Streptococcus pseudopneumoniae O 108 is a microaerophile, mesophilic, Gram-positive prokaryote that was isolated from human sputum, pneumonia.
Gram-positive coccus-shaped microaerophile mesophilic genome sequence 16S sequence| @ref 20215 |
|
|
| Domain Bacillati |
| Phylum Bacillota |
| Class Bacilli |
| Order Lactobacillales |
| Family Streptococcaceae |
| Genus Streptococcus |
| Species Streptococcus pseudopneumoniae |
| Full scientific name Streptococcus pseudopneumoniae Arbique et al. 2005 |
| @ref | Name | Growth | Medium link | Composition | |
|---|---|---|---|---|---|
| 7651 | TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92) | Medium recipe at MediaDive | Name: TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92) Composition: Trypticase soy broth 30.0 g/l Agar 15.0 g/l Yeast extract 3.0 g/l Distilled water | ||
| 7651 | COLUMBIA BLOOD MEDIUM (DSMZ Medium 693) | Medium recipe at MediaDive | Name: COLUMBIA BLOOD MEDIUM (DSMZ Medium 693) Composition: Defibrinated sheep blood 50.0 g/l Columbia agar base | ||
| 32745 | MEDIUM 6 - Columbia agar with 10 % horse blood | Distilled water make up to (1000.000 ml);Columbia agar (39.000 g);Horseblood (100.000 ml) | |||
| 121999 | CIP Medium 6 | Medium recipe at CIP |
| @ref | Spore formation | Confidence | |
|---|---|---|---|
| 125439 | 91 |
| @ref | Salt | Growth | Tested relation | Concentration | |
|---|---|---|---|---|---|
| 121999 | NaCl | growth | 6.5 % |
| @ref | Chebi-ID | Metabolite | Utilization activity | Kind of utilization tested | |
|---|---|---|---|---|---|
| 68381 | 40585 ChEBI | alpha-cyclodextrin | - | builds acid from | from API rID32STR |
| 68371 | 18305 ChEBI | arbutin | - | builds acid from | from API 50CH acid |
| 68381 | 29016 ChEBI | arginine | - | hydrolysis | from API rID32STR |
| 68370 | 29016 ChEBI | arginine | - | hydrolysis | from API 20STR |
| 68380 | 29016 ChEBI | arginine | - | hydrolysis | from API rID32A |
| 68371 | 17057 ChEBI | cellobiose | - | builds acid from | from API 50CH acid |
| 68371 | 17108 ChEBI | D-arabinose | - | builds acid from | from API 50CH acid |
| 68381 | 18333 ChEBI | D-arabitol | - | builds acid from | from API rID32STR |
| 68371 | 18333 ChEBI | D-arabitol | - | builds acid from | from API 50CH acid |
| 68371 | 28847 ChEBI | D-fucose | - | builds acid from | from API 50CH acid |
| 68371 | 12936 ChEBI | D-galactose | + | builds acid from | from API 50CH acid |
| 68371 | 17634 ChEBI | D-glucose | + | builds acid from | from API 50CH acid |
| 68371 | 62318 ChEBI | D-lyxose | - | builds acid from | from API 50CH acid |
| 68381 | 16899 ChEBI | D-mannitol | - | builds acid from | from API rID32STR |
| 68370 | 16899 ChEBI | D-mannitol | - | builds acid from | from API 20STR |
| 68371 | 16899 ChEBI | D-mannitol | - | builds acid from | from API 50CH acid |
| 68380 | 16024 ChEBI | D-mannose | + | fermentation | from API rID32A |
| 68381 | 16988 ChEBI | D-ribose | - | builds acid from | from API rID32STR |
| 68370 | 16988 ChEBI | D-ribose | - | builds acid from | from API 20STR |
| 68371 | 16988 ChEBI | D-ribose | - | builds acid from | from API 50CH acid |
| 68371 | 17924 ChEBI | D-sorbitol | - | builds acid from | from API 50CH acid |
