Kitasatospora aureofaciens A-377 is an obligate aerobe, spore-forming, Gram-positive bacterium that builds an aerial mycelium and produces antibiotic compounds.
antibiotic compound production spore-forming Gram-positive rod-shaped obligate aerobe genome sequence 16S sequence Bacteria| @ref 20215 |
|
|
| Domain Bacteria |
| Phylum Actinomycetota |
| Class Actinomycetes |
| Order Kitasatosporales |
| Family Streptomycetaceae |
| Genus Kitasatospora |
| Species Kitasatospora aureofaciens |
| Full scientific name Kitasatospora aureofaciens (Duggar 1948) Labeda et al. 2017 |
| Synonyms (4) |
| @ref | Forms multicellular complex | Complex name | Complex color | Medium name | |
|---|---|---|---|---|---|
| 69247 | Aerial mycelium | Ral 7036 platinum grey, ral 9016 traffic white | ISP 2 | ||
| 69247 | Aerial mycelium | Ral 7023 concrete grey | ISP 3 | ||
| 69247 | Aerial mycelium | Ral 7006 beige grey | ISP 4 | ||
| 69247 | Aerial mycelium | Ral 7006 beige grey, ral 9001 cream | ISP 5 | ||
| 69247 | Aerial mycelium | ISP 6 | |||
| 69247 | Aerial mycelium | ISP 7 | |||
| 69247 | Aerial mycelium | suter with tyrosine | |||
| 69247 | Aerial mycelium | suter without tyrosine |
| @ref | Production | Name | |
|---|---|---|---|
| 69247 | soluble pigment |
| @ref: | 9330 |
| multimedia content: | DSM_40127.jpg |
| multimedia.multimedia content: | https://www.dsmz.de/microorganisms/photos/DSM_40127.jpg |
| caption: | Medium 84 28°C |
| intellectual property rights: | © Leibniz-Institut DSMZ |
| manual_annotation: | 1 |
| @ref: | 69247 |
| multimedia content: | DSM_40127_image3.jpeg |
| multimedia.multimedia content: | DSM_40127_image3.jpeg |
| caption: | Plates (65, ISP2, ISP3, ISP4, ISP5, ISP7) |
| intellectual property rights: | Helmholtz-Zentrum für Infektionsforschung GmbH |
| manual_annotation: | 1 |
| @ref: | 69247 |
| multimedia content: | DSM_40127_image4.jpeg |
| multimedia.multimedia content: | DSM_40127_image4.jpeg |
| caption: | Plates (65, ISP2, ISP3, ISP4, ISP5, ISP7) |
| intellectual property rights: | Helmholtz-Zentrum für Infektionsforschung GmbH |
| manual_annotation: | 1 |
| @ref | Name | Growth | Medium link | Composition | |
|---|---|---|---|---|---|
| 9330 | ROLLED OATS MINERAL MEDIUM (DSMZ Medium 84) | Medium recipe at MediaDive | Name: ROLLED OATS MINERAL MEDIUM (DSMZ Medium 84) Composition: Agar 20.0 g/l Rolled oats 20.0 g/l ZnSO4 x 7 H2O 0.001 g/l MnCl2 x 4 H2O 0.001 g/l FeSO4 x 7 H2O 0.001 g/l Distilled water | ||
| 9330 | GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) | Medium recipe at MediaDive | Name: GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) Composition: Agar 18.0 g/l Malt extract 10.0 g/l Yeast extract 4.0 g/l Glucose 4.0 g/l CaCO3 2.0 g/l Distilled water | ||
| 37599 | MEDIUM 122 - for Streptomyces | Distilled water make up to (1000.000 ml);Agar (15.000 g);Yeast extract (2.000 g);Starch maize (10.000 g) | |||
| 116569 | CIP Medium 122 | Medium recipe at CIP |
| @ref | Salt | Growth | Tested relation | Concentration | |
|---|---|---|---|---|---|
| 69247 | NaCl | positive | growth | 0 % |
| @ref | Chebi-ID | Metabolite | Utilization activity | Kind of utilization tested | |
|---|---|---|---|---|---|
| 69247 | 22599 ChEBI | arabinose | +/- | growth | |
| 68368 | 29016 ChEBI | arginine | + | hydrolysis | from API 20E |
| 69247 | 62968 ChEBI | cellulose | - | growth | |
| 68368 | 16947 ChEBI | citrate | - | assimilation | from API 20E |
| 68379 | 17634 ChEBI | D-glucose | - | fermentation | from API Coryne |
| 68379 | 16899 ChEBI | D-mannitol | - | fermentation | from API Coryne |
| 68379 | 16988 ChEBI | D-ribose | - | fermentation | from API Coryne |
| 68379 | 65327 ChEBI | D-xylose | - | fermentation | from API Coryne |
| 68379 | 4853 ChEBI | esculin | - | hydrolysis | from API Coryne |
| 116569 | 4853 ChEBI | esculin | - | hydrolysis | |
| 69247 | 28757 ChEBI | fructose | +/- | growth | |
