)

	Synonym	"Actinomyces* flavogriseus"*
	Synonym	"Actinomyces* flavovirens"*
	Synonym	Streptomyces nigrifaciens
	Synonym	Streptomyces flavogriseus

Information on morphological and physiological properties Morphology

[Ref.: #19811]	Colony color	Maize yellow
[Ref.: #19811]	Incubation period	10-14 days
[Ref.: #19811]	Cultivation medium used	ISP 2

[Ref.: #19811]	Colony color	Lemon yellow
[Ref.: #19811]	Incubation period	10-14 days
[Ref.: #19811]	Cultivation medium used	ISP 3

[Ref.: #19811]	Colony color	Sand yellow
[Ref.: #19811]	Incubation period	10-14 days
[Ref.: #19811]	Cultivation medium used	ISP 4

[Ref.: #19811]	Colony color	Sand yellow
[Ref.: #19811]	Incubation period	10-14 days
[Ref.: #19811]	Cultivation medium used	ISP 5

[Ref.: #19811]	Colony color	Sand yellow
[Ref.: #19811]	Incubation period	10-14 days
[Ref.: #19811]	Cultivation medium used	ISP 6

[Ref.: #19811]	Colony color	Sand yellow
[Ref.: #19811]	Incubation period	10-14 days
[Ref.: #19811]	Cultivation medium used	ISP 7

[Ref.: #19811]	Multicellular complex forming ability	yes
[Ref.: #19811]	Multicellular complex name	Aerial Mycelium
[Ref.: #19811]	Medium Name (multicellularity)	ISP 2

[Ref.: #19811]	Multicellular complex forming ability	yes
[Ref.: #19811]	Multicellular complex name	Aerial Mycelium
[Ref.: #19811]	Multicellular complex color	Silk grey
[Ref.: #19811]	Medium Name (multicellularity)	ISP 3

[Ref.: #19811]	Multicellular complex forming ability	yes
[Ref.: #19811]	Multicellular complex name	Aerial Mycelium
[Ref.: #19811]	Multicellular complex color	Silk grey
[Ref.: #19811]	Medium Name (multicellularity)	ISP 4

[Ref.: #19811]	Multicellular complex forming ability	yes
[Ref.: #19811]	Multicellular complex name	Aerial Mycelium
[Ref.: #19811]	Medium Name (multicellularity)	ISP 5

[Ref.: #19811]	Multicellular complex forming ability	yes
[Ref.: #19811]	Multicellular complex name	Aerial Mycelium
[Ref.: #19811]	Medium Name (multicellularity)	ISP 6

[Ref.: #19811]	Multicellular complex forming ability	yes
[Ref.: #19811]	Multicellular complex name	Aerial Mycelium
[Ref.: #19811]	Medium Name (multicellularity)	ISP 7

Information on culture and growth conditions Culture and growth conditions

[Ref.: #9461]

Culture medium

GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)

[Ref.: #9461]

Culture medium growth

[Ref.: #9461]

Culture medium link

Medium recipe at MediaDive

[Ref.: #9461]

Culture medium composition

expand / minimize

[Ref.: #19811]

Culture medium

ISP 2

[Ref.: #19811]

Culture medium growth

[Ref.: #19811]

Culture medium composition

expand / minimize

[Ref.: #19811]

Culture medium

ISP 3

[Ref.: #19811]

Culture medium growth

[Ref.: #19811]

Culture medium composition

expand / minimize

[Ref.: #19811]

Culture medium

ISP 4

[Ref.: #19811]

Culture medium growth

[Ref.: #19811]

Culture medium composition

expand / minimize

[Ref.: #19811]

Culture medium

ISP 5

[Ref.: #19811]

Culture medium growth

[Ref.: #19811]

Culture medium composition

expand / minimize

[Ref.: #19811]

Culture medium

ISP 6

[Ref.: #19811]

Culture medium growth

[Ref.: #19811]

Culture medium composition

expand / minimize

[Ref.: #19811]

Culture medium

ISP 7

[Ref.: #19811]

Culture medium growth

[Ref.: #19811]

Culture medium composition

expand / minimize

[Ref.: #9461]

Culture medium

ROLLED OATS MINERAL MEDIUM (DSMZ Medium 84)

[Ref.: #9461]

Culture medium growth

[Ref.: #9461]

Culture medium link

Medium recipe provided by DSMZ

		Temperature
[Ref.: #9461]	growth	28 °C
[Ref.: #19811]	optimum	28 °C
[Ref.: #67770]	growth	28 °C

