Name: Streptomyces cyaneofuscatus DSM 40148
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 15115

Type strain:

Species: Streptomyces cyaneofuscatus

Culture col. no.: DSM 40148, ATCC 19746, ATCC 23619, CBS 485.68, ETH 24190, IFO 13190, INA 99/54, ISP 5148, NBRC 13190, RIA 1027, JCM 4364, BCRC 11467, CGMCC 4.1612, IMET 41583, KCCM 40517, NCIMB 13021, NRRL B-2570, VKM Ac-752, VTT E-072752

Strain history: KCC S-0364 <-- IFO 13190 <-- SAJ <-- ISP 5148 <-- INA 99/54.

NCBI tax ID(s): 66883 (species)

SI-ID 38130

ATCC 23619, ATCC 19746, IFO 13190, DSM 40148, JCM 4364, CCRC 11467, IMET 41583, NRRL B-2570, VKM Ac-752, NCIMB 13021, CBS 485.68, CBS 112.60, AS 4.1612, NBRC 13190, BCRC 11467, CGMCC 4.1612, VTT E-072752

Special Collections

Other strains from Streptomyces cyaneofuscatus

Section

Streptomyces cyaneofuscatus DSM 40148 is a spore-forming, Gram-positive bacterium that builds an aerial mycelium and was isolated from soil.

Gram-positive
spore-forming
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Actinomycetota*
	Class	*Actinomycetes*
	Order	*Kitasatosporales*
	Family	*Streptomycetaceae*
	Genus	*Streptomyces*
	Species	**Streptomyces cyaneofuscatus**
	Full Scientific Name (LPSN)	Streptomyces cyaneofuscatus (Kudrina 1957) Pridham et al. 1958 (Approved Lists 1980)

	Synonym	Streptomyces cavourensis subsp. washingtonensis
	Synonym	"Actinomyces* cyaneofuscatus"*

Information on morphological and physiological properties Morphology

[Ref.: #69480]	Gram stain	positive Confidence in %93.278

[Ref.: #19410]	Colony color	Sand yellow
[Ref.: #19410]	Incubation period	10-14 days
[Ref.: #19410]	Cultivation medium used	ISP 2

[Ref.: #19410]	Colony color	Sand yellow
[Ref.: #19410]	Incubation period	10-14 days
[Ref.: #19410]	Cultivation medium used	ISP 3

[Ref.: #19410]	Colony color	Sand yellow
[Ref.: #19410]	Incubation period	10-14 days
[Ref.: #19410]	Cultivation medium used	ISP 4

[Ref.: #19410]	Colony color	Green beige
[Ref.: #19410]	Incubation period	10-14 days
[Ref.: #19410]	Cultivation medium used	ISP 5

[Ref.: #19410]	Colony color	Sand yellow
[Ref.: #19410]	Incubation period	10-14 days
[Ref.: #19410]	Cultivation medium used	ISP 6

[Ref.: #19410]	Colony color	Brown beige
[Ref.: #19410]	Incubation period	10-14 days
[Ref.: #19410]	Cultivation medium used	ISP 7

[Ref.: #19410]	Multicellular complex forming ability	no
[Ref.: #19410]	Medium Name (multicellularity)	ISP 2

[Ref.: #19410]	Multicellular complex forming ability	yes
[Ref.: #19410]	Multicellular complex name	Aerial Mycelium
[Ref.: #19410]	Medium Name (multicellularity)	ISP 3

[Ref.: #19410]	Multicellular complex forming ability	yes
[Ref.: #19410]	Multicellular complex name	Aerial Mycelium
[Ref.: #19410]	Medium Name (multicellularity)	ISP 4

[Ref.: #19410]	Multicellular complex forming ability	no
[Ref.: #19410]	Medium Name (multicellularity)	ISP 5

[Ref.: #19410]	Multicellular complex forming ability	no
[Ref.: #19410]	Medium Name (multicellularity)	ISP 6

[Ref.: #19410]	Multicellular complex forming ability	no
[Ref.: #19410]	Medium Name (multicellularity)	ISP 7

Information on culture and growth conditions Culture and growth conditions

[Ref.: #9348]

Culture medium

GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)

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Culture medium growth

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Culture medium link

Medium recipe at MediaDive

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Culture medium composition

expand / minimize

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Culture medium

ISP 2

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Culture medium growth

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Culture medium composition

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Culture medium

ISP 3

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Culture medium growth

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Culture medium composition

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Culture medium

ISP 4

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Culture medium growth

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Culture medium composition

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Culture medium

ISP 5

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Culture medium growth

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Culture medium composition

expand / minimize

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Culture medium

ISP 6

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Culture medium growth

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Culture medium composition

expand / minimize

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Culture medium

ISP 7

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Culture medium growth

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Culture medium composition

expand / minimize

		Temperature
[Ref.: #9348]	growth	20 °C
[Ref.: #19410]	optimum	28 °C
[Ref.: #67770]	growth	28 °C

Information on physiology and metabolism Physiology and metabolism

[Ref.: #69480]

Oxygen tolerance

aerobe Confidence in %93.756

[Ref.: #69480]

