Streptomyces cavourensis subsp. cavourensis 829 is a bacterium that produces antibiotic compounds and was isolated from soil.
antibiotic compound production genome sequence 16S sequence Bacteria| @ref 20215 |
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| Domain Bacteria |
| Phylum Actinomycetota |
| Class Actinomycetes |
| Order Kitasatosporales |
| Family Streptomycetaceae |
| Genus Streptomyces |
| Species Streptomyces cavourensis subsp. cavourensis |
| Full scientific name Streptomyces cavourensis subsp. cavourensis Skarbek and Brady 1978 (Approved Lists 1980) |
| BacDive ID | Other strains from Streptomyces cavourensis subsp. cavourensis (4) | Type strain |
|---|---|---|
| 169313 | S. cavourensis subsp. cavourensis S1, DSM 112466 | |
| 174684 | S. cavourensis subsp. cavourensis Z 5703, DSM 40892 | |
| 176615 | S. cavourensis subsp. cavourensis DSM 40873 | |
| 176616 | S. cavourensis subsp. cavourensis DSM 40874 |
| @ref | Name | Growth | Medium link | Composition | |
|---|---|---|---|---|---|
| 9442 | GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) | Medium recipe at MediaDive | Name: GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) Composition: Agar 18.0 g/l Malt extract 10.0 g/l Yeast extract 4.0 g/l Glucose 4.0 g/l CaCO3 2.0 g/l Distilled water | ||
| 9442 | STARCH - MINERAL SALT - AGAR (STMS) (DSMZ Medium 252) | Medium recipe at MediaDive | Name: STARCH - MINERAL SALT - AGAR (STMS) (DSMZ Medium 252) Composition: Agar 20.0 g/l Starch 10.0 g/l (NH4)2SO4 2.0 g/l CaCO3 2.0 g/l K2HPO4 1.0 g/l MgSO4 x 7 H2O 1.0 g/l NaCl 1.0 g/l FeSO4 x 7 H2O 0.001 g/l MnCl2 x 4 H2O 0.001 g/l ZnSO4 x 7 H2O 0.001 g/l Distilled water |
| @ref | Sample type | Country | Country ISO 3 Code | Continent | |
|---|---|---|---|---|---|
| 9442 | soil | Italy | ITA | Europe |
Global distribution of 16S sequence AB184264 (>99% sequence identity) for Streptomyces from Microbeatlas ![]()
| @ref | Description | Assembly level | INSDC accession | BV-BRC accession | IMG accession | NCBI tax ID | Score | |
|---|---|---|---|---|---|---|---|---|
| 66792 | ASM678893v1 assembly for Streptomyces cavourensis DSM 41795 | contig | 67258 | 78.99 | ||||
| 66792 | ASM1464921v1 assembly for Streptomyces cavourensis JCM 4298 | scaffold | 67258 | 63.6 |
| @ref | Description | Accession | Length | Database | NCBI tax ID | |
|---|---|---|---|---|---|---|
| 20218 | Streptomyces cavourensis subsp. cavourensis gene for 16S ribosomal RNA, partial sequence, strain: JCM 4555 | D44228 | 120 | 67259 | ||
| 20218 | Streptomyces cavourensis subsp. cavourensis gene for 16S rRNA, partial sequence, strain: NBRC 13026 | AB184264 | 1479 | 67259 | ||
| 20218 | Streptomyces cavourensis subsp. cavourensis strain NRRL 2740 16S ribosomal RNA gene, partial sequence | DQ445791 | 1501 | 67259 | ||
| 124043 | Streptomyces cavourensis strain JCM 4298 16S ribosomal RNA gene, partial sequence. | MT760505 | 1396 | 67258 |
| @ref | GC-content (mol%) | Method | |
|---|---|---|---|
| 67770 | 72 | fluorimetric |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125439 | oxygen_tolerance | BacteriaNetⓘ | obligate aerobe | 98.09 | no |
| 125439 | gram_stain | BacteriaNetⓘ | positive | 94.24 | no |
| 125439 | spore_formation | BacteriaNetⓘ | yes | 94.01 | no |
| 125439 | motility | BacteriaNetⓘ | no | 93.04 | no |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125438 | gram-positive | gram-positiveⓘ | yes | 89.99 | no |
| 125438 | anaerobic | anaerobicⓘ | no | 96.93 | no |
| 125438 | aerobic | aerobicⓘ | yes | 91.08 | no |
| 125438 | spore-forming | spore-formingⓘ | yes | 91.74 | no |
