Name: Streptomyces alanosinicus DSM 40606
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 14887

Type strain:

Species: Streptomyces alanosinicus

Culture col. no.: DSM 40606, ATCC 15710, CBS 348.69, CBS 794.72, IFO 13493, ISP 5606, NBRC 13493, RIA 1454, JCM 4714, BCRC 16211, CGMCC 4.1634, KCTC 9683, NRRL B-3627, VKM Ac-1752

Strain history: KCC S-0714 <-- IFO 13493 <-- SAJ <-- ISP 5606 <-- ATCC 15710 <-- Lepetit V/119.

NCBI tax ID(s): 68171 (species)

SI-ID 36447

ATCC 15710, DSM 40606, IFO 13493, JCM 4714, NRRL B-3627, VKM Ac-1752, KCTC 9683, AS 4.1634, NBRC 13493, HAMBI 983, BCRC 16211, CCRC 16211, CGMCC 4.1634, CBS 348.69

Other strains from Streptomyces alanosinicus

S. alanosinicus ST028253(HKI), A85/17, FSU-3764, ...
S. alanosinicus SF005554(FSU),
S. alanosinicus SF002222(FSU),
S. alanosinicus SF003764(FSU),

Section

Streptomyces alanosinicus DSM 40606 is a spore-forming, mesophilic, Gram-positive bacterium that was isolated from soil.

Gram-positive
spore-forming
mesophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Actinomycetota*
	Class	*Actinomycetes*
	Order	*Kitasatosporales*
	Family	*Streptomycetaceae*
	Genus	*Streptomyces*
	Species	**Streptomyces alanosinicus**
	Full Scientific Name (LPSN)	Streptomyces alanosinicus Thiemann and Beretta 1966 (Approved Lists 1980)

Information on morphological and physiological properties Morphology

[Ref.: #69480]	Gram stain	positive Confidence in %100

Information on culture and growth conditions Culture and growth conditions

[Ref.: #9681]

Culture medium

GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)

[Ref.: #9681]

Culture medium growth

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Culture medium link

Medium recipe at MediaDive

[Ref.: #9681]

Culture medium composition

expand / minimize

[Ref.: #9681]

Culture medium

STARCH - MINERAL SALT - AGAR (STMS) (DSMZ Medium 252)

[Ref.: #9681]

Culture medium growth

[Ref.: #9681]

Culture medium link

Medium recipe provided by DSMZ

[Ref.: #9681]

Culture medium

ROLLED OATS MINERAL MEDIUM (DSMZ Medium 84)

[Ref.: #9681]

Culture medium growth

[Ref.: #9681]

Culture medium link

Medium recipe provided by DSMZ

	Temperatures	Kind of temperature		Temperature
[Ref.: #9681]			growth	28 °C
[Ref.: #67770]			growth	28 °C

[Ref.: #9681]	Temperature range	mesophilic
[Ref.: #67770]	Temperature range	mesophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #69481]	Ability of spore formation	yes Confidence in %100
[Ref.: #69480]	Ability of spore formation	yes Confidence in %100

[Ref.: #9681]

Name of produced compound

alanosine

	Metabolite production	Metabolite	Production
[Ref.: #67770]		alanosine	yes

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #9681]	Sample type/isolated from	soil
[Ref.: #9681]	Country	Brazil
[Ref.: #9681]	Country ISO 3 Code	BRA
[Ref.: #9681]	Continent	Middle and South America

[Ref.: #67770]	Sample type/isolated from	Soil
[Ref.: #67770]	Country	Brazil
[Ref.: #67770]	Country ISO 3 Code	BRA
[Ref.: #67770]	Continent	Middle and South America
* marker position based on {}

Isolation sources categories

#Environmental

#Terrestrial

#Soil

What are isolation sources categories?

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #9681]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #20218]	Streptomyces alanosinicus gene for 16S ribosomal RNA, partial sequence, strain: JCM 4714	D44304	120	ENA	68171 tax ID	*
[Ref.: #20218]	Streptomyces alanosinicus gene for 16S rRNA, partial sequence, strain: NBRC 13493	AB184442	1440	ENA	68171 tax ID	*
[Ref.: #20218]	Streptomyces alanosinicus strain NRRL B-3627 16S ribosomal RNA gene, partial sequence	HQ426712	1488	ENA	68171 tax ID	*

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Streptomyces alanosinicus JCM 4714	GCA_014650595	contig	GenBank	68171 tax ID	*
[Ref.: #66792]	Streptomyces alanosinicus strain JCM 4714	68171.4	wgs	PATRIC	68171 tax ID	*

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from GenomeNet Sporulation v. 1 based on: Streptomyces alanosinicus strain JCM 4714 PATRIC: 68171.4
[Ref.: #69481]	spore-forming	yes	100	no

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Streptomyces alanosinicus strain JCM 4714 PATRIC: 68171.4
[Ref.: #69480]	gram-positive	yes	88.116	no
[Ref.: #69480]	anaerobic	no	99.039	no
[Ref.: #69480]	halophile	no	94.058	no
[Ref.: #69480]	spore-forming	yes	94.277	no
[Ref.: #69480]	glucose-util	yes	90.285	no
[Ref.: #69480]	thermophile	no	97.967	no
[Ref.: #69480]	flagellated	no	98.064	no
[Ref.: #69480]	aerobic	yes	91.039	no
[Ref.: #69480]	glucose-ferment	no	87.664	no
[Ref.: #69480]	motile	no	93.329	no

Availability in culture collections External links

[Ref.: #9681]

Culture collection no.

DSM 40606, ATCC 15710, CBS 348.69, CBS 794.72, IFO 13493, ISP 5606, NBRC 13493, RIA 1454, JCM 4714, BCRC 16211, CGMCC 4.1634, KCTC 9683, NRRL B-3627, VKM Ac-1752

[Ref.: #83996]

SI-ID 36447

Literature:

Topic	Title	Authors	Journal	DOI	Year
Metabolism	The l-Alanosine Gene Cluster Encodes a Pathway for Diazeniumdiolate Biosynthesis.	Ng TL, McCallum ME, Zheng CR, Wang JX, Wu KJY, Balskus EP	Chembiochem	10.1002/cbic.201900565	2019	*

References

#9681

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 40606

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69481

Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch: Predictions based on the model GenomeNet Sporulation v. 1 . ( DOI 10.21203/rs.3.rs-2527258/v1 )

#83996

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID36447.1 )

* These data were automatically processed and therefore are not curated

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Streptomyces alanosinicus strain JCM 4714

Streptomyces alanosinicus strain JCM 4714

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