| 68370 | 17924 ChEBI | D-sorbitol | - | builds acid from | from API 20STR |
| 68381 | 16443 ChEBI | D-tagatose | - | builds acid from | from API rID32STR |
| 68371 | 16443 ChEBI | D-tagatose | - | builds acid from | from API 50CH acid |
| 68371 | 65327 ChEBI | D-xylose | - | builds acid from | from API 50CH acid |
| 68371 | 17113 ChEBI | erythritol | - | builds acid from | from API 50CH acid |
| 121999 | 4853 ChEBI | esculin | - | hydrolysis | |
| 68371 | 4853 ChEBI | esculin | - | builds acid from | from API 50CH acid |
| 68371 | 16813 ChEBI | galactitol | - | builds acid from | from API 50CH acid |
| 68371 | 17754 ChEBI | glycerol | - | builds acid from | from API 50CH acid |
| 68381 | 28087 ChEBI | glycogen | - | builds acid from | from API rID32STR |
| 68370 | 28087 ChEBI | glycogen | - | builds acid from | from API 20STR |
| 121999 | 606565 ChEBI | hippurate | + | hydrolysis | |
| 68370 | 606565 ChEBI | hippurate | - | hydrolysis | from API 20STR |
| 68371 | 15443 ChEBI | inulin | - | builds acid from | from API 50CH acid |
| 68370 | 15443 ChEBI | inulin | - | builds acid from | from API 20STR |
| 68381 | 30849 ChEBI | L-arabinose | - | builds acid from | from API rID32STR |
| 68370 | 30849 ChEBI | L-arabinose | - | builds acid from | from API 20STR |
| 68371 | 30849 ChEBI | L-arabinose | - | builds acid from | from API 50CH acid |
| 68371 | 18287 ChEBI | L-fucose | - | builds acid from | from API 50CH acid |
| 68380 | 29985 ChEBI | L-glutamate | - | degradation | from API rID32A |
| 68371 | 62345 ChEBI | L-rhamnose | - | builds acid from | from API 50CH acid |
| 68371 | 17266 ChEBI | L-sorbose | - | builds acid from | from API 50CH acid |
| 68371 | 65328 ChEBI | L-xylose | - | builds acid from | from API 50CH acid |
| 68381 | 17716 ChEBI | lactose | + | builds acid from | from API rID32STR |
| 68381 | 6731 ChEBI | melezitose | - | builds acid from | from API rID32STR |
| 68371 | 6731 ChEBI | melezitose | - | builds acid from | from API 50CH acid |
| 68381 | 28053 ChEBI | melibiose | - | builds acid from | from API rID32STR |
| 68371 | 28053 ChEBI | melibiose | - | builds acid from | from API 50CH acid |
| 68371 | 320061 ChEBI | methyl alpha-D-glucopyranoside | - | builds acid from | from API 50CH acid |
| 68371 | 43943 ChEBI | methyl alpha-D-mannoside | - | builds acid from | from API 50CH acid |
| 68381 | 320055 ChEBI | methyl beta-D-glucopyranoside | - | builds acid from | from API rID32STR |
| 68371 | 74863 ChEBI | methyl beta-D-xylopyranoside | - | builds acid from | from API 50CH acid |
| 68371 | 17268 ChEBI | myo-inositol | - | builds acid from | from API 50CH acid |
| 68371 | 59640 ChEBI | N-acetylglucosamine | + | builds acid from | from API 50CH acid |
| 68380 | 17632 ChEBI | nitrate | - | reduction | from API rID32A |
| 121999 | 17632 ChEBI | nitrate | - | reduction | |
| 121999 | 16301 ChEBI | nitrite | - | reduction | |
| 68371 | Potassium 2-ketogluconate | - | builds acid from | from API 50CH acid | |
| 68381 | 16634 ChEBI | raffinose | - | builds acid from | from API rID32STR |
| 68371 | 16634 ChEBI | raffinose | - | builds acid from | from API 50CH acid |