| 125438 | thermophilic | thermophileⓘ | no | 94.50 | yes |
| 125438 | flagellated | motile2+ⓘ | no | 89.50 | no |
| Topic | Title | Authors | Journal | DOI | Year | |
|---|---|---|---|---|---|---|
| Genetics | Genomic Insights and Antimicrobial Potential of Newly Streptomyces cavourensis Isolated from a Ramsar Wetland Ecosystem. | Benhadj M, Menasria T, Zaatout N, Ranque S. | Microorganisms | 10.3390/microorganisms13030576 | 2025 | |
| Genome Sequence of Streptomyces cavourensis BUU135, Isolated from Soil from a Tropical Fruit Farm in Thailand. | Tangwattanachuleeporn M, Ruangsuj P, Yamprayoonswat W, Sittihan S, Jumpathong W, Yasawong M. | Microbiol Resour Announc | 10.1128/mra.01428-20 | 2021 | ||
| Phylogenetic and Physiological Diversity of Cultivable Actinomycetes Isolated From Alpine Habitats on the Qinghai-Tibetan Plateau. | Ma A, Zhang X, Jiang K, Zhao C, Liu J, Wu M, Wang Y, Wang M, Li J, Xu S. | Front Microbiol | 10.3389/fmicb.2020.555351 | 2020 | ||
| Genetics | Dataset of the complete genome of Streptomyces cavourensis strain 2BA6PGT isolated from sediment from the bottom of the salt lake Verkhnee Beloe (Buryatia, Russia). | Chong ETJ, Chiang C, Png KK, Abidueva E, Zaitseva S, Sun C, Lee PC. | Data Brief | 10.1016/j.dib.2022.108877 | 2023 | |
| Phylogeny | Taxonomic Characterizations of Soil Streptomyces cavourensis DW102 and Its Activity against Fungal Pathogens. | Sheik GB, Alhumaidy AA, Abdel Raheim AIA, Alzeyadi ZA, AlGhonaim MI. | J Pharm Bioallied Sci | 10.4103/jpbs.jpbs_304_20 | 2020 | |
| Three-membered ring formation catalyzed by alpha-ketoglutarate-dependent nonheme iron enzymes. | Ushimaru R. | J Nat Med | 10.1007/s11418-023-01760-4 | 2024 | ||
| Discovery of a Novel Chromone Enantiomer and the Precursors of Nonactic Acid from the Coral-Reef-Derived Streptomyces sp. SCSIO 66814. | Ding W, Li Y, Li X, Yin J, Shi S, Tian X, Zhang S, Yin H. | Mar Drugs | 10.3390/md22040181 | 2024 | ||
| New CYP154C4 from Streptomyces cavourensis YBQ59 performs regio- and stereo- selective 3beta-hydroxlation of nootkatone. | Ly TTB, Thi Mai TT, Raffaele A, Urlacher VB, Nguyen TT, Hutter MC, Thi Vu HN, Thuy Le DT, Quach TN, Phi QT. | Arch Biochem Biophys | 10.1016/j.abb.2024.110192 | 2024 | ||
| A Streptomyces Agent for Biocontrol of Phytophthora Blight and Its Modulation of Rhizosphere Microbiomes in Passion Fruit. | Chen YH, Sung KY, Tuan SJ, Huang JW, Lin YH, Huang TP. | Plant Dis | 10.1094/pdis-01-25-0089-re | 2025 | ||
| Cavomycins A-C, Linear Oligomer Depsipeptides from an Annelid-Associated Streptomyces cavourensis. | Wang W, Lee J, Roh E, Shetye G, Cao J, McAlpine J, Pauli G, Franzblau S, Vu THN, Quach NT, Oh E, Park KH, Park C, Cho Y, Jang H, Han S, Kim H, Cho S, Phi QT, Kang H. | J Nat Prod | 10.1021/acs.jnatprod.3c01275 | 2024 | ||
| Suppression of Macrophomina root rot, Fusarium wilt and growth promotion of some pulses by antagonistic rhizobacteria | Manikandan A, Jaivel N, Johnson I, Krishnamoorthy R, Senthilkumar M, Raghu R, Gopal NO, Mukherjee PK, Anandham R. | Physiol Mol Plant Pathol | 10.1016/j.pmpp.2022.101876 | 2022 | ||
| Genomic and physiological traits provide insights into ecological niche adaptations of mangrove endophytic Streptomyces parvulus VCCM 22513 | Quach NT, Vu THN, Bui TL, Le TTX, Nguyen TTA, Ngo CC, Phi QT. | Ann Microbiol | 2022 | |||
| Gamma-induced mutants of Bacillus and Streptomyces display enhanced antagonistic activities and suppression of the root rot and wilt diseases in pulses. | Manikandan A, Johnson I, Jaivel N, Krishnamoorthy R, SenthilKumar M, Raghu R, Gopal NO, Mukherjee PK, Anandham R. | Biomol Concepts | 10.1515/bmc-2022-0004 | 2022 | ||
