Streptomyces cremeus DSM 40147 is a bacterium that produces antibiotic compounds and was isolated from soil.
antibiotic compound production genome sequence 16S sequence Bacteria
SI-ID 37147
| @ref 20215 |
|
Last LPSN update
2026-02-09 11:21:36 |
| Domain Bacteria |
| Phylum Actinomycetota |
| Class Actinomycetes |
| Order Kitasatosporales |
| Family Streptomycetaceae |
| Genus Streptomyces |
| Species Streptomyces cremeus |
| Full scientific name Streptomyces cremeus (Kudrina 1957) Pridham et al. 1958 (Approved Lists 1980) |
| Synonyms (1) |
| @ref | Name | Growth | Medium link | Composition | |
|---|---|---|---|---|---|
| 9347 | GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) | Medium recipe at MediaDive  | Name: GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) Composition: Agar 18.0 g/l Malt extract 10.0 g/l Yeast extract 4.0 g/l Glucose 4.0 g/l CaCO3 2.0 g/l Distilled water |
| @ref | Chebi-ID | Metabolite | Utilization activity | Kind of utilization tested | |
|---|---|---|---|---|---|
| 18546 | 22599 ChEBI | arabinose | + | ||
| 68368 | 29016 ChEBI | arginine | - | hydrolysis | from API 20E |
| 18546 | 62968 ChEBI | cellulose | + | ||
| 68368 | 16947 ChEBI | citrate | + | assimilation | from API 20E |
| 18546 | 28757 ChEBI | fructose | - | ||
| 68368 | 5291 ChEBI | gelatin | + | hydrolysis | from API 20E |
| 18546 | 17234 ChEBI | glucose | + | ||
| 68368 | 25094 ChEBI | lysine | - | degradation | from API 20E |
| 18546 | 29864 ChEBI | mannitol | - | ||
| 18546 | 17268 ChEBI | myo-inositol | - | ||
| 68368 | 18257 ChEBI | ornithine | - | degradation | from API 20E |
| 18546 | 16634 ChEBI | raffinose | - | ||
| 18546 | 26546 ChEBI | rhamnose | - | ||
| 18546 | 17992 ChEBI | sucrose | - | ||
| 68368 | 27897 ChEBI | tryptophan | - | energy source | from API 20E |
| 68368 | 16199 ChEBI | urea | + | hydrolysis | from API 20E |
| 18546 | 18222 ChEBI | xylose | - |
| @ref | Value | Activity | Ec | |
|---|---|---|---|---|
| 68382 | acid phosphatase | + | 3.1.3.2 | from API zym |
| 68382 | alkaline phosphatase | + | 3.1.3.1 | from API zym |
| 68382 | alpha-chymotrypsin | + | 3.4.21.1 | from API zym |
| 68382 | alpha-fucosidase | - | 3.2.1.51 | from API zym |
| 68382 | alpha-galactosidase | - | 3.2.1.22 | from API zym |
| 68382 | alpha-glucosidase | + | 3.2.1.20 | from API zym |
| 68382 | alpha-mannosidase | + | 3.2.1.24 | from API zym |
| 68368 | arginine dihydrolase | - | 3.5.3.6 | from API 20E |
| 68382 | beta-galactosidase | + | 3.2.1.23 | from API zym |
| 68368 | beta-galactosidase | - | 3.2.1.23 | from API 20E |
| 68382 | beta-glucosidase | + | 3.2.1.21 | from API zym |
| 68382 | beta-glucuronidase | - | 3.2.1.31 | from API zym |
| 68382 | cystine arylamidase | + | 3.4.11.3 | from API zym |
| 68382 | esterase (C 4) | + | from API zym | |
| 68382 | esterase lipase (C 8) | + | from API zym | |
| 68368 | gelatinase | + | from API 20E | |
| 68382 | leucine arylamidase | + | 3.4.11.1 | from API zym |
| 68382 | lipase (C 14) | - | from API zym | |
| 68368 | lysine decarboxylase | - | 4.1.1.18 | from API 20E |
| 68382 | N-acetyl-beta-glucosaminidase | + | 3.2.1.52 | from API zym |
| 68382 | naphthol-AS-BI-phosphohydrolase | + | from API zym | |
| 68368 | ornithine decarboxylase | - | 4.1.1.17 | from API 20E |
| 68382 | trypsin | + | 3.4.21.4 | from API zym |
| 68368 | tryptophan deaminase | - | 4.1.99.1 | from API 20E |
| 68368 | urease | + | 3.5.1.5 | from API 20E |
| 68382 | valine arylamidase | + | from API zym |
Global distribution of 16S sequence AB184124 (>99% sequence identity) for Streptomyces from Microbeatlas 
 Aquatic Samples |
1 |
 Soil Samples |
103 |
 Animal Samples |
6 |
 Plant Samples |
2 |
| Total Samples | 112 |
| @ref | Description | Assembly level | INSDC accession | NCBI tax ID | Score | |
|---|---|---|---|---|---|---|
| 124043 | ASM3953543v1 assembly for Streptomyces cremeus JCM 4362 | contig | GCA_039535435   | 66881 | 72.62 | |
| 124043 | ASM4243090v1 assembly for Streptomyces cremeus JCM 4362 | scaffold | GCA_042430905 | 66881 | 70.98 | |
| @ref | Description | Accession | Length | Database | NCBI tax ID | |
|---|---|---|---|---|---|---|
| 20218 | Streptomyces cremeus strain JCM 4362 16S ribosomal RNA gene, partial sequence | AY999744 | 1429 |  | 66881 | |
| 20218 | Streptomyces cremeus gene for 16S ribosomal RNA, partial sequence, strain: JCM 4362 | D44079 | 120 | | 66881 | |
