Streptomyces badius 1203/53 is a spore-forming, mesophilic prokaryote that builds an aerial mycelium and was isolated from soil.
spore-forming mesophilic genome sequence 16S sequence
SI-ID 13357
| @ref 20215 |
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Last LPSN update
2025-12-16 09:50:30 |
| Domain Bacillati |
| Phylum Actinomycetota |
| Class Actinomycetes |
| Order Kitasatosporales |
| Family Streptomycetaceae |
| Genus Streptomyces |
| Species Streptomyces badius |
| Full scientific name Streptomyces badius (Kudrina 1957) Pridham et al. 1958 (Approved Lists 1980) |
| Synonyms (1) |
| BacDive ID | Other strains from Streptomyces badius (2) | Type strain |
|---|---|---|
| 105484 | S. badius ST033322(HKI), | |
| 105485 | S. badius SF006188(FSU), |
| @ref | Name | Growth | Medium link | Composition | |
|---|---|---|---|---|---|
| 9341 | GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) | Medium recipe at MediaDive  | Name: GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) Composition: Agar 18.0 g/l Malt extract 10.0 g/l Yeast extract 4.0 g/l Glucose 4.0 g/l CaCO3 2.0 g/l Distilled water | ||
| 19408 | ISP 2 | Name: ISP 2 / Yeast Malt Agar (5265); 5265 Composition Malt extract 10.0 g/l Yeast extract 4.0 g/l Glucose 4.0 g/l Agar 15.0 g/l Preparation: Sterilisation: 20 minutes at 121°C pH before sterilisation: 7.0 Usage: Maintenance and Taxonomy Organisms: All Actinomycetes | |||
| 19408 | ISP 3 | Name: ISP 3; 5315 Composition Dog oat flakes 20.0 g/l Trace element solution (5314) 2.5 ml/l Agar 18.0 g/l Preparation: Oat flakes are cooked for 20 minutes, trace element solution and agar are added (in the case of non rolled oat flakes the suspension has to bee filtrated). Sterilisation: 20 minutes at 121°C pH before sterilisation: 7.8 Usage: Maintenance and taxonomy (e.g. SEM As liquid medium for metabolite production) Organisms: All Actinomycetes Trace element solution 5314 Name: Trace element solution 5314; 5314 Composition CaCl2 x H2O 3.0 g/l Fe-III-citrate 1.0 g/l MnSO4 0.2 g/l ZnCl2 0.1 g/l CuSO4 x 5 H2O 0.025 g/l Sodium tetra borate 0.2 g/l CoCl2 x 6 H2O 0.004 g/l Sodium molybdate 0.01 g/l Preparation: Use double destillated water. Sterilisation: 20 minutes at 121°C pH before sterilisation: Usage: Trace element solution for different media Organisms: | |||
| 19408 | ISP 4 | Name: ISP 4; DSM 547 Solution I: Difco soluble starch, 10.0 g. Make a paste of the starch with a small amount of cold distilled water and bring to a volume of 500 ml. Solution II: CaCO3 2.0 g K2HPO4 (anhydrous) 1.0 g MgSO4 x 7 H2O 1.0 g NaCl 1.0 g (NH4)2SO4 2.0 g Distilled water 500.0 ml Trace salt solution (see below) 1.0 ml The pH should be between 7.0 and 7.4. Do not adjust if it is within this range. Mix solutions I and II together. Add 20.0 g agar. Liquify agar by steaming at 100°C for 10 to 20 min. Trace element solution: FeSO4 x 7 H2O 0.1 g MnCl2 x 4 H2O 0.1 g ZnSO4 x 7 H2O 0.1 g Distilled water 100.0 ml | |||
| 19408 | ISP 5 | Name: ISP 5 (5323) Composition L-Asparagine 1.0 g/l Glycerol 10.0 g/l K2HPO4 1.0 g/l Salt solution (see preparation) 1.0 ml/l Agar 20.0 g/l Preparation: Salt solution 1.0 g FeSO4 x 7 H2O 1.0 g MnCl2 x 4 H2O 1.0 g ZNSO4 x 7 H2O in 100 ml water Sterilisation: 20 minutes at 121°C pH before sterilisation: 7.2 Usage: Maintenance and taxonomy Organisms: All Actinomycetes | |||