| 68379 | 5291 ChEBI | gelatin | + | hydrolysis | from API Coryne |
| 68368 | 5291 ChEBI | gelatin | + | hydrolysis | from API 20E |
| 69247 | 17234 ChEBI | glucose | + | growth | |
| 68379 | 28087 ChEBI | glycogen | - | fermentation | from API Coryne |
| 69247 | 17268 ChEBI | inositol | - | growth | |
| 68379 | 17716 ChEBI | lactose | - | fermentation | from API Coryne |
| 68368 | 25094 ChEBI | lysine | + | degradation | from API 20E |
| 68379 | 17306 ChEBI | maltose | - | fermentation | from API Coryne |
| 69247 | 37684 ChEBI | mannose | - | growth | |
| 68379 | 17632 ChEBI | nitrate | - | reduction | from API Coryne |
| 116569 | 17632 ChEBI | nitrate | - | reduction | |
| 116569 | 17632 ChEBI | nitrate | - | respiration | |
| 116569 | 16301 ChEBI | nitrite | - | reduction | |
| 68368 | 18257 ChEBI | ornithine | + | degradation | from API 20E |
| 69247 | 16634 ChEBI | raffinose | - | growth | |
| 69247 | 26546 ChEBI | rhamnose | - | growth | |
| 68379 | 17992 ChEBI | sucrose | - | fermentation | from API Coryne |
| 69247 | 17992 ChEBI | sucrose | +/- | growth | |
| 68368 | 27897 ChEBI | tryptophan | - | energy source | from API 20E |
| 68379 | 16199 ChEBI | urea | - | hydrolysis | from API Coryne |
| 68368 | 16199 ChEBI | urea | + | hydrolysis | from API 20E |
| 69247 | 18222 ChEBI | xylose | + | growth |
| @ref | Value | Activity | Ec | |
|---|---|---|---|---|
| 68382 | acid phosphatase | + | 3.1.3.2 | from API zym |
| 116569 | alcohol dehydrogenase | - | 1.1.1.1 | |
| 68379 | alkaline phosphatase | + | 3.1.3.1 | from API Coryne |
| 68382 | alpha-chymotrypsin | - | 3.4.21.1 | from API zym |
| 68382 | alpha-fucosidase | - | 3.2.1.51 | from API zym |
| 68379 | alpha-glucosidase | + | 3.2.1.20 | from API Coryne |
| 116569 | amylase | + | ||
| 68368 | arginine dihydrolase | + | 3.5.3.6 | from API 20E |
| 68382 | beta-galactosidase | + | 3.2.1.23 | from API zym |
| 116569 | beta-galactosidase | - | 3.2.1.23 | |
| 68379 | beta-galactosidase | - | 3.2.1.23 | from API Coryne |
| 68368 | beta-galactosidase | + | 3.2.1.23 | from API 20E |
| 68379 | beta-glucosidase | - | 3.2.1.21 | from API Coryne |
| 68382 | beta-glucuronidase | - | 3.2.1.31 | from API zym |
| 68379 | beta-glucuronidase | - | 3.2.1.31 | from API Coryne |
| 116569 | caseinase | + | 3.4.21.50 | |
| 116569 | catalase | + | 1.11.1.6 | |
| 116569 | DNase | + | ||
| 68382 | esterase (C 4) | + | from API zym | |
| 68382 | esterase lipase (C 8) | + | from API zym | |
| 116569 | gelatinase | +/- | ||
| 68379 | gelatinase | + | from API Coryne | |
| 68368 | gelatinase | + | from API 20E | |
| 116569 | lecithinase | - | ||
| 68382 | leucine arylamidase | + | 3.4.11.1 | from API zym |
| 68382 | lipase (C 14) | - | from API zym | |
| 116569 | lysine decarboxylase | - | 4.1.1.18 | |
| 68368 | lysine decarboxylase | + | 4.1.1.18 | from API 20E |
| 68382 | N-acetyl-beta-glucosaminidase | - | 3.2.1.52 | from API zym |
| 68379 | N-acetyl-beta-glucosaminidase | - | 3.2.1.52 | from API Coryne |
| 68382 | naphthol-AS-BI-phosphohydrolase | + | from API zym | |
| 116569 | ornithine decarboxylase | - | 4.1.1.17 | |
| 68368 | ornithine decarboxylase | + | 4.1.1.17 | from API 20E |
| 116569 | oxidase | - | ||
| 68379 | pyrazinamidase | - | 3.5.1.B15 | from API Coryne |
| 68379 | pyrrolidonyl arylamidase | - | 3.4.19.3 | from API Coryne |
| 68382 | trypsin | - | 3.4.21.4 | from API zym |
| 68368 | tryptophan deaminase | - | 4.1.99.1 | from API 20E |
| 116569 | tween esterase | - | ||
| 116569 | urease | - | 3.5.1.5 | |
| 68379 | urease | - | 3.5.1.5 | from API Coryne |
| 68368 | urease | + | 3.5.1.5 | from API 20E |
| @ref | pathway | enzyme coverage | annotated reactions | external links | |
|---|---|---|---|---|---|
| 66794 | hydrogen production | 100 | 5 of 5 | ||
| 66794 | 1,4-dihydroxy-6-naphthoate biosynthesis | 100 | 6 of 6 | ||