| 68370 | 16634 ChEBI | raffinose | - | builds acid from | from API 20STR |
| 68380 | 16634 ChEBI | raffinose | + | fermentation | from API rID32A |
| 68371 | 15963 ChEBI | ribitol | - | builds acid from | from API 50CH acid |
| 68381 | 30911 ChEBI | sorbitol | - | builds acid from | from API rID32STR |
| 68371 | 17992 ChEBI | sucrose | + | builds acid from | from API 50CH acid |
| 68381 | 27082 ChEBI | trehalose | - | builds acid from | from API rID32STR |
| 68371 | 27082 ChEBI | trehalose | - | builds acid from | from API 50CH acid |
| 68370 | 27082 ChEBI | trehalose | - | builds acid from | from API 20STR |
| 68380 | 27897 ChEBI | tryptophan | - | energy source | from API rID32A |
| 68381 | 16199 ChEBI | urea | - | hydrolysis | from API rID32STR |
| 68380 | 16199 ChEBI | urea | - | hydrolysis | from API rID32A |
| 68371 | 17151 ChEBI | xylitol | - | builds acid from | from API 50CH acid |
| @ref | Chebi-ID | Metabolite | Production | |
|---|---|---|---|---|
| 68381 | 15688 ChEBI | acetoin | from API rID32STR | |
| 68380 | 35581 ChEBI | indole | from API rID32A |
| @ref | Value | Activity | Ec | |
|---|---|---|---|---|
| 68382 | acid phosphatase | + | 3.1.3.2 | from API zym |
| 68380 | alanine arylamidase | + | 3.4.11.2 | from API rID32A |
| 68381 | Alanyl-Phenylalanyl-Proline arylamidase | + | from API rID32STR | |
| 121999 | alcohol dehydrogenase | - | 1.1.1.1 | |
| 68382 | alkaline phosphatase | + | 3.1.3.1 | from API zym |
| 68381 | alkaline phosphatase | + | 3.1.3.1 | from API rID32STR |
| 68380 | alkaline phosphatase | + | 3.1.3.1 | from API rID32A |
| 68370 | alkaline phosphatase | + | 3.1.3.1 | from API 20STR |
| 68380 | alpha-arabinosidase | - | 3.2.1.55 | from API rID32A |
| 68382 | alpha-chymotrypsin | + | 3.4.21.1 | from API zym |
| 68382 | alpha-fucosidase | - | 3.2.1.51 | from API zym |
| 68380 | alpha-fucosidase | - | 3.2.1.51 | from API rID32A |
| 68381 | alpha-galactosidase | - | 3.2.1.22 | from API rID32STR |
| 68382 | alpha-galactosidase | - | 3.2.1.22 | from API zym |
| 68380 | alpha-galactosidase | - | 3.2.1.22 | from API rID32A |
| 68370 | alpha-galactosidase | - | 3.2.1.22 | from API 20STR |
| 68382 | alpha-glucosidase | + | 3.2.1.20 | from API zym |
| 68380 | alpha-glucosidase | + | 3.2.1.20 | from API rID32A |
| 68382 | alpha-mannosidase | - | 3.2.1.24 | from API zym |
| 68380 | arginine dihydrolase | - | 3.5.3.6 | from API rID32A |
| 68381 | arginine dihydrolase | - | 3.5.3.6 | from API rID32STR |
| 68370 | arginine dihydrolase | - | 3.5.3.6 | from API 20STR |
| 68382 | beta-galactosidase | - | 3.2.1.23 | from API zym |
| 121999 | beta-galactosidase | - | 3.2.1.23 | |
| 68381 | beta-galactosidase | - | 3.2.1.23 | from API rID32STR |
| 68380 | beta-galactosidase | + | 3.2.1.23 | from API rID32A |
| 68380 | beta-Galactosidase 6-phosphate | + | from API rID32A | |
| 68382 | beta-glucosidase | - | 3.2.1.21 | from API zym |
| 68380 | beta-glucosidase | - | 3.2.1.21 | from API rID32A |
| 68381 | beta-glucosidase | - | 3.2.1.21 | from API rID32STR |
| 68381 | beta-glucuronidase | - | 3.2.1.31 | from API rID32STR |
| 68382 | beta-glucuronidase | - | 3.2.1.31 | from API zym |
| 68380 | beta-glucuronidase | - | 3.2.1.31 | from API rID32A |