| 19408 | ISP 6 | Name: ISP 6 (5318) Composition Peptone 15.0 g/l Proteose peptose 5.0 g/l Ferric ammonium citrate 0.5 g/l Sodium glycerophosphate 1.0 g/l Sodium thiosulfate 0.08 g/l Yeast extract 1.0 g/l Agar 15.0 g/l Sterilisation: 20 minutes at 121°C pH before sterilisation: Usage: Production of melanoid pigments Organisms: All Actinomycetes | |||
| 19408 | ISP 7 | Name: ISP 7 (5322) Composition Glycerol 15.0 g/l L-Tyrosine 0.5 g/l L-Asparagine 1.0 g/l K2HPO4 0.5 g/l NaCl 0.5 g/l FeSO4 x 7 H2O 0.01 g/l Trace element solution 5343 1.0 ml/l Agar 20.0 Sterilisation: 20 minutes at 121°C pH before sterilisation: 7.3 Usage: Production of melanoid pigments Organisms: All Actinomycetes |
| @ref | Salt | Growth | Tested relation | Concentration | |
|---|---|---|---|---|---|
| 19408 | NaCl | positive | maximum | 5 % |
| 67770 | Observationquinones: MK-9(H6), MK-9(H8) |
| @ref | Chebi-ID | Metabolite | Utilization activity | |
|---|---|---|---|---|
| 19408 | 22599 ChEBI | arabinose | + | |
| 68368 | 29016 ChEBI | arginine | + | from API 20E |
| 19408 | 62968 ChEBI | cellulose | - | |
| 68368 | 16947 ChEBI | citrate | + | from API 20E |
| 19408 | 28757 ChEBI | fructose | - | |
| 68368 | 5291 ChEBI | gelatin | + | from API 20E |
| 19408 | 17234 ChEBI | glucose | + | |
| 68368 | 25094 ChEBI | lysine | - | from API 20E |
| 19408 | 29864 ChEBI | mannitol | - | |
| 19408 | 17268 ChEBI | myo-inositol | - | |
| 68368 | 18257 ChEBI | ornithine | - | from API 20E |
| 19408 | 16634 ChEBI | raffinose | - | |
| 19408 | 26546 ChEBI | rhamnose | - | |
| 19408 | 17992 ChEBI | sucrose | - | |
| 68368 | 27897 ChEBI | tryptophan | - | from API 20E |
| 68368 | 16199 ChEBI | urea | + | from API 20E |
| 19408 | 18222 ChEBI | xylose | - |
| @ref | Value | Activity | Ec | |
|---|---|---|---|---|
| 68368 | arginine dihydrolase | + | 3.5.3.6 | from API 20E |
| 68368 | beta-galactosidase | + | 3.2.1.23 | from API 20E |
| 68368 | gelatinase | + | from API 20E | |
| 68368 | lysine decarboxylase | - | 4.1.1.18 | from API 20E |
| 68368 | ornithine decarboxylase | - | 4.1.1.17 | from API 20E |
| 68368 | tryptophan deaminase | + | 4.1.99.1 | from API 20E |
| 68368 | urease | + | 3.5.1.5 | from API 20E |
Global distribution of 16S sequence AY999783 (>99% sequence identity) for Streptomyces from Microbeatlas 
 Aquatic Samples |
286 |
 Soil Samples |
2441 |
 Animal Samples |
1009 |
 Plant Samples |
294 |
| Total Samples | 4030 |
| @ref | Description | Assembly level | INSDC accession | BV-BRC accession | IMG accession | NCBI tax ID | Score | |
|---|---|---|---|---|---|---|---|---|
| 66792 | ASM1464941v1 assembly for Streptomyces badius JCM 4350 | scaffold | GCA_014649415   | 1941.9  | 8109830455  | 1941 | 14.49 | |
| @ref | Description | Accession | Length | Database | NCBI tax ID | |
|---|---|---|---|---|---|---|
| 20218 | Streptomyces badius gene for 16S ribosomal RNA, partial sequence, strain: JCM 4350 | D44068 | 120 | | 1941 | |
| 20218 | Streptomyces badius gene for 16S rRNA, partial sequence, strain: NBRC 12745 | AB184114 | 1474 |  | 1941 | |
| 20218 | Streptomyces badius strain NRRL B-2567 16S ribosomal RNA gene, partial sequence | AY999783 | 1496 | | 1941 | |
| 124043 | Streptomyces badius strain JCM 4350 16S ribosomal RNA gene, partial sequence. | MT760517 | 1327 | | 1941 | |
| 124043 | Streptomyces badius strain NRRL B-2567 16S ribosomal RNA gene, partial sequence. | OQ619103 | 1319 | | 1941 | |
| 124043 | Streptomyces badius strain NRRL B-2567 (T) 16S ribosomal RNA gene, partial sequence. | MK424307 | 1450 | | 1941 | |
| @ref | GC-content (mol%) | Method | |
|---|---|---|---|
| 67770 | 70 | fluorimetric |
| Title | Authors | Journal | DOI | Year | |
