Helicobacter pylori CCUG 41936 is a microaerophile bacterium that was isolated from Human.
microaerophile Bacteria| @ref 20215 |
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| Domain Bacteria |
| Phylum Pseudomonadota |
| Class Epsilonproteobacteria |
| Order Campylobacterales |
| Family Helicobacteraceae |
| Genus Helicobacter |
| Species Helicobacter pylori |
| Full scientific name Helicobacter pylori (Marshall et al. 1985) Goodwin et al. 1989 |
| Synonyms (3) |
| 55271 | Incubation period3 days |
| @ref | Growth | Type | Temperature (°C) | |
|---|---|---|---|---|
| 55271 | positive | growth | 37 |
| 55271 | Oxygen tolerancemicroaerophile |
| @ref | pathway | enzyme coverage | annotated reactions | external links | |
|---|---|---|---|---|---|
| 66794 | CDP-diacylglycerol biosynthesis | 100 | 2 of 2 | ||
| 66794 | biotin biosynthesis | 100 | 4 of 4 | ||
| 66794 | folate polyglutamylation | 100 | 1 of 1 | ||
| 66794 | anapleurotic synthesis of oxalacetate | 100 | 1 of 1 | ||
| 66794 | UDP-GlcNAc biosynthesis | 100 | 3 of 3 | ||
| 66794 | ppGpp biosynthesis | 100 | 4 of 4 | ||
| 66794 | coenzyme A metabolism | 100 | 4 of 4 | ||
| 66794 | palmitate biosynthesis | 95.45 | 21 of 22 | ||
| 66794 | chorismate metabolism | 88.89 | 8 of 9 | ||
| 66794 | lipid A biosynthesis | 88.89 | 8 of 9 | ||
| 66794 | tetrahydrofolate metabolism | 85.71 | 12 of 14 | ||
| 66794 | vitamin B1 metabolism | 84.62 | 11 of 13 | ||
| 66794 | 1,4-dihydroxy-6-naphthoate biosynthesis | 83.33 | 5 of 6 | ||
| 66794 | peptidoglycan biosynthesis | 80 | 12 of 15 | ||
| 66794 | hydrogen production | 80 | 4 of 5 | ||
| 66794 | molybdenum cofactor biosynthesis | 77.78 | 7 of 9 | ||
| 66794 | sulfopterin metabolism | 75 | 3 of 4 | ||
| 66794 | CMP-KDO biosynthesis | 75 | 3 of 4 | ||
| 66794 | propanol degradation | 71.43 | 5 of 7 | ||
| 66794 | cardiolipin biosynthesis | 71.43 | 5 of 7 | ||
| 66794 | photosynthesis | 71.43 | 10 of 14 | ||
| 66794 | threonine metabolism | 70 | 7 of 10 | ||
| 66794 | Entner Doudoroff pathway | 70 | 7 of 10 | ||
| 66794 | d-mannose degradation | 66.67 | 6 of 9 | ||
| 66794 | aspartate and asparagine metabolism | 66.67 | 6 of 9 | ||
| 66794 | NAD metabolism | 66.67 | 12 of 18 | ||
| 66794 | acetoin degradation | 66.67 | 2 of 3 | ||
| 66794 | citric acid cycle | 64.29 | 9 of 14 | ||
| 66794 | glutathione metabolism | 64.29 | 9 of 14 | ||
| 66794 | pentose phosphate pathway | 63.64 | 7 of 11 | ||
| 66794 | 6-hydroxymethyl-dihydropterin diphosphate biosynthesis | 62.5 | 5 of 8 | ||
| 66794 | cellulose degradation | 60 | 3 of 5 | ||
| 66794 | methylglyoxal degradation | 60 | 3 of 5 | ||
| 66794 | flavin biosynthesis | 60 | 9 of 15 | ||
| 66794 | isoprenoid biosynthesis | 57.69 | 15 of 26 | ||
| 66794 | reductive acetyl coenzyme A pathway | 57.14 | 4 of 7 | ||
| 66794 | ubiquinone biosynthesis | 57.14 | 4 of 7 | ||
| 66794 | serine metabolism | 55.56 | 5 of 9 | ||
| 66794 | proline metabolism | 54.55 | 6 of 11 | ||
| 66794 | vitamin B6 metabolism | 54.55 | 6 of 11 | ||
| 66794 | phenylalanine metabolism | 53.85 | 7 of 13 | ||
| 66794 | glutamate and glutamine metabolism | 53.57 | 15 of 28 | ||
| 66794 | purine metabolism | 53.19 | 50 of 94 | ||
| 66794 | polyamine pathway | 52.17 | 12 of 23 | ||
| 66794 | pyrimidine metabolism | 51.11 | 23 of 45 | ||
| 66794 | gluconeogenesis | 50 | 4 of 8 | ||
| 66794 | cis-vaccenate biosynthesis | 50 | 1 of 2 | ||
| 66794 | acetate fermentation | 50 | 2 of 4 | ||
| 66794 | ethanol fermentation | 50 | 1 of 2 | ||
| 66794 | adipate degradation | 50 | 1 of 2 | ||
| 66794 | isoleucine metabolism | 50 | 4 of 8 | ||
| 66794 | dolichol and dolichyl phosphate biosynthesis | 50 | 1 of 2 | ||
| 66794 | heme metabolism | 50 | 7 of 14 | ||
| 66794 | selenocysteine biosynthesis | 50 | 3 of 6 | ||
| 66794 | suberin monomers biosynthesis | 50 | 1 of 2 | ||
