Streptomyces aurantiacus DSM 40412 is a bacterium of the family Streptomycetaceae.
genome sequence 16S sequence Bacteria| @ref 20215 |
|
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| Domain Bacteria |
| Phylum Actinomycetota |
| Class Actinomycetes |
| Order Kitasatosporales |
| Family Streptomycetaceae |
| Genus Streptomyces |
| Species Streptomyces aurantiacus |
| Full scientific name Streptomyces aurantiacus (Rossi Doria 1891) Waksman 1953 (Approved Lists 1980) |
| Synonyms (5) |
| @ref | Name | Growth | Medium link | Composition | |
|---|---|---|---|---|---|
| 9524 | GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) | Medium recipe at MediaDive | Name: GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) Composition: Agar 18.0 g/l Malt extract 10.0 g/l Yeast extract 4.0 g/l Glucose 4.0 g/l CaCO3 2.0 g/l Distilled water |
| @ref | Spore formation | Confidence | |
|---|---|---|---|
| 125438 | 94.292 |
| @ref | Chebi-ID | Metabolite | Utilization activity | Kind of utilization tested | |
|---|---|---|---|---|---|
| 68368 | 29016 ChEBI | arginine | - | hydrolysis | from API 20E |
| 68368 | 16947 ChEBI | citrate | - | assimilation | from API 20E |
| 68368 | 5291 ChEBI | gelatin | + | hydrolysis | from API 20E |
| 68368 | 25094 ChEBI | lysine | - | degradation | from API 20E |
| 68368 | 18257 ChEBI | ornithine | - | degradation | from API 20E |
| 68368 | 27897 ChEBI | tryptophan | - | energy source | from API 20E |
| 68368 | 16199 ChEBI | urea | + | hydrolysis | from API 20E |
| @ref | Value | Activity | Ec | |
|---|---|---|---|---|
| 68368 | arginine dihydrolase | - | 3.5.3.6 | from API 20E |
| 68368 | beta-galactosidase | - | 3.2.1.23 | from API 20E |
| 68368 | gelatinase | + | from API 20E | |
| 68368 | lysine decarboxylase | - | 4.1.1.18 | from API 20E |
| 68368 | ornithine decarboxylase | - | 4.1.1.17 | from API 20E |
| 68368 | tryptophan deaminase | - | 4.1.99.1 | from API 20E |
| 68368 | urease | + | 3.5.1.5 | from API 20E |
Global distribution of 16S sequence AJ781383 (>99% sequence identity) for Streptomyces from Microbeatlas ![]()
| @ref | Description | Assembly level | INSDC accession | IMG accession | NCBI tax ID | |
|---|---|---|---|---|---|---|
| 67770 | ASM141833v1 assembly for Streptomyces aurantiacus NRRL ISP-5412 | scaffold | 47760 |
| @ref | Description | Accession | Length | Database | NCBI tax ID | |
|---|---|---|---|---|---|---|
| 20218 | Streptomyces aurantiacus gene for 16S ribosomal RNA, partial sequence, strain: JCM 4453 | D44150 | 120 | 47760 | ||
| 20218 | Streptomyces aurantiacus 16S rRNA gene, type strain LMG 19358 | AJ781383 | 1482 | 47760 | ||
| 20218 | Streptomyces aurantiacus gene for 16S rRNA, partial sequence, strain: NBRC 13017 | AB184259 | 1473 | 47760 |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125438 | gram-positive | gram-positiveⓘ | yes | 86.19 | no |
| 125438 | anaerobic | anaerobicⓘ | no | 96.80 | no |
| 125438 | aerobic | aerobicⓘ | yes | 88.13 | no |
| 125438 | spore-forming | spore-formingⓘ | yes | 94.29 | no |
| 125438 | thermophilic | thermophileⓘ | no | 94.50 | yes |
| 125438 | flagellated | motile2+ⓘ | no | 88.50 | no |
| Topic | Title | Authors | Journal | DOI | Year | |
|---|---|---|---|---|---|---|
| Prevalence and Correlates of Phenazine Resistance in Culturable Bacteria from a Dryland Wheat Field. | Perry EK, Newman DK. | Appl Environ Microbiol | 10.1128/aem.02320-21 | 2022 | ||