| 66794 | cis-vaccenate biosynthesis | 100 | 2 of 2 | ||
| 66794 | starch degradation | 100 | 10 of 10 | ||
| 66794 | cardiolipin biosynthesis | 100 | 7 of 7 | ||
| 66794 | palmitate biosynthesis | 100 | 22 of 22 | ||
| 66794 | biotin biosynthesis | 100 | 4 of 4 | ||
| 66794 | anapleurotic synthesis of oxalacetate | 100 | 1 of 1 | ||
| 66794 | coenzyme A metabolism | 100 | 4 of 4 | ||
| 66794 | CDP-diacylglycerol biosynthesis | 100 | 2 of 2 | ||
| 66794 | aspartate and asparagine metabolism | 100 | 9 of 9 | ||
| 66794 | ceramide biosynthesis | 100 | 1 of 1 | ||
| 66794 | ethanol fermentation | 100 | 2 of 2 | ||
| 66794 | adipate degradation | 100 | 2 of 2 | ||
| 66794 | aerobactin biosynthesis | 100 | 1 of 1 | ||
| 66794 | threonine metabolism | 100 | 10 of 10 | ||
| 66794 | UDP-GlcNAc biosynthesis | 100 | 3 of 3 | ||
| 66794 | formaldehyde oxidation | 100 | 3 of 3 | ||
| 66794 | glycine betaine biosynthesis | 100 | 5 of 5 | ||
| 66794 | folate polyglutamylation | 100 | 1 of 1 | ||
| 66794 | cyanate degradation | 100 | 3 of 3 | ||
| 66794 | valine metabolism | 100 | 9 of 9 | ||
| 66794 | glycolate and glyoxylate degradation | 100 | 6 of 6 | ||
| 66794 | methylglyoxal degradation | 100 | 5 of 5 | ||
| 66794 | suberin monomers biosynthesis | 100 | 2 of 2 | ||
| 66794 | phenylacetate degradation (aerobic) | 100 | 5 of 5 | ||
| 66794 | aminopropanol phosphate biosynthesis | 100 | 2 of 2 | ||
| 66794 | cellulose degradation | 100 | 5 of 5 | ||
| 66794 | ppGpp biosynthesis | 100 | 4 of 4 | ||
| 66794 | acetate fermentation | 100 | 4 of 4 | ||
| 66794 | phenylalanine metabolism | 92.31 | 12 of 13 | ||
| 66794 | proline metabolism | 90.91 | 10 of 11 | ||
| 66794 | pentose phosphate pathway | 90.91 | 10 of 11 | ||
| 66794 | Entner Doudoroff pathway | 90 | 9 of 10 | ||
| 66794 | d-mannose degradation | 88.89 | 8 of 9 | ||
| 66794 | NAD metabolism | 88.89 | 16 of 18 | ||
| 66794 | chorismate metabolism | 88.89 | 8 of 9 | ||
| 66794 | serine metabolism | 88.89 | 8 of 9 | ||
| 66794 | CO2 fixation in Crenarchaeota | 88.89 | 8 of 9 | ||
| 66794 | molybdenum cofactor biosynthesis | 88.89 | 8 of 9 | ||
| 66794 | ketogluconate metabolism | 87.5 | 7 of 8 | ||
| 66794 | C4 and CAM-carbon fixation | 87.5 | 7 of 8 | ||
| 66794 | isoleucine metabolism | 87.5 | 7 of 8 | ||
| 66794 | gluconeogenesis | 87.5 | 7 of 8 | ||
| 66794 | flavin biosynthesis | 86.67 | 13 of 15 | ||
| 66794 | ubiquinone biosynthesis | 85.71 | 6 of 7 | ||
| 66794 | reductive acetyl coenzyme A pathway | 85.71 | 6 of 7 | ||
| 66794 | photosynthesis | 85.71 | 12 of 14 | ||
| 66794 | heme metabolism | 85.71 | 12 of 14 | ||
| 66794 | vitamin B1 metabolism | 84.62 | 11 of 13 | ||
| 66794 | leucine metabolism | 84.62 | 11 of 13 | ||
| 66794 | urea cycle | 84.62 | 11 of 13 | ||
| 66794 | alanine metabolism | 82.76 | 24 of 29 | ||
| 66794 | glutamate and glutamine metabolism | 82.14 | 23 of 28 | ||
| 66794 | metabolism of disaccharids | 81.82 | 9 of 11 | ||
| 66794 | purine metabolism | 80.85 | 76 of 94 | ||
| 66794 | peptidoglycan biosynthesis | 80 | 12 of 15 | ||
| 66794 | propionate fermentation | 80 | 8 of 10 | ||
| 66794 | 3-phenylpropionate degradation | 80 | 12 of 15 | ||
| 66794 | gallate degradation | 80 | 4 of 5 | ||
| 66794 | 3-chlorocatechol degradation | 80 | 4 of 5 | ||
| 66794 | factor 420 biosynthesis | 80 | 4 of 5 | ||
| 66794 | glycogen metabolism | 80 | 4 of 5 | ||
| 66794 | ethylmalonyl-CoA pathway | 80 | 4 of 5 | ||
| 66794 | vitamin B12 metabolism | 79.41 | 27 of 34 | ||
| 66794 | tryptophan metabolism | 78.95 | 30 of 38 | ||
| 66794 | citric acid cycle | 78.57 | 11 of 14 | ||
| 66794 | glutathione metabolism | 78.57 | 11 of 14 | ||
| 66794 | allantoin degradation | 77.78 | 7 of 9 | ||
| 66794 | glycolysis | 76.47 | 13 of 17 | ||
| 66794 | histidine metabolism | 75.86 | 22 of 29 | ||
| 66794 | 6-hydroxymethyl-dihydropterin diphosphate biosynthesis | 75 | 6 of 8 | ||