| Metabolism | Molecular profiling of endophytic Streptomyces cavourensis MH16 inhabiting Millingtonia hortensis Linn. and influence of different culture media on biosynthesis of antimicrobial metabolites. | Mondal S, Rai VR. | Naturwissenschaften | 10.1007/s00114-019-1646-5 | 2019 | |
| Deciphering the antagonistic effect of Streptomyces spp. and host-plant resistance induction against charcoal rot of sorghum. | Gopalakrishnan S, Srinivas V, Naresh N, Pratyusha S, Ankati S, Madhuprakash J, Govindaraj M, Sharma R. | Planta | 10.1007/s00425-021-03577-5 | 2021 | ||
| Three New Depsipeptides, Homiamides A-C, Isolated from Streptomyces sp., ROA-065. | Kim JH, Lee JY, Lee J, Hillman PF, Lee J, Choi B, Paik MJ, Lee S, Nam SJ. | Molecules | 10.3390/molecules29235539 | 2024 | ||
| Metabolism | Aerobic degradation of BTEX compounds by Streptomyces species isolated from activated sludge and agricultural soils. | Hocinat A, Boudemagh A, Ali-Khodja H, Medjemadj M. | Arch Microbiol | 10.1007/s00203-020-01970-4 | 2020 | |
| Genome Sequence of Streptomyces cavourensis 1AS2a, a Rhizobacterium Isolated from the Brazilian Cerrado Biome. | Vargas Hoyos HA, Santos SN, Padilla G, Melo IS. | Microbiol Resour Announc | 10.1128/mra.00065-19 | 2019 | ||
| Draft Genome Sequence of Streptomyces cavourensis YBQ59, an Endophytic Producer of Antibiotics Bafilomycin D, Nonactic Acid, Prelactone B, and 5,11-Epoxy-10-Cadinanol. | Nguyen HQ, Vu NT, Chu HH, Chu SK, Hoang H, Tran TT, Nguyen C, Dinh LT, Trinh HT, Phi TQ. | Microbiol Resour Announc | 10.1128/mra.01056-18 | 2018 | ||
| Cultivation | Efficient Plant Growth-Promoting (PGP) Native Actinomycetes-Formulated Consortia Mode and Assessed Shelf Life Using Low-Cost Dynamic Media. | Moorthy TS, Kannan R, Thiruvengadam R, Kadaikunnan S, Khaled JM, Venkidasamy B, Thiruvengadam M. | J Microbiol Biotechnol | 10.4014/jmb.2409.09040 | 2025 | |
| Pathogenicity | Diversity, antibacterial and phytotoxic activities of actinomycetes associated with Periplaneta fuliginosa. | Liu Q, Tao J, Kan L, Zhang Y, Zhang S. | PeerJ | 10.7717/peerj.18575 | 2024 | |
| Characterization and evaluation of actinomycete from the Protaetia brevitarsis Larva Frass. | Zhang L, Zhao T, Geng L, Zhang C, Xiang W, Zhang J, Wang X, Shu C. | Front Microbiol | 10.3389/fmicb.2024.1385734 | 2024 | ||
| Enzymology | Identification and characterization of the antifungal substances of a novel Streptomyces cavourensis NA4. | Pan HQ, Yu SY, Song CF, Wang N, Hua HM, Hu JC, Wang SJ. | J Microbiol Biotechnol | 10.4014/jmb.1407.07025 | 2015 | |
| Cladosporium psychrotolerans strain T01 enhances plant biomass and also exhibits antifungal activity against pathogens. | Gonzalez-Perez E, Jimenez-Bremont JF. | Braz J Microbiol | 10.1007/s42770-024-01399-7 | 2024 | ||
| Gamma radiation-induced enhancement of biocontrol agents for plant disease management. | Rostami M, Ghorbani A, Shahbazi S. | Curr Res Microb Sci | 10.1016/j.crmicr.2024.100308 | 2024 | ||
| Enzymology | Biotechnological Potential of Bacteria Isolated from the Sea Cucumber Holothuria leucospilota and Stichopus vastus from Lampung, Indonesia. | Wibowo JT, Kellermann MY, Versluis D, Putra MY, Murniasih T, Mohr KI, Wink J, Engelmann M, Praditya DF, Steinmann E, Schupp PJ. | Mar Drugs | 10.3390/md17110635 | 2019 | |
| Genetics | Genome-Guided Investigation Provides New Insights into Secondary Metabolites of Streptomyces parvulus SX6 from Aegiceras corniculatum. | Quach NT, Nguyen Vu TH, Bui TL, Pham AT, An Nguyen TT, Xuan Le TT, Thuy Ta TT, Dudhagara P, Phi QT. | Pol J Microbiol | 10.33073/pjm-2022-034 | 2022 | |
