Name: Porphyromonas canoris CCUG 36550
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 148888

Type strain:

Species: Porphyromonas canoris

Culture col. no.: CCUG 36550, JCM 16132, NCTC 12835, CIP 104881, JCM 11138, DSM 18809, VPB 4878

Strain history: CCUG 36550 <-- NCTC 12835 <-- H. Jousimies-Somer.

NCBI tax ID(s): 36875 (species)

SI-ID 56311

CCUG 36550, NCTC 12835, CIP 104881, JCM 11138, DSM 18809, JCM 16132

Special Collections

Other strains from Porphyromonas canoris

Section

When using BacDive for research please cite our paper

Porphyromonas canoris CCUG 36550 is an anaerobe, mesophilic bacterium that was isolated from Dog subgingival pocket,natural occur.periodontitis.

anaerobe
mesophilic
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	09-12-2024 (DD-MM-YYYY)
	Domain	*Bacteria*
	Phylum	*Bacteroidota*
	Class	*Bacteroidia*
	Order	*Bacteroidales*
	Family	*Porphyromonadaceae*
	Genus	*Porphyromonas*
	Species	**Porphyromonas canoris**
	Full Scientific Name (LPSN)	Porphyromonas canoris Love et al. 1994

Information on culture and growth conditions Culture and growth conditions

	Temperatures	Kind of temperature		Temperature
[Ref.: #67770]			growth	37 °C

Information on physiology and metabolism Physiology and metabolism

[Ref.: #53220]

Oxygen tolerance

anaerobe

Fatty acid profile

Metadata FA analysis

Reference

[Ref.: #53220]

Fatty acid	Percentage	ECL
C15:0 ISO	42.1	14.621
C17:0 iso 3OH	17.4	18.161
C18:2 ω6,9c/C18:0 ANTE	12.7	17.724
C16:0	5.3	16
C18:1 ω9c	3.8	17.769
C15:0 ISO 3OH	2.9	16.135
C18:0	2.7	18
C15:0 ANTEISO	2.4	14.711
C16:0 3OH	1.5	17.52
Unidentified	1.5	14.93
C17:0 iso	1.5	16.629
Unidentified	1.4	16.295
C15:0	1.3	15
unknown 13.566	0.7	13.566
C14:0	0.6	14
C13:0 iso	0.5	12.612
C16:1 ω7c	0.4	15.819
Unidentified	0.4	18.307
unknown 16.580	0.4	16.58
C20:4 ω6,9,12,15c	0.3	19.395
C16:0 iso	0.2	15.626
Unidentified	0.1	18.057

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #53220]	Sample type/isolated from	Dog subgingival pocket,natural occur.periodontitis
[Ref.: #53220]	Sampling date	1990
[Ref.: #53220]	Geographic location (country and/or sea, region)	Helsinki
[Ref.: #53220]	Country	Finland
[Ref.: #53220]	Country ISO 3 Code	FIN
[Ref.: #53220]	Continent	Europe

[Ref.: #67770]	Sample type/isolated from	Gingival sulcal site of dog
* marker position based on {}

Isolation sources categories

#Host	#Mammals	#Canidae (Dog)
#Host Body-Site	#Oral cavity and airways	#Mouth

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence AB525416 (>99% sequence identity) for Porphyromonas canoris subclade from Microbeatlas

Aquatic Samples	88
Soil Samples	153
Animal Samples	6928
Plant Samples	38
Total Samples	7207

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Porphyromonas canoris gene for 16S ribosomal RNA, paertial sequence, strain: JCM 16132	AB525416	1493	GenBank ENA	36875 tax ID

Availability in culture collections External links

[Ref.: #53220]

Culture collection no.

CCUG 36550, JCM 16132, NCTC 12835, CIP 104881, JCM 11138, DSM 18809, VPB 4878

[Ref.: #103375]

SI-ID 56311

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Porphyromonas canoris sp. nov., an asaccharolytic, black-pigmented species from the gingival sulcus of dogs.	Love DN, Karjalainen J, Kanervo A, Forsblom B, Sarkiala E, Bailey GD, Wigney DI, Jousimies-Somer H	Int J Syst Bacteriol	10.1099/00207713-44-2-204	1994	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#53220 Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 36550
#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#103375

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID56311.1 )

* These data were automatically processed and therefore are not curated

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