Ability of spore formation

yes Confidence in %91.659

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #68368]	arginine ChEBI	+	hydrolysis	* from API 20E
[Ref.: #68368]	citrate ChEBI	+	assimilation	* from API 20E
[Ref.: #68368]	gelatin ChEBI	+	hydrolysis	* from API 20E
[Ref.: #68368]	lysine ChEBI	-	degradation	* from API 20E
[Ref.: #68368]	ornithine ChEBI	-	degradation	* from API 20E
[Ref.: #68368]	tryptophan ChEBI	+	energy source	* from API 20E
[Ref.: #68368]	urea ChEBI	+	hydrolysis	* from API 20E

	Metabolite	Production
[Ref.: #68368]	acetoin ChEBI	yes	* from API 20E
[Ref.: #68368]	hydrogen sulfide ChEBI	no	* from API 20E
[Ref.: #68368]	indole ChEBI	yes	* from API 20E

	Physiological tests	Metabolite	Voges-Proskauer-test	Indole test
[Ref.: #68368]		acetoin ChEBI	+		* from API 20E
[Ref.: #68368]		indole ChEBI		+	* from API 20E

	Enzyme	Enzyme activity	EC number
[Ref.: #68382]	acid phosphatase	+	3.1.3.2	* from API zym
[Ref.: #68382]	alkaline phosphatase	+	3.1.3.1	* from API zym
[Ref.: #68382]	alpha-chymotrypsin	+	3.4.21.1	* from API zym
[Ref.: #68382]	alpha-fucosidase	-	3.2.1.51	* from API zym
[Ref.: #68382]	alpha-galactosidase	-	3.2.1.22	* from API zym
[Ref.: #68382]	alpha-glucosidase	+	3.2.1.20	* from API zym
[Ref.: #68382]	alpha-mannosidase	+	3.2.1.24	* from API zym
[Ref.: #68368]	arginine dihydrolase	+	3.5.3.6	* from API 20E
[Ref.: #68368]	beta-galactosidase	+	3.2.1.23	* from API 20E, API zym
[Ref.: #68382]	beta-glucosidase	+	3.2.1.21	* from API zym
[Ref.: #68382]	beta-glucuronidase	-	3.2.1.31	* from API zym
[Ref.: #68382]	cystine arylamidase	+	3.4.11.3	* from API zym
[Ref.: #68382]	esterase (C 4)	+		* from API zym
[Ref.: #68382]	esterase lipase (C 8)	+		* from API zym
[Ref.: #68368]	gelatinase	+		* from API 20E
[Ref.: #68382]	leucine arylamidase	+	3.4.11.1	* from API zym
[Ref.: #68382]	lipase (C 14)	+		* from API zym
[Ref.: #68368]	lysine decarboxylase	-	4.1.1.18	* from API 20E
[Ref.: #68382]	N-acetyl-beta-glucosaminidase	+	3.2.1.52	* from API zym
[Ref.: #68382]	naphthol-AS-BI-phosphohydrolase	+		* from API zym
[Ref.: #68368]	ornithine decarboxylase	-	4.1.1.17	* from API 20E
[Ref.: #68382]	trypsin	+	3.4.21.4	* from API zym
[Ref.: #68368]	tryptophan deaminase	-	4.1.99.1	* from API 20E
[Ref.: #68368]	urease	+	3.5.1.5	* from API 20E
[Ref.: #68382]	valine arylamidase	+		* from API zym
	Only first 10 entries are displayed. Click here to see all.

API® 20E:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	beta-GalactosidaseONPG	Arginine dihydrolaseADH (Arg)	Lysine decarboxylaseLDC (Lys)	Ornithine decarboxylaseODC	Citrate utilizationCIT	H2S productionH2S	Urease/urea hydrolysisURE	Tryptophan deaminaseTDA (Trp)	Indole productionIND	Acetoin production (Voges Proskauer test)VP	Gelatinase/gelatin hydrolysisGEL	Fermentation/oxidation of D-glucoseGLU	Fermentation/oxidation of D-mannitolMAN	Fermentation/oxidation of inositolINO	Fermentation/oxidation of sorbitolSor	Fermentation/oxidation of L-rhamnoseRHA	Fermentation/oxidation of sucroseSAC	Fermentation/oxidation of melibioseMEL	Fermentation/oxidation of amygdalinAMY	Fermentation/oxidation of L-arabinoseARA	Cytochrome oxidaseOX	Nitrite productionNO2	Reduction to N2N2	MotilityMOB	Growth on MacConkey mediumMAC	Oxidative catabolisation of D-glucoseOF-O	Fermentation of D-glucoseOF-F
[Ref.: #19410]	275	+	+	-	-	+	-	+	-	+	+	+	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.