| 66794 | glycogen biosynthesis | 75 | 3 of 4 | ||
| 66794 | butanoate fermentation | 75 | 3 of 4 | ||
| 66794 | phenol degradation | 75 | 15 of 20 | ||
| 66794 | lipid metabolism | 74.19 | 23 of 31 | ||
| 66794 | lysine metabolism | 73.81 | 31 of 42 | ||
| 66794 | non-pathway related | 73.68 | 28 of 38 | ||
| 66794 | pyrimidine metabolism | 73.33 | 33 of 45 | ||
| 66794 | isoprenoid biosynthesis | 73.08 | 19 of 26 | ||
| 66794 | carotenoid biosynthesis | 72.73 | 16 of 22 | ||
| 66794 | d-xylose degradation | 72.73 | 8 of 11 | ||
| 66794 | tetrahydrofolate metabolism | 71.43 | 10 of 14 | ||
| 66794 | arginine metabolism | 70.83 | 17 of 24 | ||
| 66794 | oxidative phosphorylation | 70.33 | 64 of 91 | ||
| 66794 | methionine metabolism | 69.23 | 18 of 26 | ||
| 66794 | L-lactaldehyde degradation | 66.67 | 2 of 3 | ||
| 66794 | (5R)-carbapenem carboxylate biosynthesis | 66.67 | 2 of 3 | ||
| 66794 | octane oxidation | 66.67 | 2 of 3 | ||
| 66794 | acetyl CoA biosynthesis | 66.67 | 2 of 3 | ||
| 66794 | enterobactin biosynthesis | 66.67 | 2 of 3 | ||
| 66794 | cysteine metabolism | 66.67 | 12 of 18 | ||
| 66794 | acetoin degradation | 66.67 | 2 of 3 | ||
| 66794 | degradation of aromatic, nitrogen containing compounds | 66.67 | 8 of 12 | ||
| 66794 | polyamine pathway | 65.22 | 15 of 23 | ||
| 66794 | tyrosine metabolism | 64.29 | 9 of 14 | ||
| 66794 | carnitine metabolism | 62.5 | 5 of 8 | ||
| 66794 | degradation of sugar alcohols | 62.5 | 10 of 16 | ||
| 66794 | dTDPLrhamnose biosynthesis | 62.5 | 5 of 8 | ||
| 66794 | sulfate reduction | 61.54 | 8 of 13 | ||
| 66794 | degradation of hexoses | 61.11 | 11 of 18 | ||
| 66794 | degradation of pentoses | 60.71 | 17 of 28 | ||
| 66794 | myo-inositol biosynthesis | 60 | 6 of 10 | ||
| 66794 | arachidonate biosynthesis | 60 | 3 of 5 | ||
| 66794 | 4-hydroxyphenylacetate degradation | 60 | 6 of 10 | ||
| 66794 | metabolism of amino sugars and derivatives | 60 | 3 of 5 | ||
| 66794 | lipoate biosynthesis | 60 | 3 of 5 | ||
| 66794 | ascorbate metabolism | 59.09 | 13 of 22 | ||
| 66794 | propanol degradation | 57.14 | 4 of 7 | ||
| 66794 | androgen and estrogen metabolism | 56.25 | 9 of 16 | ||
| 66794 | daunorubicin biosynthesis | 55.56 | 5 of 9 | ||
| 66794 | 4-hydroxymandelate degradation | 55.56 | 5 of 9 | ||
| 66794 | lipid A biosynthesis | 55.56 | 5 of 9 | ||
| 66794 | nitrate assimilation | 55.56 | 5 of 9 | ||
| 66794 | phenylpropanoid biosynthesis | 53.85 | 7 of 13 | ||
| 66794 | degradation of sugar acids | 52 | 13 of 25 | ||
| 66794 | mannosylglycerate biosynthesis | 50 | 1 of 2 | ||
| 66794 | toluene degradation | 50 | 2 of 4 | ||
| 66794 | pantothenate biosynthesis | 50 | 3 of 6 | ||
| 66794 | ribulose monophosphate pathway | 50 | 1 of 2 | ||
| 66794 | sulfopterin metabolism | 50 | 2 of 4 | ||
| 66794 | vitamin E metabolism | 50 | 2 of 4 | ||
| 66794 | phenylmercury acetate degradation | 50 | 1 of 2 | ||
| 66794 | glycine metabolism | 50 | 5 of 10 | ||
| 66794 | methanogenesis from CO2 | 50 | 6 of 12 | ||
| 66794 | catecholamine biosynthesis | 50 | 2 of 4 | ||
| 66794 | grixazone biosynthesis | 50 | 1 of 2 | ||
| 66794 | coenzyme M biosynthesis | 50 | 5 of 10 | ||
| 66794 | CMP-KDO biosynthesis | 50 | 2 of 4 | ||
| 66794 | cyclohexanol degradation | 50 | 2 of 4 | ||
| 66794 | selenocysteine biosynthesis | 50 | 3 of 6 | ||
| 66794 | bile acid biosynthesis, neutral pathway | 47.06 | 8 of 17 | ||
| 66794 | vitamin B6 metabolism | 45.45 | 5 of 11 | ||
| 66794 | benzoyl-CoA degradation | 42.86 | 3 of 7 | ||
| 66794 | aclacinomycin biosynthesis | 42.86 | 3 of 7 | ||
| 66794 | vitamin K metabolism | 40 | 2 of 5 | ||
| 66794 | bacilysin biosynthesis | 40 | 2 of 5 | ||
| 66794 | arachidonic acid metabolism | 38.89 | 7 of 18 | ||
| 66794 | cholesterol biosynthesis | 36.36 | 4 of 11 | ||
| 66794 | IAA biosynthesis | 33.33 | 1 of 3 | ||
| 66794 | sphingosine metabolism | 33.33 | 2 of 6 | ||
