Name: Streptomyces fimbriatus DSM 40942
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 15142

Type strain:

Species: Streptomyces fimbriatus

Culture col. no.: DSM 40942, ATCC 15051, CBS 453.65, NRRL B-3175, JCM 5080, CGMCC 4.1598, IFO 15411, KCTC 19940, MTCC 1768, NBRC 15411, NCIMB 13039, VKM Ac-761

Strain history: NRRL B-3175 <-- ATCC 15051 <-- E. R. Squibb & Sons, Inc.; SC-3683.

NCBI tax ID(s): 68197 (species)

SI-ID 36248

ATCC 15051, NRRL B-3175, DSM 40942, JCM 5080, VKM Ac-761, NCIMB 13039, IFO 15411, CBS 453.65, AS 4.1598, NBRC 15411, KCTC 19940, CGMCC 4.1598

Special Collections

Section

When using BacDive for research please cite our paper

Streptomyces fimbriatus DSM 40942 is a spore-forming, mesophilic bacterium that builds an aerial mycelium and produces antibiotic compounds.

antibiotic compound production
spore-forming
mesophilic
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	09-12-2024 (DD-MM-YYYY)
	Domain	*Bacteria*
	Phylum	*Actinomycetota*
	Class	*Actinomycetes*
	Order	*Kitasatosporales*
	Family	*Streptomycetaceae*
	Genus	*Streptomyces*
	Species	**Streptomyces fimbriatus**
	Full Scientific Name (LPSN)	Streptomyces fimbriatus (Millard and Burr 1926) Waksman and Lechevalier 1953 (Approved Lists 1980)

Synonym

"Actinomyces fimbriatus"

Information on morphological and physiological properties Morphology

[Ref.: #19494]	Colony color	Yellow
[Ref.: #19494]	Incubation period	10-14 days
[Ref.: #19494]	Cultivation medium used	ISP 2

[Ref.: #19494]	Colony color	Yellow
[Ref.: #19494]	Incubation period	10-14 days
[Ref.: #19494]	Cultivation medium used	ISP 4

[Ref.: #19494]	Colony color	Yellow
[Ref.: #19494]	Incubation period	10-14 days
[Ref.: #19494]	Cultivation medium used	ISP 5

[Ref.: #19494]	Colony color	Yellow
[Ref.: #19494]	Incubation period	10-14 days
[Ref.: #19494]	Cultivation medium used	ISP 6

[Ref.: #19494]	Colony color	Yellow
[Ref.: #19494]	Incubation period	10-14 days
[Ref.: #19494]	Cultivation medium used	ISP 7

[Ref.: #19494]	Incubation period	10-14 days
[Ref.: #19494]	Cultivation medium used	ISP 3

[Ref.: #19494]	Multicellular complex forming ability	yes
[Ref.: #19494]	Multicellular complex name	Aerial Mycelium
[Ref.: #19494]	Multicellular complex color	Grey
[Ref.: #19494]	Medium Name (multicellularity)	ISP 2

[Ref.: #19494]	Multicellular complex forming ability	yes
[Ref.: #19494]	Multicellular complex name	Aerial Mycelium
[Ref.: #19494]	Multicellular complex color	Grey
[Ref.: #19494]	Medium Name (multicellularity)	ISP 3

[Ref.: #19494]	Multicellular complex forming ability	yes
[Ref.: #19494]	Multicellular complex name	Aerial Mycelium
[Ref.: #19494]	Multicellular complex color	Grey
[Ref.: #19494]	Medium Name (multicellularity)	ISP 4

[Ref.: #19494]	Multicellular complex forming ability	yes
[Ref.: #19494]	Multicellular complex name	Aerial Mycelium
[Ref.: #19494]	Multicellular complex color	Grey
[Ref.: #19494]	Medium Name (multicellularity)	ISP 5

[Ref.: #19494]	Multicellular complex forming ability	no
[Ref.: #19494]	Medium Name (multicellularity)	ISP 6

[Ref.: #19494]	Multicellular complex forming ability	yes
[Ref.: #19494]	Multicellular complex name	Aerial Mycelium
[Ref.: #19494]	Multicellular complex color	Grey
[Ref.: #19494]	Medium Name (multicellularity)	ISP 7

Information on culture and growth conditions Culture and growth conditions

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Culture medium

GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)

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Medium recipe at MediaDive

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Culture medium composition

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Culture medium

ISP 2

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Culture medium

ISP 3

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ISP 4

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Culture medium

ISP 5

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ISP 6

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ISP 7

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Culture medium

ROLLED OATS MINERAL MEDIUM (DSMZ Medium 84)

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Culture medium

STARCH - MINERAL SALT - AGAR (STMS) (DSMZ Medium 252)

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		Temperature
[Ref.: #9905]	growth	28 °C
[Ref.: #19494]	optimum	28 °C
[Ref.: #67770]	growth	28 °C

Information on physiology and metabolism Physiology and metabolism

[Ref.: #19494]	Spore description	Formation of spore chains (spirales)(Sp), spore surface smooth
[Ref.: #19494]	Type of spore	spore
[Ref.: #19494]	Ability of spore formation	yes

[Ref.: #9905]	Name of produced compound	septacidin
[Ref.: #9905]	Name of produced compound	restriction endonuclease SfiI
[Ref.: #19494]	Name of produced compound	Cephamycin B
[Ref.: #19494]	Name of produced compound	Streptenole
[Ref.: #19494]	Name of produced compound	Septacidin