| Chimeric natural products derived from medermycin and the nature-inspired construction of their polycyclic skeletons. | Yin S, Liu Z, Shen J, Xia Y, Wang W, Gui P, Jia Q, Kachanuban K, Zhu W, Fu P. | Nat Commun | 10.1038/s41467-022-32901-0 | 2022 | ||
| Pathogenicity | Anti-Infective and Antiviral Activity of Valinomycin and Its Analogues from a Sea Cucumber-Associated Bacterium, Streptomyces sp. SV 21. | Wibowo JT, Kellermann MY, Kock M, Putra MY, Murniasih T, Mohr KI, Wink J, Praditya DF, Steinmann E, Schupp PJ. | Mar Drugs | 10.3390/md19020081 | 2021 | |
| Screening and Transcriptional Analysis of Polyketide Synthases and Non-ribosomal Peptide Synthetases in Bacterial Strains From Krubera-Voronja Cave. | Bukelskis D, Dabkeviciene D, Lukoseviciute L, Bucelis A, Kriauciunas I, Lebedeva J, Kuisiene N. | Front Microbiol | 10.3389/fmicb.2019.02149 | 2019 | ||
| Community Structures and Antifungal Activity of Root-Associated Endophytic Actinobacteria of Healthy and Diseased Soybean. | Liu C, Zhuang X, Yu Z, Wang Z, Wang Y, Guo X, Xiang W, Huang S. | Microorganisms | 10.3390/microorganisms7080243 | 2019 | ||
| Diversity and Bioactive Potential of Actinobacteria from Unexplored Regions of Western Ghats, India. | Siddharth S, Vittal RR, Wink J, Steinert M. | Microorganisms | 10.3390/microorganisms8020225 | 2020 | ||
| Biocontrol Potential of Endophytic Actinobacteria against Fusarium solani, the Causal Agent of Sudden Decline Syndrome on Date Palm in the UAE. | Alblooshi AA, Purayil GP, Saeed EE, Ramadan GA, Tariq S, Altaee AS, El-Tarabily KA, AbuQamar SF. | J Fungi (Basel) | 10.3390/jof8010008 | 2021 | ||
| The Screening of Potassium- and Phosphate-Solubilizing Actinobacteria and the Assessment of Their Ability to Promote Wheat Growth Parameters. | Boubekri K, Soumare A, Mardad I, Lyamlouli K, Hafidi M, Ouhdouch Y, Kouisni L. | Microorganisms | 10.3390/microorganisms9030470 | 2021 | ||
| Pseudomonas aeruginosa inhibits quorum-sensing mechanisms of soft rot pathogen Lelliottia amnigena RCE to regulate its virulence factors and biofilm formation. | Kapadia C, Kachhdia R, Singh S, Gandhi K, Poczai P, Alfarraj S, Ansari MJ, Gafur A, Sayyed RZ. | Front Microbiol | 10.3389/fmicb.2022.977669 | 2022 | ||
| Rare actinobacteria isolated from the hypersaline Ojo de Liebre Lagoon as a source of novel bioactive compounds with biotechnological potential. | Zamora-Quintero AY, Torres-Beltran M, Guillen Matus DG, Oroz-Parra I, Millan-Aguinaga N. | Microbiology (Reading) | 10.1099/mic.0.001144 | 2022 | ||
| Metabolism | Identification of cholesterol-assimilating actinomycetes strain and application of statistical modeling approaches for improvement of cholesterol oxidase production by Streptomyces anulatus strain NEAE-94. | El-Naggar NE, El-Shweihy NM. | BMC Microbiol | 10.1186/s12866-020-01775-x | 2020 | |
| Enzymology | Expression optimization, purification, and functional characterization of cholesterol oxidase from Chromobacterium sp. DS1. | Fazaeli A, Golestani A, Lakzaei M, Rasi Varaei SS, Aminian M. | PLoS One | 10.1371/journal.pone.0212217 | 2019 | |
| Biological Control of Mango Dieback Disease Caused by Lasiodiplodia theobromae Using Streptomycete and Non-streptomycete Actinobacteria in the United Arab Emirates. | Kamil FH, Saeed EE, El-Tarabily KA, AbuQamar SF. | Front Microbiol | 10.3389/fmicb.2018.00829 | 2018 | ||
| Chitinase-producing bacteria and their role in biocontrol. | Veliz EA, Martinez-Hidalgo P, Hirsch AM. | AIMS Microbiol | 10.3934/microbiol.2017.3.689 | 2017 | ||