| 66794 | methane metabolism | 33.33 | 1 of 3 | ||
| 66794 | sulfoquinovose degradation | 33.33 | 1 of 3 | ||
| 66794 | phosphatidylethanolamine bioynthesis | 30.77 | 4 of 13 | ||
| 66794 | mevalonate metabolism | 28.57 | 2 of 7 | ||
| 66794 | dolichyl-diphosphooligosaccharide biosynthesis | 27.27 | 3 of 11 | ||
| 66794 | lactate fermentation | 25 | 1 of 4 | ||
| 66794 | alginate biosynthesis | 25 | 1 of 4 | ||
| 66794 | chlorophyll metabolism | 22.22 | 4 of 18 |
| @ref | Description | Assembly level | INSDC accession | BV-BRC accession | IMG accession | NCBI tax ID | Score | |
|---|---|---|---|---|---|---|---|---|
| 66792 | Kitasatospora aureofaciens CCM 3239 | complete | 1894 | 99.78 | ||||
| 66792 | Kitasatospora aureofaciens CCM 3239 | complete | 1894 | 99.04 | ||||
| 66792 | ASM280384v1 assembly for Streptomyces lavendulae subsp. lavendulae CCM 3239 | complete | 58340 | 98.23 | ||||
| 66792 | Kitasatospora aureofaciens CCM 3239 | complete | 1894 | 79.15 | ||||
| 66792 | ASM1749864v1 assembly for Streptomyces lividans TK24-YQS040 | complete | 1916 | 74.8 | ||||
| 67770 | ASM118895v3 assembly for Kitasatospora aureofaciens ATCC 10762 | contig | 1894 | 55.75 | ||||
| 66792 | Kitasatospora aureofaciens CCM 3239 | complete | 1894 | 40.96 | ||||
| 67770 | ASM71917v1 assembly for Kitasatospora aureofaciens NRRL B-2657 | contig | 1894 | 21.76 | ||||
| 67770 | ASM72084v1 assembly for Kitasatospora aureofaciens NRRL B-2183 | contig | 1894 | 20.55 | ||||
| 67770 | ASM97851v1 assembly for Kitasatospora aureofaciens NRRL 2209 | contig | 1894 |
| @ref | Description | Accession | Length | Database | NCBI tax ID | |
|---|---|---|---|---|---|---|
| 20218 | Streptomyces aureofaciens strain IMET 43577 16S ribosomal RNA gene, partial sequence | AY289116 | 1509 | 1894 | ||
| 20218 | Streptomyces bobili gene for 16S rRNA | AB045876 | 1483 | 67280 | ||
| 20218 | Streptomyces aureofaciens gene for 16S rRNA | AB045881 | 1473 | 1894 | ||
| 20218 | Streptomyces aureofaciens gene for 16S ribosomal RNA, partial sequence, strain: JCM 4624 | D44273 | 120 | 1894 | ||
| 20218 | Streptomyces aureofaciens gene for 16S rRNA, partial sequence, strain: NBRC 12594 | AB184105 | 1468 | 1894 | ||
| 20218 | Streptomyces aureofaciens gene for 16S rRNA, partial sequence, strain: NBRC 12843 | AB184189 | 1460 | 1894 | ||
| 20218 | Streptomyces aureofaciens gene for 16S rRNA, partial sequence, strain: NBRC 3712 | AB184783 | 1468 | 1894 | ||
| 20218 | Streptomyces aureofaciens 16S rRNA gene, strain NRRL 2209 | Y15504 | 1469 | 1894 | ||
| 9330 | Streptomyces aureofaciens 16S ribosomal RNA gene, partial sequence | AY207608 | 1512 | 1894 |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125439 | spore_formation | BacteriaNetⓘ | yes | 93.20 | no |
| 125439 | motility | BacteriaNetⓘ | no | 87.90 | no |
| 125439 | gram_stain | BacteriaNetⓘ | positive | 99.50 | no |
| 125439 | oxygen_tolerance | BacteriaNetⓘ | obligate aerobe | 98.50 | no |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125438 | gram-positive | gram-positiveⓘ | yes | 89.17 | no |
| 125438 | anaerobic | anaerobicⓘ | no | 96.36 | no |
| 125438 | aerobic | aerobicⓘ | yes | 89.96 | yes |
| 125438 | spore-forming | spore-formingⓘ | yes | 90.78 | yes |
| 125438 | thermophilic | thermophileⓘ | no | 96.50 | no |
| 125438 | flagellated | motile2+ⓘ | no | 87.60 | no |
| Topic | Title | Authors | Journal | DOI | Year | |
|---|---|---|---|---|---|---|
| Recent Developments and Challenges in the Enzymatic Formation of Nitrogen-Nitrogen Bonds. | Angeli C, Atienza-Sanz S, Schroder S, Hein A, Li Y, Argyrou A, Osipyan A, Terholsen H, Schmidt S. | ACS Catal | 10.1021/acscatal.4c05268 | 2025 | ||
| Comparative genomics of Streptomyces avermitilis, Streptomyces cattleya, Streptomyces maritimus and Kitasatospora aureofaciens using a Streptomyces coelicolor microarray system. | Hsiao NH, Kirby R. | Antonie Van Leeuwenhoek | 10.1007/s10482-007-9175-1 | 2008 | ||
