Name: Streptomyces fructofermentans Tü 2
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 15093

Type strain:

Species: Streptomyces fructofermentans

Strain Designation: Tü 2

Culture col. no.: DSM 40692, JCM 4956, NRRL 2588, ETH 6143, CGMCC 4.1593, IFO 15396, KCTC 9707, NBRC 15396

Strain history: KCC S-0956 <-- DSM 40692 <-- H. Zähner Tü 2 <-- ETH 6143.

NCBI tax ID(s): 67260 (species)

SI-ID 49741

DSM 40692, JCM 4956, NRRL 2588, IFO 15396, KCTC 9707, AS 4.1593, NBRC 15396, CGMCC 4.1593

Section

Streptomyces fructofermentans Tü 2 is a spore-forming, mesophilic bacterium that was isolated from soil.

spore-forming
mesophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Actinomycetota*
	Class	*Actinomycetes*
	Order	*Kitasatosporales*
	Family	*Streptomycetaceae*
	Genus	*Streptomyces*
	Species	**Streptomyces fructofermentans**
	Full Scientific Name (LPSN)	Streptomyces fructofermentans (Corbaz et al. 1957) Komaki and Tamura 2021

Synonym

Streptomyces cinereoruber subsp. fructofermentans

Information on morphological and physiological properties Morphology

[Ref.: #69480]	Gram stain	positive Confidence in %100

[Ref.: #69480]	Motility	no Confidence in %91.89

Information on culture and growth conditions Culture and growth conditions

[Ref.: #9697]

Culture medium

GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)

[Ref.: #9697]

Culture medium growth

[Ref.: #9697]

Culture medium link

Medium recipe at MediaDive

[Ref.: #9697]

Culture medium composition

expand / minimize

[Ref.: #9697]

Culture medium

ROLLED OATS MINERAL MEDIUM (DSMZ Medium 84)

[Ref.: #9697]

Culture medium growth

[Ref.: #9697]

Culture medium link

Medium recipe provided by DSMZ

	Temperatures	Kind of temperature		Temperature
[Ref.: #9697]			growth	28 °C
[Ref.: #67770]			growth	28 °C

[Ref.: #9697]	Temperature range	mesophilic
[Ref.: #67770]	Temperature range	mesophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #69481]	Ability of spore formation	yes Confidence in %100
[Ref.: #69480]	Ability of spore formation	yes Confidence in %100

[Ref.: #9697]

Name of produced compound

cinerubin

	Metabolite production	Metabolite	Production
[Ref.: #67770]		cinerubin R	yes

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #9697]	Sample type/isolated from	soil
[Ref.: #9697]	Geographic location (country and/or sea, region)	Zürich
[Ref.: #9697]	Country	Switzerland
[Ref.: #9697]	Country ISO 3 Code	CHE
[Ref.: #9697]	Continent	Europe

[Ref.: #67770]	Sample type/isolated from	Soil
[Ref.: #67770]	Geographic location (country and/or sea, region)	Zürcher Zoo
[Ref.: #67770]	Country	Switzerland
[Ref.: #67770]	Country ISO 3 Code	CHE
[Ref.: #67770]	Continent	Europe
* marker position based on {}

Isolation sources categories

#Environmental

#Terrestrial

#Soil

What are isolation sources categories?

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #9697]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #20218]	Streptomyces cinereoruber subsp. fructofermentans strain JCM 4956 16S ribosomal RNA gene, partial sequence	AY999758	1432	ENA	152141 tax ID	*
[Ref.: #20218]	Streptomyces cinereoruber subsp. fructofermentans gene for 16S rRNA, partial sequence, strain: NBRC 15396	AB184647	1475	ENA	152141 tax ID	*

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Streptomyces cinereoruber subsp. fructofermentans strain JCM 4956	152141.3	wgs	PATRIC	152141 tax ID	*
[Ref.: #66792]	Streptomyces fructofermentans JCM 4956	GCA_014651055	scaffold	GenBank	152141 tax ID	*

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from GenomeNet Sporulation v. 1 based on: Streptomyces cinereoruber subsp. fructofermentans strain JCM 4956 PATRIC: 152141.3
[Ref.: #69481]	spore-forming	yes	100	no

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Streptomyces cinereoruber subsp. fructofermentans strain JCM 4956 PATRIC: 152141.3
[Ref.: #69480]	motile	no	95.329	no
[Ref.: #69480]	gram-positive	yes	90.796	no
[Ref.: #69480]	anaerobic	no	99.347	no
[Ref.: #69480]	aerobic	yes	94.201	no
[Ref.: #69480]	halophile	no	91.888	no
[Ref.: #69480]	spore-forming	yes	95.17	no
[Ref.: #69480]	glucose-util	yes	89.531	no
[Ref.: #69480]	flagellated	no	97.993	no
[Ref.: #69480]	thermophile	no	98.865	yes
[Ref.: #69480]	glucose-ferment	no	87.559	no

Availability in culture collections External links

[Ref.: #9697]

Culture collection no.

DSM 40692, JCM 4956, NRRL 2588, ETH 6143, CGMCC 4.1593, IFO 15396, KCTC 9707, NBRC 15396

[Ref.: #84199]

SI-ID 49741

References

#9697

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 40692

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69481

Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch: Predictions based on the model GenomeNet Sporulation v. 1 . ( DOI 10.21203/rs.3.rs-2527258/v1 )

#84199

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID49741.1 )

* These data were automatically processed and therefore are not curated

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Streptomyces cinereoruber subsp. fructofermentans strain JCM 4956

Streptomyces cinereoruber subsp. fructofermentans strain JCM 4956

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