Streptomyces albidoflavus 8110 | DSM 40001, ATCC 19736, CBS 474.68, DSM 41156, IFO 12751, IMRU 3782, ISP 5001, JCM 4196, JCM 4568, KCC S-0196, KCC S-0568, NBRC 12751, NRRL 2419, RIA 1016, SC 3069, BCRC 12206, CGMCC 4.1681, IMET 43077, LMG 8567, MTCC 1104, VKM Ac-732

Caption:

Medium 65 28°C

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Information on culture and growth conditions Culture and growth conditions

Culture medium

GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)

Culture medium growth

Medium recipe at MediaDive

Culture medium link

Culture medium composition

Culture medium

ISP 2

Culture medium growth

Culture medium composition

Culture medium

ISP 3

Culture medium growth

Culture medium composition

Culture medium

ISP 4

Culture medium growth

Culture medium composition

Culture medium

ISP 5

Culture medium growth

Culture medium composition

What are isolation sources categories?

		Temperature
[Ref.: #9206]	growth	28 °C
[Ref.: #18461]	optimum	30 °C
[Ref.: #67770]	growth	28 °C

[Ref.: #9206]	Temperature range	mesophilic
[Ref.: #18461]	Temperature range	mesophilic
[Ref.: #67770]	Temperature range	mesophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #69481]	Ability of spore formation	yes Confidence in %100
[Ref.: #69480]	Ability of spore formation	yes Confidence in %100

[Ref.: #9206]	Name of produced compound	ascosin B
[Ref.: #9206]	Name of produced compound	ascosin A
[Ref.: #20216]	Name of produced compound	Ascosin A
[Ref.: #20216]	Name of produced compound	Ascosin B

	Halophily	Salt	Tested relation		Salt conc.
[Ref.: #18461]		NaCl		maximum	5	%

[Ref.: #18461]	Name of tolerated compound	Lysozyme
[Ref.: #18461]	Tolerance percentage	0.1

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #18461]	arabinose ChEBI	+
[Ref.: #68368]	arginine ChEBI	-	hydrolysis	* from API 20E
[Ref.: #18461]	cellulose ChEBI	-
[Ref.: #68368]	citrate ChEBI	+	assimilation	* from API 20E
[Ref.: #18461]	fructose ChEBI	+
[Ref.: #68368]	gelatin ChEBI	+	hydrolysis	* from API 20E
[Ref.: #18461]	glucose ChEBI	+
[Ref.: #68368]	lysine ChEBI	-	degradation	* from API 20E
[Ref.: #18461]	mannitol ChEBI	+
[Ref.: #18461]	myo-inositol ChEBI	-
[Ref.: #68368]	ornithine ChEBI	-	degradation	* from API 20E
[Ref.: #18461]	raffinose ChEBI	-
[Ref.: #18461]	rhamnose ChEBI	-
[Ref.: #18461]	sucrose ChEBI	-
[Ref.: #68368]	tryptophan ChEBI	-	energy source	* from API 20E
[Ref.: #68368]	urea ChEBI	-	hydrolysis	* from API 20E
[Ref.: #18461]	xylose ChEBI	-
	Only first 10 entries are displayed. Click here to see all.

	Metabolite	Production
[Ref.: #67770]	ascosin	yes
[Ref.: #68368]	acetoin ChEBI	yes	* from API 20E
[Ref.: #68368]	hydrogen sulfide ChEBI	no	* from API 20E
[Ref.: #68368]	indole ChEBI	no	* from API 20E

	Physiological tests	Metabolite	Voges-Proskauer-test	Indole test
[Ref.: #68368]		acetoin ChEBI	+		* from API 20E
[Ref.: #68368]		indole ChEBI		-	* from API 20E