| Enzymology | Crystal structures and low-affinity complex formation of halogenase CtcP and FAD reductase CtcQ from the chlortetracycline biosynthetic pathway. | Hou C, Garneau-Tsodikova S, Tsodikov OV. | Biosci Rep | 10.1042/bsr20253185 | 2025 | |
| Metabolism | Identification and characterization of an indigoidine-like gene for a blue pigment biosynthesis in Streptomyces aureofaciens CCM 3239. | Novakova R, Odnogova Z, Kutas P, Feckova L, Kormanec J | Folia Microbiol (Praha) | 10.1007/s12223-010-0018-5 | 2010 | |
| Enzymology | Chloroperoxidase from Streptomyces lividans: isolation and characterization of the enzyme and the corresponding gene. | Bantleon R, Altenbuchner J, van Pee KH | J Bacteriol | 10.1128/jb.176.8.2339-2347.1994 | 1994 | |
| Enzymology | Cloning of a second non-haem bromoperoxidase gene from Streptomyces aureofaciens ATCC 10762: sequence analysis, expression in Streptomyces lividans and enzyme purification. | Pelletier I, Pfeifer O, Altenbuchner J, van Pee KH | Microbiology (Reading) | 10.1099/00221287-140-3-509 | 1994 | |
| A Structural Analysis of the Angucycline-Like Antibiotic Auricin from Streptomyces lavendulae Subsp. Lavendulae CCM 3239 Revealed Its High Similarity to Griseusins. | Matulova M, Feckova L, Novakova R, Mingyar E, Csolleiova D, Zduriencikova M, Sedlak J, Patoprsty V, Sasinkova V, Uhliarikova I, Sevcikova B, Rezuchova B, Homerova D, Kormanec J | Antibiotics (Basel) | 10.3390/antibiotics8030102 | 2019 | ||
| Metabolism | Heterologous production of chlortetracycline in an industrial grade Streptomyces rimosus host. | Wang X, Yin S, Bai J, Liu Y, Fan K, Wang H, Yuan F, Zhao B, Li Z, Wang W | Appl Microbiol Biotechnol | 10.1007/s00253-019-09970-1 | 2019 | |
| Pathogenicity | Rapid identification of Streptomyces tetracycline producers by MALDI-TOF mass spectrometry. | Hleba L, Charousova I, Cisarova M, Kovacik A, Kormanec J, Medo J, Bozik M, Javorekova S | J Environ Sci Health A Tox Hazard Subst Environ Eng | 10.1080/10934529.2018.1474581 | 2018 | |
| Genetics | Complete Genome Sequence of Streptomyces lavendulae subsp. lavendulae CCM 3239 (Formerly "Streptomyces aureofaciens CCM 3239"), a Producer of the Angucycline-Type Antibiotic Auricin. | Busche T, Novakova R, Al'Dilaimi A, Homerova D, Feckova L, Rezuchova B, Mingyar E, Csolleiova D, Bekeova C, Winkler A, Sevcikova B, Kalinowski J, Kormanec J, Ruckert C | Genome Announc | 10.1128/genomeA.00103-18 | 2018 | |
| Transcriptome | Unusual features of the large linear plasmid pSA3239 from Streptomyces aureofaciens CCM 3239. | Mingyar E, Novakova R, Knirschova R, Feckova L, Bekeova C, Kormanec J | Gene | 10.1016/j.gene.2017.11.046 | 2017 | |
| Metabolism | Characterisation of the genes involved in the biosynthesis and attachment of the aminodeoxysugar D-forosamine in the auricin gene cluster of Streptomyces aureofaciens CCM3239. | Bekeova C, Rehakova A, Feckova L, Vlckova S, Novakova R, Mingyar E, Kormanec J | Appl Microbiol Biotechnol | 10.1007/s00253-015-7214-9 | 2015 | |
| Metabolism | Utilization of a reporter system based on the blue pigment indigoidine biosynthetic gene bpsA for detection of promoter activity and deletion of genes in Streptomyces. | Knirschova R, Novakova R, Mingyar E, Bekeova C, Homerova D, Kormanec J | J Microbiol Methods | 10.1016/j.mimet.2015.03.017 | 2015 | |
| Metabolism | A gamma-butyrolactone autoregulator-receptor system involved in the regulation of auricin production in Streptomyces aureofaciens CCM 3239. | Mingyar E, Feckova L, Novakova R, Bekeova C, Kormanec J | Appl Microbiol Biotechnol | 10.1007/s00253-014-6057-0 | 2014 | |
| Metabolism | Intriguing properties of the angucycline antibiotic auricin and complex regulation of its biosynthesis. | Kormanec J, Novakova R, Mingyar E, Feckova L | Appl Microbiol Biotechnol | 10.1007/s00253-013-5373-0 | 2013 | |