| Phylogeny | Screening of Rhizospheric Actinomycetes for Various In-vitro and In-vivo Plant Growth Promoting (PGP) Traits and for Agroactive Compounds. | Anwar S, Ali B, Sajid I. | Front Microbiol | 10.3389/fmicb.2016.01334 | 2016 | |
| In Vitro and In Vivo Plant Growth Promoting Activities and DNA Fingerprinting of Antagonistic Endophytic Actinomycetes Associates with Medicinal Plants. | Passari AK, Mishra VK, Gupta VK, Yadav MK, Saikia R, Singh BP. | PLoS One | 10.1371/journal.pone.0139468 | 2015 | ||
| [New elementary structures of actinomycete spores of the genera Actinomadura and Streptomyces]. | Soina VS, Agre NS. | Mikrobiologiia | 1979 | |||
| Enzymology | Enzymatic and genetic characterization of lignin depolymerization by Streptomyces sp. S6 isolated from a tropical environment. | Riyadi FA, Tahir AA, Yusof N, Sabri NSA, Noor MJMM, Akhir FNMD, Othman N, Zakaria Z, Hara H. | Sci Rep | 10.1038/s41598-020-64817-4 | 2020 | |
| Phylogeny | A sensitive pH indicator-based spectrophotometric assay for PHB depolymerase activity on microtiter plates. | Camacho-Ruiz MA, Muller-Santos M, Hernandez-Mancillas XD, Armenta-Perez VP, Zamora-Gonzalez E, Rodriguez JA | Anal Methods | 10.1039/d0ay00840k | 2020 | |
| Enzymology | Purification and characterization of seven bioactive compounds from the newly isolated Streptomyces cavourensis TN638 strain via solid-state fermentation. | Kaaniche F, Hamed A, Elleuch L, Chakchouk-Mtibaa A, Smaoui S, Karray-Rebai I, Koubaa I, Arcile G, Allouche N, Mellouli L | Microb Pathog | 10.1016/j.micpath.2020.104106 | 2020 | |
| Phylogeny | Antimicrobial and Cytotoxic Properties of Bioactive Metabolites Produced by Streptomyces cavourensis YBQ59 Isolated from Cinnamomum cassia Prels in Yen Bai Province of Vietnam. | Vu HT, Nguyen DT, Nguyen HQ, Chu HH, Chu SK, Chau MV, Phi QT | Curr Microbiol | 10.1007/s00284-018-1517-x | 2018 | |
| Genetics | Complete genome sequence of soil actinobacteria Streptomyces cavourensis TJ430. | Wang P, Liu Z, Huang Y | J Basic Microbiol | 10.1002/jobm.201800181 | 2018 | |
| Phylogeny | Taxonomic study of a chromomycin-producing strain and reclassification of Streptomyces cavourensis subsp. washingtonensis as a later synonym of Streptomyces griseus. | Wu X, Wen Y, Qian C, Li O, Fang H, Chen W | Int J Syst Evol Microbiol | 10.1099/ijs.0.65628-0 | 2008 | |
| Phylogeny | Streptomyces rhizosphaericola sp. nov., an actinobacterium isolated from the wheat rhizosphere. | Vargas Hoyos HA, Nobre Santos S, Da Silva LJ, Paulino Silva FS, Bonaldo Genuario D, Domingues Zucchi T, Melo IS | Int J Syst Evol Microbiol | 10.1099/ijsem.0.003498 | 2019 | |
| Phylogeny | Streptomyces araujoniae sp. nov.: an actinomycete isolated from a potato tubercle. | da Silva LJ, Taketani RG, de Melo IS, Goodfellow M, Zucchi TD | Antonie Van Leeuwenhoek | 10.1007/s10482-013-9901-9 | 2013 |
| #9442 | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 40300 |
| #20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 ) |
| #20218 | Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 ) |
| #66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) . |
| #67770 | Japan Collection of Microorganism (JCM) ; Curators of the JCM; |
| #69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta . |
| #124043 | Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy . |
| #125438 | Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 ) |
| #125439 | Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 . |
| #126262 | A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 ) |
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