	Enzyme	Enzyme activity	EC number
[Ref.: #68368]	arginine dihydrolase	-	3.5.3.6	* from API 20E
[Ref.: #68368]	beta-galactosidase	-	3.2.1.23	* from API 20E
[Ref.: #68368]	gelatinase	+		* from API 20E
[Ref.: #68368]	lysine decarboxylase	-	4.1.1.18	* from API 20E
[Ref.: #68368]	ornithine decarboxylase	-	4.1.1.17	* from API 20E
[Ref.: #68368]	tryptophan deaminase	-	4.1.99.1	* from API 20E
[Ref.: #68368]	urease	-	3.5.1.5	* from API 20E

API® 20E:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	beta-GalactosidaseONPG	Arginine dihydrolaseADH (Arg)	Lysine decarboxylaseLDC (Lys)	Ornithine decarboxylaseODC	Citrate utilizationCIT	H2S productionH2S	Urease/urea hydrolysisURE	Tryptophan deaminaseTDA (Trp)	Indole productionIND	Acetoin production (Voges Proskauer test)VP	Gelatinase/gelatin hydrolysisGEL	Fermentation/oxidation of D-glucoseGLU	Fermentation/oxidation of D-mannitolMAN	Fermentation/oxidation of inositolINO	Fermentation/oxidation of sorbitolSor	Fermentation/oxidation of L-rhamnoseRHA	Fermentation/oxidation of sucroseSAC	Fermentation/oxidation of melibioseMEL	Fermentation/oxidation of amygdalinAMY	Fermentation/oxidation of L-arabinoseARA	Cytochrome oxidaseOX	Nitrite productionNO2	Reduction to N2N2	MotilityMOB	Growth on MacConkey mediumMAC	Oxidative catabolisation of D-glucoseOF-O	Fermentation of D-glucoseOF-F
[Ref.: #18461]	127	-	-	-	-	+	-	-	-	-	+	+	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #9206]	Sample type/isolated from	contaminated fungus plate

[Ref.: #67770]	Sample type/isolated from	Contaminated fungus plate
* marker position based on {}

Isolation sources categories

#Engineered	#Contamination	-
#Host	#Fungi	-

[Ref.: #69479]

Global distribution of 16S sequence Z76684 (>99% sequence identity) for Streptomyces from Microbeatlas

Aquatic Samples	5
Soil Samples	39
Animal Samples	85
Plant Samples
Total Samples	129

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #18461]	Biosafety level	1	German classification
[Ref.: #9206]	Biosafety level	1	Risk group (German classification) According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #9206]	Streptomyces canescens gene for 16S rRNA, partial sequence, strain: NBRC 12751	AB184117	1478	ENA	53445 tax ID
[Ref.: #20218]	S.canescens (DSM 40001T) 16S rRNA gene	Z76684	1476	ENA	53445 tax ID	*
[Ref.: #20218]	Streptomyces canescens gene for 16S ribosomal RNA, partial sequence, strain: JCM 4568	D44237	120	ENA	53445 tax ID	*

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Streptomyces albidoflavus CGMCC 4.1681	GCA_004195845	contig	GenBank	1886 tax ID
[Ref.: #66792]	Streptomyces albidoflavus strain CGMCC 4.1681	1886.43	wgs	PATRIC	1886 tax ID	*

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from GenomeNet Sporulation v. 1 based on: Streptomyces albidoflavus strain CGMCC 4.1681 PATRIC: 1886.43
[Ref.: #69481]	spore-forming	yes	100	no

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Streptomyces albidoflavus strain CGMCC 4.1681 PATRIC: 1886.43
[Ref.: #69480]	motile	no	95.521	no
[Ref.: #69480]	gram-positive	yes	92.477	no
[Ref.: #69480]	anaerobic	no	99.261	no
[Ref.: #69480]	aerobic	yes	94.442	no
[Ref.: #69480]	halophile	no	88.458	no
[Ref.: #69480]	spore-forming	yes	95.362	no
[Ref.: #69480]	glucose-util	yes	89.35	yes
[Ref.: #69480]	flagellated	no	97.689	no
[Ref.: #69480]	thermophile	no	98.415	yes
[Ref.: #69480]	glucose-ferment	no	85.585	no

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