| Metabolism | A gene determining a new member of the SARP family contributes to transcription of genes for the synthesis of the angucycline polyketide auricin in Streptomyces aureofaciens CCM 3239. | Rehakova A, Novakova R, Feckova L, Mingyar E, Kormanec J | FEMS Microbiol Lett | 10.1111/1574-6968.12200 | 2013 | |
| Metabolism | The gene cluster aur1 for the angucycline antibiotic auricin is located on a large linear plasmid pSA3239 in Streptomyces aureofaciens CCM 3239. | Novakova R, Knirschova R, Farkasovsky M, Feckova L, Rehakova A, Mingyar E, Kormanec J | FEMS Microbiol Lett | 10.1111/1574-6968.12095 | 2013 | |
| Metabolism | Strict control of auricin production in Streptomyces aureofaciens CCM 3239 involves a feedback mechanism. | Kutas P, Feckova L, Rehakova A, Novakova R, Homerova D, Mingyar E, Rezuchova B, Sevcikova B, Kormanec J | Appl Microbiol Biotechnol | 10.1007/s00253-012-4505-2 | 2012 | |
| Metabolism | Genetic manipulation of pathway regulation for overproduction of angucycline-like antibiotic auricin in Streptomyces aureofaciens CCM 3239. | Novakova R, Rehakova A, Feckova L, Kutas P, Knischova R, Kormanec J | Folia Microbiol (Praha) | 10.1007/s12223-011-0033-1 | 2011 | |
| Metabolism | The role of two SARP family transcriptional regulators in regulation of the auricin gene cluster in Streptomyces aureofaciens CCM 3239. | Novakova R, Rehakova A, Kutas P, Feckova L, Kormanec J | Microbiology (Reading) | 10.1099/mic.0.047795-0 | 2011 | |
| Metabolism | The role of the TetR-family transcriptional regulator Aur1R in negative regulation of the auricin gene cluster in Streptomyces aureofaciens CCM 3239. | Novakova R, Kutas P, Feckova L, Kormanec J | Microbiology (Reading) | 10.1099/mic.0.037895-0 | 2010 | |
| Metabolism | Characterization of a regulatory gene essential for the production of the angucycline-like polyketide antibiotic auricin in Streptomyces aureofaciens CCM 3239. | Novakova R, Homerova D, Feckova L, Kormanec J | Microbiology (Reading) | 10.1099/mic.0.28019-0 | 2005 | |
| Metabolism | PHB synthase from Streptomyces aureofaciens NRRL 2209. | Ramachander TV, Rawal SK | FEMS Microbiol Lett | 10.1016/j.femsle.2004.10.034 | 2005 | |
| Enzymology | Cloning and characterization of a new polyketide synthase gene cluster in Streptomyces aureofaciens CCM 3239. | Novakova R, Bistakova J, Homerova D, Rezuchova B, Feckova L, Kormanec J | DNA Seq | 10.1080/10425170410001710556 | 2004 | |
| Metabolism | Characterization of the polyketide spore pigment cluster whiESa in Streptomyces aureofaciens CCM3239. | Novakova R, Bistakova J, Kormanec J | Arch Microbiol | 10.1007/s00203-004-0720-2 | 2004 | |
| Metabolism | Poly(3-hydroxybutyrate) (PHB) synthesis by recombinant Escherichia coli harbouring Streptomyces aureofaciens PHB biosynthesis genes: effect of various carbon and nitrogen sources. | Mahishi LH, Tripathi G, Rawal SK | Microbiol Res | 10.1078/0944-5013-00161 | 2003 | |
| Metabolism | Synthesis of PHB by recombinant E. coli harboring an approximately 5 kb genomic DNA fragment from Streptomyces aureofaciens NRRL 2209. | Ramachander TV, Rohini D, Belhekar A, Rawal SK | Int J Biol Macromol | 10.1016/s0141-8130(02)00068-5 | 2002 | |
| Enzymology | Cloning and characterization of a polyketide synthase gene cluster involved in biosynthesis of a proposed angucycline-like polyketide auricin in Streptomyces aureofaciens CCM 3239. | Novakova R, Bistakova J, Homerova D, Rezuchova B, Kormanec J | Gene | 10.1016/s0378-1119(02)00889-2 | 2002 | |
| Genetics | Use of degenerate primers and touchdown PCR to amplify a halogenase gene fragment from Streptomyces venezuelae ISP5230. | Piraee M, Vining LC | J Ind Microbiol Biotechnol | 10.1038/sj.jim.7000263 | 2002 | |