[Ref.: #9461]	Temperature range	mesophilic
[Ref.: #19811]	Temperature range	mesophilic
[Ref.: #67770]	Temperature range	mesophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #9461]

Name of produced compound

flavofungin

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #68368]	arginine ChEBI	+	hydrolysis	* from API 20E
[Ref.: #68368]	citrate ChEBI	+	assimilation	* from API 20E
[Ref.: #68368]	gelatin ChEBI	+	hydrolysis	* from API 20E
[Ref.: #68368]	lysine ChEBI	+	degradation	* from API 20E
[Ref.: #68368]	ornithine ChEBI	+	degradation	* from API 20E
[Ref.: #68368]	tryptophan ChEBI	-	energy source	* from API 20E
[Ref.: #68368]	urea ChEBI	+	hydrolysis	* from API 20E

	Metabolite	Production
[Ref.: #68368]	acetoin ChEBI	yes	* from API 20E
[Ref.: #68368]	hydrogen sulfide ChEBI	no	* from API 20E
[Ref.: #68368]	indole ChEBI	no	* from API 20E

	Physiological tests	Metabolite	Voges-Proskauer-test	Indole test
[Ref.: #68368]		acetoin ChEBI	+		* from API 20E
[Ref.: #68368]		indole ChEBI		-	* from API 20E

	Enzyme	Enzyme activity	EC number
[Ref.: #68382]	acid phosphatase	+	3.1.3.2	* from API zym
[Ref.: #68382]	alkaline phosphatase	+	3.1.3.1	* from API zym
[Ref.: #68382]	alpha-chymotrypsin	+	3.4.21.1	* from API zym
[Ref.: #68382]	alpha-fucosidase	-	3.2.1.51	* from API zym
[Ref.: #68382]	alpha-galactosidase	-	3.2.1.22	* from API zym
[Ref.: #68382]	alpha-glucosidase	+	3.2.1.20	* from API zym
[Ref.: #68382]	alpha-mannosidase	-	3.2.1.24	* from API zym
[Ref.: #68368]	arginine dihydrolase	+	3.5.3.6	* from API 20E
[Ref.: #68368]	beta-galactosidase	+	3.2.1.23	* from API 20E, API zym
[Ref.: #68382]	beta-glucosidase	+	3.2.1.21	* from API zym
[Ref.: #68382]	beta-glucuronidase	-	3.2.1.31	* from API zym
[Ref.: #68382]	cystine arylamidase	+	3.4.11.3	* from API zym
[Ref.: #68382]	esterase (C 4)	+		* from API zym
[Ref.: #68382]	esterase lipase (C 8)	+		* from API zym
[Ref.: #68368]	gelatinase	+		* from API 20E
[Ref.: #68382]	leucine arylamidase	+	3.4.11.1	* from API zym
[Ref.: #68382]	lipase (C 14)	+		* from API zym
[Ref.: #68368]	lysine decarboxylase	+	4.1.1.18	* from API 20E
[Ref.: #68382]	N-acetyl-beta-glucosaminidase	+	3.2.1.52	* from API zym
[Ref.: #68382]	naphthol-AS-BI-phosphohydrolase	+		* from API zym
[Ref.: #68368]	ornithine decarboxylase	+	4.1.1.17	* from API 20E
[Ref.: #68382]	trypsin	+	3.4.21.4	* from API zym
[Ref.: #68368]	tryptophan deaminase	-	4.1.99.1	* from API 20E
[Ref.: #68368]	urease	+	3.5.1.5	* from API 20E
[Ref.: #68382]	valine arylamidase	+		* from API zym
	Only first 10 entries are displayed. Click here to see all.

API® 20E:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	beta-GalactosidaseONPG	Arginine dihydrolaseADH (Arg)	Lysine decarboxylaseLDC (Lys)	Ornithine decarboxylaseODC	Citrate utilizationCIT	H2S productionH2S	Urease/urea hydrolysisURE	Tryptophan deaminaseTDA (Trp)	Indole productionIND	Acetoin production (Voges Proskauer test)VP	Gelatinase/gelatin hydrolysisGEL	Fermentation/oxidation of D-glucoseGLU	Fermentation/oxidation of D-mannitolMAN	Fermentation/oxidation of inositolINO	Fermentation/oxidation of sorbitolSor	Fermentation/oxidation of L-rhamnoseRHA	Fermentation/oxidation of sucroseSAC	Fermentation/oxidation of melibioseMEL	Fermentation/oxidation of amygdalinAMY	Fermentation/oxidation of L-arabinoseARA	Cytochrome oxidaseOX	Nitrite productionNO2	Reduction to N2N2	MotilityMOB	Growth on MacConkey mediumMAC	Oxidative catabolisation of D-glucoseOF-O	Fermentation of D-glucoseOF-F
[Ref.: #19811]	523	+	+	+	+	+	-	+	-	-	+	+	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.