| Metabolism | Elucidation of the Streptoazine Biosynthetic Pathway in Streptomyces aurantiacus Reveals the Presence of a Promiscuous Prenyltransferase/Cyclase. | Liu J, Yang Y, Harken L, Li SM. | J Nat Prod | 10.1021/acs.jnatprod.1c00844 | 2021 | |
| Phylogeny | Genomic insight into the Streptomyces aurantiacus clade: reclassification of Streptomyces ederensis as a later heterotypic synonym of Streptomyces umbrinus and Streptomyces glomeroaurantiacus as a later heterotypic synonym of Streptomyces aurantiacus. | Saygin H. | Int J Syst Evol Microbiol | 10.1099/ijsem.0.004797 | 2021 | |
| Solid-Phase-Based Total Synthesis and Stereochemical Assignment of the Cryptic Natural Product Aurantizolicin. | Oberheide A, Pflanze S, Stallforth P, Arndt HD. | Org Lett | 10.1021/acs.orglett.8b03940 | 2019 | ||
| Pathogenicity | Aurantimycin resistance genes contribute to survival of Listeria monocytogenes during life in the environment. | Hauf S, Herrmann J, Miethke M, Gibhardt J, Commichau FM, Muller R, Fuchs S, Halbedel S. | Mol Microbiol | 10.1111/mmi.14205 | 2019 | |
| Genetics | The Discovery of Weddellamycin, a Tricyclic Polyene Macrolactam Antibiotic from an Antarctic Deep-Sea-Derived Streptomyces sp. DSS69, by Heterologous Expression. | Chen L, Liu K, Hong J, Cui Z, He W, Wang Y, Deng Z, Tao M. | Mar Drugs | 10.3390/md22040189 | 2024 | |
| Marine actinobacteria metabolites: unlocking new treatments for acne vulgaris. | De La Hoz-Romo MC, Diaz L, Gomez-Leon J, Quintero M, Villamil L. | Front Microbiol | 10.3389/fmicb.2024.1501951 | 2024 | ||
| Metabolism | Interaction studies of resistomycin from Streptomyces aurantiacus AAA5 with calf thymus DNA and bovine serum albumin. | Vijayabharathi R, Sathyadevi P, Krishnamoorthy P, Senthilraja D, Brunthadevi P, Sathyabama S, Priyadarisini VB. | Spectrochim Acta A Mol Biomol Spectrosc | 10.1016/j.saa.2011.12.072 | 2012 | |
| Metabolism | Assessment of resistomycin, as an anticancer compound isolated and characterized from Streptomyces aurantiacus AAA5. | Vijayabharathi R, Bruheim P, Andreassen T, Raja DS, Devi PB, Sathyabama S, Priyadarisini VB. | J Microbiol | 10.1007/s12275-011-1260-5 | 2011 | |
| ClpP2 proteasomes and SpxA1 determine Listeria monocytogenes tartrolon B hyper-resistance. | Engelgeh T, Wamp S, Rothe P, Herrmann J, Fischer MA, Muller R, Halbedel S. | PLoS Genet | 10.1371/journal.pgen.1011621 | 2025 | ||
| Pathogenicity | Elements in the LftR Repressor Operator Interface Contributing to Regulation of Aurantimycin Resistance in Listeria monocytogenes. | Hauf S, Engelgeh T, Halbedel S. | J Bacteriol | 10.1128/jb.00503-20 | 2021 | |
| Convergent evolution of bacterial ceramide synthesis. | Stankeviciute G, Tang P, Ashley B, Chamberlain JD, Hansen MEB, Coleman A, D'Emilia R, Fu L, Mohan EC, Nguyen H, Guan Z, Campopiano DJ, Klein EA. | Nat Chem Biol | 10.1038/s41589-021-00948-7 | 2022 | ||
| Enzymology | Selection of the Optimal L-asparaginase II Against Acute Lymphoblastic Leukemia: An In Silico Approach. | Baral A, Gorkhali R, Basnet A, Koirala S, Bhattarai HK. | JMIRx Med | 10.2196/29844 | 2021 | |
| Genetics | Exploration of Diverse Secondary Metabolites From Streptomyces sp. YINM00001, Using Genome Mining and One Strain Many Compounds Approach. | Liu T, Ren Z, Chunyu WX, Li GD, Chen X, Zhang ZT, Sun HB, Wang M, Xie TP, Wang M, Chen JY, Zhou H, Ding ZT, Yin M. | Front Microbiol | 10.3389/fmicb.2022.831174 | 2022 | |