| 68370 | beta-glucuronidase | - | 3.2.1.31 | from API 20STR |
| 68381 | beta-mannosidase | - | 3.2.1.25 | from API rID32STR |
| 7651 | catalase | - | 1.11.1.6 | |
| 121999 | catalase | - | 1.11.1.6 | |
| 68382 | cystine arylamidase | - | 3.4.11.3 | from API zym |
| 7651 | cytochrome-c oxidase | - | 1.9.3.1 | |
| 68382 | esterase (C 4) | + | from API zym | |
| 68382 | esterase lipase (C 8) | + | from API zym | |
| 121999 | gamma-glutamyltransferase | - | 2.3.2.2 | |
| 68380 | glutamate decarboxylase | - | 4.1.1.15 | from API rID32A |
| 68380 | glutamyl-glutamate arylamidase | - | from API rID32A | |
| 68380 | glycin arylamidase | - | from API rID32A | |
| 68381 | glycyl tryptophan arylamidase | + | from API rID32STR | |
| 68380 | histidine arylamidase | - | from API rID32A | |
| 68380 | L-arginine arylamidase | + | from API rID32A | |
| 68382 | leucine arylamidase | + | 3.4.11.1 | from API zym |
| 68380 | leucine arylamidase | + | 3.4.11.1 | from API rID32A |
| 68370 | leucine arylamidase | + | 3.4.11.1 | from API 20STR |
| 68380 | leucyl glycin arylamidase | - | 3.4.11.1 | from API rID32A |
| 68382 | lipase (C 14) | - | from API zym | |
| 121999 | lysine decarboxylase | - | 4.1.1.18 | |
| 68381 | N-acetyl-beta-glucosaminidase | - | 3.2.1.52 | from API rID32STR |
| 68382 | N-acetyl-beta-glucosaminidase | - | 3.2.1.52 | from API zym |
| 68380 | N-acetyl-beta-glucosaminidase | + | 3.2.1.52 | from API rID32A |
| 68382 | naphthol-AS-BI-phosphohydrolase | - | from API zym | |
| 121999 | ornithine decarboxylase | - | 4.1.1.17 | |
| 121999 | oxidase | - | ||
| 68380 | phenylalanine arylamidase | + | from API rID32A | |
| 68380 | proline-arylamidase | - | 3.4.11.5 | from API rID32A |
| 68381 | pyrrolidonyl arylamidase | - | 3.4.19.3 | from API rID32STR |
| 68380 | pyrrolidonyl arylamidase | - | 3.4.19.3 | from API rID32A |
| 68370 | pyrrolidonyl arylamidase | - | 3.4.19.3 | from API 20STR |
| 68380 | serine arylamidase | + | from API rID32A | |
| 68382 | trypsin | - | 3.4.21.4 | from API zym |
| 68380 | tryptophan deaminase | - | 4.1.99.1 | from API rID32A |
| 68380 | tyrosine arylamidase | + | from API rID32A | |
| 68381 | urease | - | 3.5.1.5 | from API rID32STR |
| 68380 | urease | - | 3.5.1.5 | from API rID32A |
| 68382 | valine arylamidase | + | from API zym |
| @ref | ControlQ | GLY | ERY | DARA | LARA | RIB | DXYL | LXYL | ADO | MDX | GAL | GLU | FRU | MNE | SBE | RHA | DUL | INO | MAN | SOR | MDM | MDG | NAG | AMY | ARB | ESC | SAL | CEL | MAL | LAC | MEL | SAC | TRE | INU | MLZ | RAF | AMD | GLYG | XLT | GEN | TUR | LYX | TAG | DFUC | LFUC | DARL | LARL | GNT | 2KG | 5KG | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 121999 | not determinedn.d. | - | - | - | - | - | - | - | - | - | + | + | +/- | +/- | - | - | - | - | - | - | - | - | + | +/- | - | - | +/- | - | +/- | +/- | - | + | - | - | - | - | +/- | +/- | - | +/- | +/- | - | - | - | - | - | +/- | +/- | - | +/- |