	Halophily	Salt	Tested relation		Salt conc.
[Ref.: #19494]		NaCl		growth	0	%

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #19494]	arabinose ChEBI	+
[Ref.: #68368]	arginine ChEBI	-	hydrolysis	* from API 20E
[Ref.: #19494]	cellulose ChEBI	-
[Ref.: #68368]	citrate ChEBI	-	assimilation	* from API 20E
[Ref.: #19494]	fructose ChEBI	+
[Ref.: #68368]	gelatin ChEBI	-	hydrolysis	* from API 20E
[Ref.: #19494]	glucose ChEBI	+
[Ref.: #68368]	lysine ChEBI	-	degradation	* from API 20E
[Ref.: #19494]	mannitol ChEBI	+
[Ref.: #19494]	myo-inositol ChEBI	-
[Ref.: #68368]	ornithine ChEBI	-	degradation	* from API 20E
[Ref.: #19494]	raffinose ChEBI	-
[Ref.: #19494]	rhamnose ChEBI	-
[Ref.: #19494]	sucrose ChEBI	+
[Ref.: #68368]	tryptophan ChEBI	-	energy source	* from API 20E
[Ref.: #68368]	urea ChEBI	-	hydrolysis	* from API 20E
[Ref.: #19494]	xylose ChEBI	+
	Only first 10 entries are displayed. Click here to see all.

	Metabolite	Production
[Ref.: #68368]	acetoin ChEBI	no	* from API 20E
[Ref.: #68368]	hydrogen sulfide ChEBI	no	* from API 20E
[Ref.: #68368]	indole ChEBI	no	* from API 20E

	Physiological tests	Metabolite	Voges-Proskauer-test	Indole test
[Ref.: #68368]		acetoin ChEBI	-		* from API 20E
[Ref.: #68368]		indole ChEBI		-	* from API 20E

	Enzyme	Enzyme activity	EC number
[Ref.: #68368]	arginine dihydrolase	-	3.5.3.6	* from API 20E
[Ref.: #68368]	beta-galactosidase	+	3.2.1.23	* from API 20E
[Ref.: #68368]	gelatinase	-		* from API 20E
[Ref.: #68368]	lysine decarboxylase	-	4.1.1.18	* from API 20E
[Ref.: #68368]	ornithine decarboxylase	-	4.1.1.17	* from API 20E
[Ref.: #68368]	tryptophan deaminase	+	4.1.99.1	* from API 20E
[Ref.: #68368]	urease	-	3.5.1.5	* from API 20E

API® 20E:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	beta-GalactosidaseONPG	Arginine dihydrolaseADH (Arg)	Lysine decarboxylaseLDC (Lys)	Ornithine decarboxylaseODC	Citrate utilizationCIT	H2S productionH2S	Urease/urea hydrolysisURE	Tryptophan deaminaseTDA (Trp)	Indole productionIND	Acetoin production (Voges Proskauer test)VP	Gelatinase/gelatin hydrolysisGEL	Fermentation/oxidation of D-glucoseGLU	Fermentation/oxidation of D-mannitolMAN	Fermentation/oxidation of inositolINO	Fermentation/oxidation of sorbitolSor	Fermentation/oxidation of L-rhamnoseRHA	Fermentation/oxidation of sucroseSAC	Fermentation/oxidation of melibioseMEL	Fermentation/oxidation of amygdalinAMY	Fermentation/oxidation of L-arabinoseARA	Cytochrome oxidaseOX	Nitrite productionNO2	Reduction to N2N2	MotilityMOB	Growth on MacConkey mediumMAC	Oxidative catabolisation of D-glucoseOF-O	Fermentation of D-glucoseOF-F
[Ref.: #19494]	352	+	-	-	-	-	-	-	+	-	-	-	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #9905]	Sample type/isolated from	soil
* marker position based on {}

Isolation sources categories

#Environmental

#Terrestrial

#Soil

What are isolation sources categories?

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #9905]	Biosafety level	1	Risk group (German classification) According to TRBA 466
[Ref.: #19494]	Biosafety level	1	Risk group (German classification)

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #20218]	Streptomyces fimbriatus strain DSM 40942 16S ribosomal RNA gene, partial sequence	AY999844	1423	GenBank ENA	68197 tax ID	*
[Ref.: #20218]	Streptomyces fimbriatus gene for 16S rRNA, partial sequence, strain: NBRC 15411	AB184659	1463	GenBank ENA	68197 tax ID	*

Availability in culture collections External links

[Ref.: #9905]

Culture collection no.

DSM 40942, ATCC 15051, CBS 453.65, NRRL B-3175, JCM 5080, CGMCC 4.1598, IFO 15411, KCTC 19940, MTCC 1768, NBRC 15411, NCIMB 13039, VKM Ac-761

[Ref.: #84246]

SI-ID 36248

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Streptomyces alkalithermotolerans sp. nov., a novel alkaliphilic and thermotolerant actinomycete isolated from a soda lake.	Sultanpuram VR, Mothe T, Mohammed F	Antonie Van Leeuwenhoek	10.1007/s10482-014-0332-z	2014	*
Phylogeny	Streptomyces calidiresistens sp. nov., isolated from a hot spring sediment.	Duan YY, Ming H, Dong L, Yin YR, Zhang Y, Zhou EM, Liu L, Nie GX, Li WJ	Antonie Van Leeuwenhoek	10.1007/s10482-014-0180-x	2014	*

References

#9905

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 40942

#19494

Wink, J.: Compendium of Actinobacteria. HZI-Helmholtz-Centre for Infection Research, Braunschweig .

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#68368

Automatically annotated from API 20E .

#84246

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID36248.1 )

* These data were automatically processed and therefore are not curated

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