API® zym:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Control	2-naphthyl phosphateAlkaline phosphatase	2-naphthyl butyrateEsterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	2-naphthyl myristateLipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	N-benzoyl-DL-arginine-2-naphthylamideTrypsin	N-glutaryl-phenylalanine-2-naphthylamidealpha- Chymotrypsin	2-naphthyl phosphateAcid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	6-Br-2-naphthyl-alphaD-galactpyranosidealpha- Galactosidase	2-naphthyl-betaD-galactpyranosidebeta- Galactosidase	Naphthol-AS-BI-betaD-glucuronidebeta- Glucuronidase	2-naphthyl-alphaD-glucopyranosidealpha- Glucosidase	6-Br-2-naphthyl-betaD-glucopyranosidebeta- Glucosidase	1-naphthyl-N-acetyl-betaD-glucosaminideN-acetyl-beta- glucosaminidase	6-Br-2-naphthyl-alphaD-mannopyranosidealpha- Mannosidase	2-naphthyl-alphaL-fucopyranosidealpha- Fucosidase
[Ref.: #19410]	348	not determinedn.d.	+	+	+	+	+	+	+	+	+	+	+	-	+	-	+	+	+	+	-

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #9348]	Sample type/isolated from	soil
[Ref.: #9348]	Geographic location (country and/or sea, region)	Daghestan
[Ref.: #9348]	Country	Russia
[Ref.: #9348]	Country ISO 3 Code	RUS
[Ref.: #9348]	Continent	Europe
* marker position based on {}

Isolation sources categories

#Environmental

#Terrestrial

#Soil

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence AY999770 (>99% sequence identity) for Streptomyces from Microbeatlas

Aquatic Samples	286
Soil Samples	2441
Animal Samples	1009
Plant Samples	294
Total Samples	4030

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #9348]	Biosafety level	1	Risk group (German classification) According to TRBA 466
[Ref.: #19410]	Biosafety level	1	Risk group (German classification)

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Streptomyces cyaneofuscatus strain JCM 4364 16S ribosomal RNA gene, partial sequence	AY999770	1430	GenBank ENA	66883 tax ID
[Ref.: #9348]	Streptomyces cyaneofuscatus gene for 16S rRNA, partial sequence, strain: NBRC 13190	AB184860	1436	GenBank ENA	66883 tax ID
[Ref.: #124043]	Streptomyces cyaneofuscatus gene for 16S ribosomal RNA, partial sequence, strain: JCM 4364.	D44081	120	GenBank ENA	66883 tax ID	*

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Streptomyces cyaneofuscatus NRRL B-2570	GCA_000718135	contig	GenBank ENA	66883 tax ID

[Ref.: #67770]	GC-content	71.6 mol%	genome sequence analysis
[Ref.: #67770]	GC-content	71 mol%	fluorimetric

Data predicted using genome information as a basis Genome-based predictions

	Trait	Model	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Streptomyces cyaneofuscatus NRRL B-2570 NCBI: GCA_000718135.1
[Ref.: #69480]	gram-positive	gram-positiveⓘ	yes	93.278	no
[Ref.: #69480]	anaerobic	anaerobicⓘ	no	97.932	no
[Ref.: #69480]	aerobic	aerobicⓘ	yes	93.756	no
[Ref.: #69480]	spore-forming	spore-formingⓘ	yes	91.659	no
[Ref.: #69480]	thermophilic	thermophileⓘ	no	95.478	no
[Ref.: #69480]	flagellated	motile2+ⓘ	no	87.5	no

Availability in culture collections External links

[Ref.: #9348]

Culture collection no.

DSM 40148, ATCC 19746, ATCC 23619, CBS 485.68, ETH 24190, IFO 13190, INA 99/54, ISP 5148, NBRC 13190, RIA 1027, JCM 4364, BCRC 11467, CGMCC 4.1612, IMET 41583, KCCM 40517, NCIMB 13021, NRRL B-2570, VKM Ac-752, VTT E-072752

[Ref.: #84221]

SI-ID 38130

Literature:

Topic	Title	Authors	Journal	DOI	Year
Biotechnology	Production of Potent Antimicrobial Compounds from Streptomyces cyaneofuscatus Associated with Fresh Water Sediment.	Zothanpuia, Passari AK, Chandra P, Leo VV, Mishra VK, Kumar B, Singh BP	Front Microbiol	10.3389/fmicb.2017.00068	2017	*
Metabolism	Optimization of antifungal production by an alkaliphilic and halotolerant actinomycete, Streptomyces sp. SY-BS5, using response surface methodology.	Souagui Y, Tritsch D, Grosdemange-Billiard C, Kecha M	J Mycol Med	10.1016/j.mycmed.2014.12.004	2015	*
Phylogeny	Biocontrol of Rhizoctonia solani damping-off and promotion of tomato plant growth by endophytic actinomycetes isolated from native plants of Algerian Sahara.	Goudjal Y, Toumatia O, Yekkour A, Sabaou N, Mathieu F, Zitouni A	Microbiol Res	10.1016/j.micres.2013.06.014	2013	*

References

#9348

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 40148

#19410

Wink, J.: Compendium of Actinobacteria. HZI-Helmholtz-Centre for Infection Research, Braunschweig .

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#68368

Automatically annotated from API 20E .

#68382

Automatically annotated from API zym .

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#84221

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID38130.1 )

#124043

Dr. Isabel Schober, Dr. Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy .

* These data were automatically processed and therefore are not curated

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Streptomyces cyaneofuscatus NRRL B-2570

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