| 66794 | oxidative phosphorylation | 47.25 | 43 of 91 | ||
| 66794 | glycolysis | 47.06 | 8 of 17 | ||
| 66794 | methionine metabolism | 46.15 | 12 of 26 | ||
| 66794 | lysine metabolism | 45.24 | 19 of 42 | ||
| 66794 | CO2 fixation in Crenarchaeota | 44.44 | 4 of 9 | ||
| 66794 | valine metabolism | 44.44 | 4 of 9 | ||
| 66794 | cysteine metabolism | 44.44 | 8 of 18 | ||
| 66794 | degradation of aromatic, nitrogen containing compounds | 41.67 | 5 of 12 | ||
| 66794 | alanine metabolism | 41.38 | 12 of 29 | ||
| 66794 | glycine metabolism | 40 | 4 of 10 | ||
| 66794 | glycogen metabolism | 40 | 2 of 5 | ||
| 66794 | leucine metabolism | 38.46 | 5 of 13 | ||
| 66794 | urea cycle | 38.46 | 5 of 13 | ||
| 66794 | ketogluconate metabolism | 37.5 | 3 of 8 | ||
| 66794 | non-pathway related | 36.84 | 14 of 38 | ||
| 66794 | tryptophan metabolism | 36.84 | 14 of 38 | ||
| 66794 | tyrosine metabolism | 35.71 | 5 of 14 | ||
| 66794 | lipid metabolism | 35.48 | 11 of 31 | ||
| 66794 | formaldehyde oxidation | 33.33 | 1 of 3 | ||
| 66794 | cyanate degradation | 33.33 | 1 of 3 | ||
| 66794 | glycolate and glyoxylate degradation | 33.33 | 2 of 6 | ||
| 66794 | IAA biosynthesis | 33.33 | 1 of 3 | ||
| 66794 | pantothenate biosynthesis | 33.33 | 2 of 6 | ||
| 66794 | (5R)-carbapenem carboxylate biosynthesis | 33.33 | 1 of 3 | ||
| 66794 | degradation of hexoses | 33.33 | 6 of 18 | ||
| 66794 | phenylpropanoid biosynthesis | 30.77 | 4 of 13 | ||
| 66794 | sulfate reduction | 30.77 | 4 of 13 | ||
| 66794 | coenzyme M biosynthesis | 30 | 3 of 10 | ||
| 66794 | propionate fermentation | 30 | 3 of 10 | ||
| 66794 | arginine metabolism | 29.17 | 7 of 24 | ||
| 66794 | d-xylose degradation | 27.27 | 3 of 11 | ||
| 66794 | C4 and CAM-carbon fixation | 25 | 2 of 8 | ||
| 66794 | toluene degradation | 25 | 1 of 4 | ||
| 66794 | butanoate fermentation | 25 | 1 of 4 | ||
| 66794 | glycogen biosynthesis | 25 | 1 of 4 | ||
| 66794 | nitrate assimilation | 22.22 | 2 of 9 |
| Metadata FA analysis | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| type of FA analysis | whole cell analysis | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| method/protocol | CCUG | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| @ref | 55271 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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| @ref | Sample type | Geographic location | Country | Country ISO 3 Code | Continent | |
|---|---|---|---|---|---|---|
| 55271 | Human | Southampton | United Kingdom | GBR | Europe |
| Title | Authors | Journal | DOI | Year | |
|---|---|---|---|---|---|
| Molecular fusion events in carcinogenic organisms: a bioinformatics study for the detection of fused proteins between viruses, bacteria and eukaryotes. | Papakonstantinou E, Io Diakou K, Mitsis T, Dragoumani K, Bacopoulou F, Megalooikonomou V, Kossida S, Chrousos GP, Vlachakis D. | EMBnet J | 10.14806/ej.27.0.1004 | 2022 | |
| Antigenic sites in SARS-CoV-2 spike RBD show molecular similarity with pathogenic antigenic determinants and harbors peptides for vaccine development. | Dakal TC. | Immunobiology | 10.1016/j.imbio.2021.152091 | 2021 |
| #20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 ) |
| #55271 | Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 41936 |
| #66794 | Antje Chang, Lisa Jeske, Sandra Ulbrich, Julia Hofmann, Julia Koblitz, Ida Schomburg, Meina Neumann-Schaal, Dieter Jahn, Dietmar Schomburg: BRENDA, the ELIXIR core data resource in 2021: new developments and updates. Nucleic Acids Res. 49: D498 - D508 2020 ( DOI 10.1093/nar/gkaa1025 , PubMed 33211880 ) |
| #126262 | A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 ) |
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https://doi.org/10.13145/bacdive150675.20251217.10
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