|---|---|---|---|---|---|
| A New Albomycin-Producing Strain of Streptomyces globisporus subsp. globisporus May Provide Protection for Ants Messor structor. | Zakalyukina YV, Pavlov NA, Lukianov DA, Marina VI, Marina VI, Belozerova OA, Tashlitsky VN, Guglya EB, Osterman IA, Biryukov MV. | Insects | 10.3390/insects13111042 | 2022 | |
| The bla gene of the cephamycin cluster of Streptomyces clavuligerus encodes a class A beta-lactamase of low enzymatic activity. | Perez-Llarena F, Martin JF, Galleni M, Coque JJ, Fuente JL, Frere JM, Liras P. | J Bacteriol | 10.1128/jb.179.19.6035-6040.1997 | 1997 | |
| Isolation and Evaluation of Streptomyces melanogenes YBS22 with Potential Application for Biocontrol of Rice Blast Disease. | Song L, Wang F, Liu C, Guan Z, Wang M, Zhong R, Xi H, Zhao Y, Wen C. | Microorganisms | 10.3390/microorganisms11122988 | 2023 | |
| The Co-Inoculation Effect on Triticum aestivum Growth with Synthetic Microbial Communities (SynComs) and Their Potential in Agrobiotechnology | Mazylyte R, Kailiuviene J, Mazoniene E, Orola L, Kaziuniene J, Mazylyte K, Lastauskiene E, Gegeckas A. | Plants (Basel) | 2024 | | |
| Rational construction of genome-minimized Streptomyces host for the expression of secondary metabolite gene clusters. | Li H, Gao S, Shi S, Zhao X, Ye H, Luo Y. | Synth Syst Biotechnol | 10.1016/j.synbio.2024.04.017 | 2024 | |
| Complete genome sequencing and in silico genome mining reveal the promising metabolic potential in Streptomyces strain CS-7. | Alam K, Hao J, Zhong L, Fan G, Ouyang Q, Islam MM, Islam S, Sun H, Zhang Y, Li R, Li A. | Front Microbiol | 10.3389/fmicb.2022.939919 | 2022 | |
| Nature's lab for derivatization: new and revised structures of a variety of streptophenazines produced by a sponge-derived Streptomyces strain. | Kunz AL, Labes A, Wiese J, Bruhn T, Bringmann G, Imhoff JF. | Mar Drugs | 10.3390/md12041699 | 2014 | |
| Identification of environmental Actinobacteria in buildings by means of chemotaxonomy, 16S rRNA sequencing, and MALDI-TOF MS. | Chudzik A, Jalkanen K, Taubel M, Szponar B, Pasciak M. | Microbiol Spectr | 10.1128/spectrum.03596-23 | 2024 | |
| Dinactin from a new producer, Streptomyces badius gz-8, and its antifungal activity against the rubber anthracnose fungus Colletotrichum gloeosporioides. | Zhang K, Gu L, Zhang Y, Liu Z, Li X. | Microbiol Res | 10.1016/j.micres.2020.126548 | 2020 | |
| A Novel Strain Burkholderia theae GS2Y Exhibits Strong Biocontrol Potential Against Fungal Diseases in Tea Plants (Camellia sinensis). | Dong Y, Wang X, Feng GD, Yao Q, Zhu H. | Cells | 10.3390/cells13211768 | 2024 | |
| Actinobacterial community in Shuanghe Cave using culture-dependent and -independent approaches. | Long Y, Jiang J, Hu X, Zhou J, Hu J, Zhou S. | World J Microbiol Biotechnol | 10.1007/s11274-019-2713-y | 2019 | |
| Oligomycin-producing Streptomyces sp. newly isolated from Swiss soils efficiently protect Arabidopsis thaliana against Botrytis cinerea. | Louviot F, Abdelrahman O, Abou-Mansour E, L'Haridon F, Allard P-M, Falquet L, Weisskopf L. | mSphere | 10.1128/msphere.00667-23 | 2024 | |
| Impact of altitudinal variations on plant growth dynamics, nutritional composition, and free living rhizospheric N2 fixing bacterial community of Eruca sativa. | Kumar N, Kaur B, Sharma D, Korpole S, Shukla S, Bhardwaj P, Patel MK, Acharya S, Khatri M, Saxena S. | Sci Rep | 10.1038/s41598-025-98242-2 | 2025 | |