API® zym:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Control	2-naphthyl phosphateAlkaline phosphatase	2-naphthyl butyrateEsterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	2-naphthyl myristateLipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	N-benzoyl-DL-arginine-2-naphthylamideTrypsin	N-glutaryl-phenylalanine-2-naphthylamidealpha- Chymotrypsin	2-naphthyl phosphateAcid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	6-Br-2-naphthyl-alphaD-galactpyranosidealpha- Galactosidase	2-naphthyl-betaD-galactpyranosidebeta- Galactosidase	Naphthol-AS-BI-betaD-glucuronidebeta- Glucuronidase	2-naphthyl-alphaD-glucopyranosidealpha- Glucosidase	6-Br-2-naphthyl-betaD-glucopyranosidebeta- Glucosidase	1-naphthyl-N-acetyl-betaD-glucosaminideN-acetyl-beta- glucosaminidase	6-Br-2-naphthyl-alphaD-mannopyranosidealpha- Mannosidase	2-naphthyl-alphaL-fucopyranosidealpha- Fucosidase
[Ref.: #19811]	631	not determinedn.d.	+	+	+	+	+	+	+	+	+	+	+	-	+	-	+	+	+	-	-

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #9461]	Sample type/isolated from	soil
[Ref.: #9461]	Geographic location (country and/or sea, region)	Martinique
[Ref.: #9461]	Country	France
[Ref.: #9461]	Country ISO 3 Code	FRA
[Ref.: #9461]	Continent	Europe
* marker position based on {}

Isolation sources categories

#Environmental

#Terrestrial

#Soil

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence AB184271 (>99% sequence identity) for Streptomyces from Microbeatlas

Aquatic Samples	286
Soil Samples	2441
Animal Samples	1009
Plant Samples	294
Total Samples	4030

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #9461]	Biosafety level	1	Risk group (German classification) According to TRBA 466
[Ref.: #19811]	Biosafety level	1	Risk group (German classification)

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #9461]	Streptomyces flavogriseus partial 16S rRNA gene, type strain CBS 101.34T	AJ494864	1518	ENA	67299 tax ID
[Ref.: #20218]	Streptomyces flavogriseus gene for 16S rRNA, partial sequence, strain: NBRC 13040	AB184271	1477	ENA	67299 tax ID	*

Availability in culture collections External links

[Ref.: #9461]

Culture collection no.

DSM 40323, ATCC 25452, CBS 101.34, IFO 13040, ISP 5323, NBRC 13040, RIA 1232, JCM 4475, BCRC 13440, CBS 685.69, CECT 3327, CGMCC 4.1834, CGMCC 4.2112, IMET 43576, KCTC 9778, MTCC 4728, NBIMCC 1153, NRRL B-1671, VKM Ac-1325, VTT E-02158

[Ref.: #84269]

SI-ID 38555

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Classification of Streptomyces phylogroup pratensis (Doroghazi and Buckley, 2010) based on genetic and phenotypic evidence, and proposal of Streptomyces pratensis sp. nov.	Rong X, Doroghazi JR, Cheng K, Zhang L, Buckley DH, Huang Y	Syst Appl Microbiol	10.1016/j.syapm.2013.03.010	2013	*

References

#9461

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 40323

#19811

Wink, J.: Compendium of Actinobacteria. HZI-Helmholtz-Centre for Infection Research, Braunschweig .

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#68368

Automatically annotated from API 20E .

#68382

Automatically annotated from API zym .

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#84269

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID38555.1 )

* These data were automatically processed and therefore are not curated

Change proposal

You found an error in BacDive? Please tell us about it!

Note that changes will be reviewed and judged. If your changes are legitimate, changes will occur within the next BacDive update. Only proposed changes supported by the according reference will be reviewed. The BacDive team reserves the right to reject proposed changes.

Search for species Streptomyces flavovirens in external resources:
SILVA
BRENDA
PANGAEA
StrainInfo
GBIF