| 20218 | Streptomyces cremeus gene for 16S rRNA, partial sequence, strain: NBRC 12760 | AB184124 | 1464 | | 66881 | |
| 124043 | Streptomyces cremeus strain JCM 4362 16S ribosomal RNA gene, partial sequence. | MT760520 | 1307 | | 66881 | |
| Topic | Title | Authors | Journal | DOI | Year | |
|---|---|---|---|---|---|---|
| Role of a FAD-dependent monooxygenase in diazo group functionalization of kinamycin in Streptomyces ambofaciens. | Vicente CM, Boutilliat A, Hotel L, Paris C, Aigle B. | Microbiology (Reading) | 10.1099/mic.0.001576 | 2025 | | |
| Two New Phenylhydrazone Derivatives from the Pearl River Estuary Sediment-Derived Streptomyces sp. SCSIO 40020. | Liu W, Ma L, Zhang L, Chen Y, Zhang Q, Zhang H, Zhang W, Zhang C, Zhang W. | Mar Drugs | 10.3390/md20070449 | 2022 | | |
| Enzymology | The Cremeomycin Biosynthetic Gene Cluster Encodes a Pathway for Diazo Formation. | Waldman AJ, Pechersky Y, Wang P, Wang JX, Balskus EP. | Chembiochem | 10.1002/cbic.201500407 | 2015 | |
| Mechanistic and structural insights into the itaconate-producing trans-aconitate decarboxylase Tad1. | Zheng L, Li W, Christ M, Paczia N, Buckel W, Mais CN, Bolker M, Freitag J, Bange G. | PNAS Nexus | 10.1093/pnasnexus/pgaf059 | 2025 | | |
| Metabolism | A nitrous acid biosynthetic pathway for diazo group formation in bacteria. | Sugai Y, Katsuyama Y, Ohnishi Y. | Nat Chem Biol | 10.1038/nchembio.1991 | 2016 | |
| Genetics | Leveraging Microbial Genomes and Genomic Context for Chemical Discovery. | Kountz DJ, Balskus EP. | Acc Chem Res | 10.1021/acs.accounts.1c00100 | 2021 | |
| Variation in Bat Guano Bacterial Community Composition With Depth. | Newman MM, Kloepper LN, Duncan M, McInroy JA, Kloepper JW. | Front Microbiol | 10.3389/fmicb.2018.00914 | 2018 | | |
| Enzymology | [L-Glutamate oxidase from Streptomyces cremeus 510 MGU: effect of nitrogen sources on enzyme secretion]. | Vinogradova KA, Vlasova II, Sharkova TS, Dodzin ME, Maksimov VN. | Antibiot Khimioter | 2003 | | |
| Metabolism | [L-Glutamate oxidase from Streptomyces cremeus 510 MGU: growth media optimization for the enhancement of the producer fermentative activity]. | Vinogradova KA, Vlasova II, Sharkova TS. | Antibiot Khimioter | 2002 | | |
| Enzymology | [Novel L-glutamate oxidase producing organisms: Streptomyces litmocidini and Streptomyces cremeus]. | Dodzin ME, Vinogradova KA, Kotova IB. | Antibiot Khimioter | 1998 | | |
| Metabolism | Recycling of Overactivated Acyls by a Type II Thioesterase during Calcimycin Biosynthesis in Streptomyces chartreusis NRRL 3882. | Wu H, Liang J, Gou L, Wu Q, Liang WJ, Zhou X, Bruce IJ, Deng Z, Wang Z. | Appl Environ Microbiol | 10.1128/aem.00587-18 | 2018 | |
| Metabolism | Cezomycin Is Activated by CalC to Its Ester Form for Further Biosynthesis Steps in the Production of Calcimycin in Streptomyces chartreusis NRRL 3882. | Wu H, Liang J, Wang J, Liang WJ, Gou L, Wu Q, Zhou X, Bruce IJ, Deng Z, Wang Z. | Appl Environ Microbiol | 10.1128/aem.00586-18 | 2018 | |
| Metabolism | [Obtaining mutants that yield tobramycin in a culture of the producer of a complex of aminoglycoside antibiotics, Streptomyces cremeus var. tobramycini var. nov. 2242]. | Siniagina OP, Lapchinskaia OA, Lavrova-Balashova MF, Nesterova TP, Ponomarenko VI. | Antibiotiki | 1980 | | |
| Metabolism | PS-5, a new beta-lactam antibiotic. I. Taxonomy of the producing organism, isolation and physico-chemical properties. | Okamura K, Hirata S, Koki A, Hori K, Shibamoto N, Okumura Y, Okabe M, Okamoto R, Kouno K, Fukagawa Y, Shimauchi Y, Ishikura T, Lein J. | J Antibiot (Tokyo) | 10.7164/antibiotics.32.262 | 1979 | |
| Metabolism | [Synthetic medium for the biosynthesis of tobramycin]. | Motkova MO. | Antibiotiki | 1978 | | |
| Enzymology | A roadmap for metagenomic enzyme discovery. | Robinson SL, Piel J, Sunagawa S. | Nat Prod Rep | 10.1039/d1np00006c | 2021 | |
| Phylogeny | Streptomyces fukangensis sp. nov., a novel alkaliphilic actinomycete isolated from a saline-alkaline soil. | Zhang YG, Wang HF, Liu Q, Hozzein WN, Wadaan MA, Cheng J, Chen YJ, Zhang YM, Li WJ | Antonie Van Leeuwenhoek | 10.1007/s10482-013-0045-8 | 2013 | |
How to citeIf you want to cite this particular strain cite the following doi:
https://doi.org/10.13145/bacdive15113.20251217.10
When using BacDive for research please cite the following paper
BacDive in 2025: the core database for prokaryotic strain data
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