| Genetics | Evaluation of the anticarcinogenic potential of the endophyte, Streptomyces sp. LRE541 isolated from Lilium davidii var. unicolor (Hoog) Cotton. | Ma A, Jiang K, Chen B, Chen S, Qi X, Lu H, Liu J, Zhou X, Gao T, Li J, Zhao C. | Microb Cell Fact | 10.1186/s12934-021-01706-z | 2021 | |
| Streptomyces artemisiae MCCB 248 isolated from Arctic fjord sediments has unique PKS and NRPS biosynthetic genes and produces potential new anticancer natural products. | Dhaneesha M, Benjamin Naman C, Krishnan KP, Sinha RK, Jayesh P, Joseph V, Bright Singh IS, Gerwick WH, Sajeevan TP. | 3 Biotech | 10.1007/s13205-017-0610-3 | 2017 | ||
| Phylogenetic and Physiological Diversity of Cultivable Actinomycetes Isolated From Alpine Habitats on the Qinghai-Tibetan Plateau. | Ma A, Zhang X, Jiang K, Zhao C, Liu J, Wu M, Wang Y, Wang M, Li J, Xu S. | Front Microbiol | 10.3389/fmicb.2020.555351 | 2020 | ||
| Molecular characterization and its antioxidant activity of a newly isolated Streptomyces coelicoflavus BC 01 from mangrove soil. | Raghava Rao KV, Raghava Rao T. | J Young Pharm | 10.1016/j.jyp.2013.10.002 | 2013 | ||
| Phylogeny | A taxonomic study of the genus Streptomyces by analysis of ribosomal protein AT-L30. | Ochi K. | Int J Syst Bacteriol | 10.1099/00207713-45-3-507 | 1995 | |
| Phylogeny | The search for synonyms among streptomycetes by using SDS-PAGE of whole-cell proteins. Emendation of the species Streptomyces aurantiacus, Streptomyces cacaoi subsp. cacaoi, Streptomyces caeruleus and Streptomyces violaceus. | Lanoot B, Vancanneyt M, Cleenwerck I, Wang L, Li W, Liu Z, Swings J | Int J Syst Evol Microbiol | 10.1099/00207713-52-3-823 | 2002 | |
| Phylogeny | Streptomyces liliifuscus sp. nov and an anti-ginger plague agent Streptomyces liliiviolaceus sp. nov, two novel species isolated from soil of Lilium lancifolium. | Li K, Man Y, Liu J, Liu Z, Ma H, Zhu H, Zhou Y, Zhang C, Zhou X | Int J Syst Evol Microbiol | 10.1099/ijsem.0.005340 | 2022 | |
| Phylogeny | Discovery of two new actinobacteria, Micromonospora palythoicola sp. nov. and Streptomyces poriticola sp. nov., isolated from marine invertebrates. | Kanchanasin P, Salahong T, Sripreechasak P, Suriyachadkun C, Harunari E, Igarashi Y, Tanasupawat S, Tawinwung S, Vimolmangkang S, Chaotham C, Phongsopitanun W. | Sci Rep | 10.1038/s41598-024-73040-4 | 2024 | |
| Genetics | Discovery and biosynthetic assessment of 'Streptomyces ortus' sp. nov. isolated from a deep-sea sponge. | Williams SE, Back CR, Best E, Mantell J, Stach JEM, Williams TA, Race PR, Curnow P. | Microb Genom | 10.1099/mgen.0.000996 | 2023 | |
| Phylogeny | Two new species of the genus Streptomyces: Streptomyces camponoti sp. nov. and Streptomyces cuticulae sp. nov. isolated from the cuticle of Camponotus japonicus Mayr. | Piao C, Zheng W, Li Y, Liu C, Jin L, Song W, Yan K, Wang X, Xiang W | Arch Microbiol | 10.1007/s00203-017-1353-6 | 2017 |
| #9524 | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 40412 |
| #18589 | Wink, J.: Compendium of Actinobacteria. HZI-Helmholtz-Centre for Infection Research, Braunschweig . |
| #20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 ) |
| #20218 | Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 ) |
| #67770 | Japan Collection of Microorganism (JCM) ; Curators of the JCM; |
| #68368 | Automatically annotated from API 20E . |
| #69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta . |
| #125438 | Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 ) |
| #126262 | A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 ) |
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