| Characteristics of Raw Starch-Digesting alpha-Amylase of Streptomyces badius DB-1 with Transglycosylation Activity and Its Applications. | Shivlata L, Satyanarayana T. | Appl Biochem Biotechnol | 10.1007/s12010-016-2284-4 | 2017 | |
| Biological pretreatment of corn straw for enhancing degradation efficiency and biogas production. | Li P, He C, Li G, Ding P, Lan M, Gao Z, Jiao Y. | Bioengineered | 10.1080/21655979.2020.1733733 | 2020 | |
| Larvicidal potential of Asteraceae family endophytic actinomycetes against Culex quinquefasciatus mosquito larvae. | Tanvir R, Sajid I, Hasnain S. | Nat Prod Res | 10.1080/14786419.2014.919579 | 2014 | |
| Production of hydroxy marilone C as a bioactive compound fromStreptomyces badius. | El Sayed OH, Asker MMS, Swelim MA, Abbas IH, Attwa AI, El Awady ME. | J Genet Eng Biotechnol | 10.1016/j.jgeb.2016.04.001 | 2016 | |
| Exploring the diversity and antimicrobial potential of actinomycetes isolated from different environments in Saudi Arabia: a systematic review. | Helmi NR. | Front Microbiol | 10.3389/fmicb.2025.1568899 | 2025 | |
| Natural Products from Singapore Soil-Derived Streptomycetaceae Family and Evaluation of Their Biological Activities. | Chin EJ, Ching KC, Tan ZY, Wibowo M, Leong CY, Yang LK, Ng VWP, Seow DCS, Kanagasundaram Y, Ng SB. | Molecules | 10.3390/molecules28155832 | 2023 | |
| Antimicrobial Activity and Identification of the Biosynthetic Gene Cluster of X-14952B From Streptomyces sp. 135. | Li N, Chen S, Yan Z, Han J, Ta Y, Pu T, Wang Y. | Front Microbiol | 10.3389/fmicb.2021.703093 | 2021 | |
| Isolation, antibacterial screening, and identification of bioactive cave dwelling bacteria in Fiji. | Pipite A, Lockhart PJ, McLenachan PA, Christi K, Kumar D, Prasad S, Subramani R. | Front Microbiol | 10.3389/fmicb.2022.1012867 | 2022 | |
| Differential bacteriostatic effects of sucralose on various species of environmental bacteria. | Omran A, Baker R, Coughlin C. | ISRN Toxicol | 10.1155/2013/415070 | 2013 | |
| Native Phytoremediation Potential of Urtica dioica for Removal of PCBs and Heavy Metals Can Be Improved by Genetic Manipulations Using Constitutive CaMV 35S Promoter. | Viktorova J, Jandova Z, Madlenakova M, Prouzova P, Bartunek V, Vrchotova B, Lovecka P, Musilova L, Macek T. | PLoS One | 10.1371/journal.pone.0167927 | 2016 | |
| Metabolic effects of sucralose on environmental bacteria. | Omran A, Ahearn G, Bowers D, Swenson J, Coughlin C. | J Toxicol | 10.1155/2013/372986 | 2013 | |
| Bioprospecting of desert actinobacteria with special emphases on griseoviridin, mitomycin C and a new bacterial metabolite producing Streptomyces sp. PU-KB10-4. | Saleem M, Hassan A, Li F, Lu Q, Ponomareva LV, Parkin S, Sun C, Thorson JS, Shaaban KA, Sajid I. | BMC Microbiol | 10.1186/s12866-023-02770-8 | 2023 | |
| Isolation and Characterization of Actinobacteria from Algerian Sahara Soils with Antimicrobial Activities. | Mohamed H, Miloud B, Zohra F, Garcia-Arenzana JM, Veloso A, Rodriguez-Couto S. | Int J Mol Cell Med | 10.22088/acadpub.bums.6.2.5 | 2017 | |
| Identification of cholesterol-assimilating actinomycetes strain and application of statistical modeling approaches for improvement of cholesterol oxidase production by Streptomyces anulatus strain NEAE-94. | El-Naggar NE, El-Shweihy NM. | BMC Microbiol | 10.1186/s12866-020-01775-x | 2020 | |
| Biotransformation of quinoxaline by Streptomyces badius. | Sutherland JB, Evans FE, Freeman JP, Williams AJ. | Lett Appl Microbiol | 10.1111/j.1472-765x.1996.tb01142.x | 1996 | |