| Enzymology | Purification, crystallization and preliminary X-ray analysis of two crystal forms of ribonuclease Sa3. | Hlinkova V, Urbanikova L, Krajcikova D, Sevcik J | Acta Crystallogr D Biol Crystallogr | 10.1107/s0907444901003456 | 2001 | |
| Metabolism | Iron deficiency-induced tetracycline production in submerged cultures by Streptomyces aureofaciens. | Bechet M, Blondeau R | J Appl Microbiol | 10.1046/j.1365-2672.1998.00428.x | 1998 | |
| Enzymology | The metal-ion-free oxidoreductase from Streptomyces aureofaciens has an alpha/beta hydrolase fold. | Hecht HJ, Sobek H, Haag T, Pfeifer O, van Pee KH | Nat Struct Biol | 10.1038/nsb0894-532 | 1994 | |
| Enzymology | Cloning and sequencing of the gene encoding a ribonuclease from Streptomyces aureofaciens CCM3239. | Homerova D, Hollanderova Z, Kormanec J, Sevcik J | Gene | 10.1016/0378-1119(92)90082-z | 1992 | |
| Enzymology | Molecular cloning and sequencing of a non-haem bromoperoxidase gene from Streptomyces aureofaciens ATCC 10762. | Pfeifer O, Pelletier I, Altenbuchner J, van Pee KH | J Gen Microbiol | 10.1099/00221287-138-6-1123 | 1992 | |
| Enzymology | Purification, characterization and comparison of two non-haem bromoperoxidases from Streptomyces aureofaciens ATCC 10762. | Weng M, Pfeifer O, Krauss S, Lingens F, van Pee KH | J Gen Microbiol | 10.1099/00221287-137-11-2539 | 1991 | |
| Enzymology | Crystallization and preliminary X-ray data of bromoperoxidase from Streptomyces aureofaciens ATCC 10762. | Sobek H, Haag T, Pfeifer O, Schomburg D, Lingens F, van Pee KH | J Mol Biol | 10.1016/0022-2836(91)80199-5 | 1991 | |
| Metabolism | Properties of apyrase and inorganic pyrophosphatase in Streptomyces aureofaciens. | Curdova E, Jechova V, Hostalek Z | Folia Microbiol (Praha) | 10.1007/BF02877394 | 1982 | |
| Phylogeny | Kitasatospora cathayae sp. nov., a novel endophytic actinomycete isolated from the leaves of Cathaya argyrophylla. | Zheng Y, Mo P, Li J, Zhou Z, Huang K, Luo Y, Xie P, Wang Y. | Int J Syst Evol Microbiol | 10.1099/ijsem.0.006406 | 2024 |
| #9330 | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 40127 |
| #19405 | Wink, J.: Compendium of Actinobacteria. HZI-Helmholtz-Centre for Infection Research, Braunschweig . |
| #20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 ) |
| #20218 | Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 ) |
| #37599 | ; Curators of the CIP; |
| #66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) . |
| #66794 | Antje Chang, Lisa Jeske, Sandra Ulbrich, Julia Hofmann, Julia Koblitz, Ida Schomburg, Meina Neumann-Schaal, Dieter Jahn, Dietmar Schomburg: BRENDA, the ELIXIR core data resource in 2021: new developments and updates. Nucleic Acids Res. 49: D498 - D508 2020 ( DOI 10.1093/nar/gkaa1025 , PubMed 33211880 ) |
| #67770 | Japan Collection of Microorganism (JCM) ; Curators of the JCM; |
| #68368 | Automatically annotated from API 20E . |
| #68379 | Automatically annotated from API Coryne . |
| #68382 | Automatically annotated from API zym . |
| #69247 | Wink, J.: Compendium of Actinobacteria. HZI-Helmholtz-Centre for Infection Research, Braunschweig . |
| #116569 | Collection of Institut Pasteur ; Curators of the CIP; CIP 57.11 |
| #125438 | Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 ) |
| #125439 | Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 . |
| #126262 | A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 ) |
You found an error in BacDive? Please tell us about it!
Note that changes will be reviewed and judged. If your changes are legitimate, changes will occur within the next BacDive update. Only proposed changes supported by the according reference will be reviewed. The BacDive team reserves the right to reject proposed changes.
Successfully sent
If you want to cite this particular strain cite the following doi:
https://doi.org/10.13145/bacdive15015.20251217.10
When using BacDive for research please cite the following paper
BacDive in 2025: the core database for prokaryotic strain data