| Anti-mycobacterial nucleoside antibiotics from a marine-derived Streptomyces sp. TPU1236A. | Bu YY, Yamazaki H, Ukai K, Namikoshi M. | Mar Drugs | 10.3390/md12126102 | 2014 | |
| Bacterial degradation of kraft lignin: production and characterization of water-soluble intermediates derived from Streptomyces badius and Streptomyces viridosporus | Vidal PF, Bouchard J, Overend RP, Chornet E, Giroux H, Lamy F. | ACS Symp Ser Am Chem Soc | 1989 | | |
| Beta-lactamase genes of Streptomyces badius, Streptomyces cacaoi and Streptomyces fradiae: cloning and expression in Streptomyces lividans. | Jaurin B, Forsman M, Haggstrom B. | Biochim Biophys Acta | 10.1016/0167-4781(88)90154-6 | 1988 | |
| [Isolation and study of the properties of the hemagglutinins produced by Streptomyces badius actinomycetes]. | Beliaev OA, Grinberg GE, Konev IuE, Dubovenko LL, Mikhailets GA. | Prikl Biokhim Mikrobiol | 1985 | | |
| A Marine Actinomycete Rescues Caenorhabditis elegans from Pseudomonas aeruginosa Infection through Restitution of Lysozyme 7. | Fatin SN, Boon-Khai T, Shu-Chien AC, Khairuddean M, Al-Ashraf Abdullah A. | Front Microbiol | 10.3389/fmicb.2017.02267 | 2017 | |
| Overcoming challenges in lignocellulosic biomass pretreatment for second-generation (2G) sugar production: emerging role of nano, biotechnological and promising approaches. | Antunes FAF, Chandel AK, Teran-Hilares R, Ingle AP, Rai M, Dos Santos Milessi TS, da Silva SS, Dos Santos JC. | 3 Biotech | 10.1007/s13205-019-1761-1 | 2019 | |
| Molecular analysis of beta-lactamases from four species of Streptomyces: comparison of amino acid sequences with those of other beta-lactamases. | Forsman M, Haggstrom B, Lindgren L, Jaurin B. | J Gen Microbiol | 10.1099/00221287-136-3-589 | 1990 | |
| Potential Use of Microbial Enzymes for the Conversion of Plastic Waste Into Value-Added Products: A Viable Solution. | Tamoor M, Samak NA, Jia Y, Mushtaq MU, Sher H, Bibi M, Xing J. | Front Microbiol | 10.3389/fmicb.2021.777727 | 2021 | |
| Degradation of Kraft Indulin Lignin by Streptomyces viridosporus and Streptomyces badius. | Giroux H, Vidal P, Bouchard J, Lamy F. | Appl Environ Microbiol | 10.1128/aem.54.12.3064-3070.1988 | 1988 | |
| Codenitrification and denitrification are dual metabolic pathways through which dinitrogen evolves from nitrate in Streptomyces antibioticus. | Kumon Y, Sasaki Y, Kato I, Takaya N, Shoun H, Beppu T. | J Bacteriol | 10.1128/jb.184.11.2963-2968.2002 | 2002 | |
| ACI-1 from Acidaminococcus fermentans: characterization of the first beta-lactamase in Anaerobic cocci. | Galan JC, Reig M, Navas A, Baquero F, Blazquez J. | Antimicrob Agents Chemother | 10.1128/aac.44.11.3144-3149.2000 | 2000 | |
| Biochemical-genetic analysis and distribution of FAR-1, a class A beta-lactamase from Nocardia farcinica. | Laurent F, Poirel L, Naas T, Chaibi EB, Labia R, Boiron P, Nordmann P. | Antimicrob Agents Chemother | 10.1128/aac.43.7.1644 | 1999 | |
| Phenotypic and Genomic Characterization of Streptomyces pakalii sp. nov., a Novel Species with Anti-Biofilm and Anti-Quorum Sensing Activity in ESKAPE Bacteria. | Chavez-Hernandez M, Ortiz-Alvarez J, Morales-Jimenez J, Villa-Tanaca L, Hernandez-Rodriguez C. | Microorganisms | 10.3390/microorganisms11102551 | 2023 | |
How to citeIf you want to cite this particular strain cite the following doi:
https://doi.org/10.13145/bacdive15046.20251217.10
When using BacDive for research please cite the following paper
BacDive in 2025: the core database for prokaryotic strain data
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