| @ref | ADH (Arg) | beta GLU | beta GAR | beta GUR | alpha GAL | PAL | RIB | MAN | SOR | LAC | TRE | RAF | SAC | LARA | DARL | Acid from alpha-cyclodextrinCDEX | Acetoin production (Voges Proskauer test)VP | Alanyl-Phenylalanyl-Proline arylamidaseAPPA | beta GAL | Pyrrolidonyl arylamidasePyrA | N-Acetyl-glucosaminidasebeta NAG | Glycyl-tryptophan arylamidaseGTA | HIP | GLYG | PUL | MAL | MEL | MLZ | Acidification of methyl beta-D-glucopyranosideMbeta DG | TAG | beta MAN | URE | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 7651 | - | - | + | - | - | + | - | - | - | + | - | - | + | - | - | - | - | + | - | - | - | + | + | - | + | + | - | - | - | - | - | - | |
| 7651 | - | - | + | - | - | + | - | - | - | + | - | - | - | - | - | - | - | + | - | - | - | + | - | - | - | - | - | - | - | - | - | - | |
| 7651 | - | - | + | - | - | + | - | - | - | + | - | - | + | - | - | - | - | + | - | - | - | + | - | - | + | + | - | - | - | - | - | - |
| Cat1 | Cat2 | Cat3 | |
|---|---|---|---|
| #Infection | #Disease | - | |
| #Host | #Human | - | |
| #Host Body Product | #Fluids | #Sputum |
Global distribution of 16S sequence EU156785 (>99% sequence identity) for Streptococcus from Microbeatlas ![]()
| @ref | Description | Assembly level | INSDC accession | BV-BRC accession | IMG accession | NCBI tax ID | Score | |
|---|---|---|---|---|---|---|---|---|
| 66792 | ASM208707v1 assembly for Streptococcus pseudopneumoniae ATCC BAA-960 = CCUG 49455 | scaffold | 889205 | 56.16 | ||||
| 66792 | ASM25782v1 assembly for Streptococcus pseudopneumoniae ATCC BAA-960 = CCUG 49455 | contig | 889205 | 28.06 |
| @ref | Description | Accession | Length | Database | NCBI tax ID | |
|---|---|---|---|---|---|---|
| 20218 | Streptococcus pseudopneumoniae strain CCUG 49455 16S ribosomal RNA gene, partial sequence | EU156785 | 1329 | 889205 | ||
| 20218 | Streptococcus pseudopneumoniae strain CCUG 49455 16S ribosomal RNA gene, partial sequence; 16S-23S ribosomal RNA intergenic spacer, complete sequence; and 23S ribosomal RNA gene, partial sequence | HM241930 | 459 | 889205 | ||
| 7651 | Streptococcus pseudopneumoniae strain ATCC BAA-960 16S ribosomal RNA gene, partial sequence | AY612844 | 1468 | 889205 | ||
| 124043 | Streptococcus pseudopneumoniae ATCC BAA-960 = CCUG 49455 gene for 16S rRNA, partial sequence. | LC752420 | 588 | 257758 |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125439 | spore_formation | BacteriaNetⓘ | no | 91.00 | no |
| 125439 | motility | BacteriaNetⓘ | no | 88.30 | no |
| 125439 | gram_stain | BacteriaNetⓘ | positive | 88.40 | no |
| 125439 | oxygen_tolerance | BacteriaNetⓘ | microaerophile | 98.50 | no |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125438 | gram-positive | gram-positiveⓘ | yes | 89.24 | no |
| 125438 | anaerobic | anaerobicⓘ | no | 64.42 | yes |
| 125438 | aerobic | aerobicⓘ | no | 97.93 | yes |
| 125438 | spore-forming | spore-formingⓘ | no | 79.09 | no |
| 125438 | thermophilic | thermophileⓘ | no | 96.00 | yes |
| 125438 | flagellated | motile2+ⓘ | no | 91.00 | no |
| Topic | Title | Authors | Journal | DOI | Year | |
|---|---|---|---|---|---|---|
| Evaluation of the Performance Characteristics of a New POC Multiplex PCR Assay for the Diagnosis of Viral and Bacterial Neuromeningeal Infections. | Le Bars H, Madany N, Lamoureux C, Beauruelle C, Vallet S, Payan C, Pilorge L. | Diagnostics (Basel) | 10.3390/diagnostics13061110 | 2023 | ||
| Streptococcus humanilactis sp.nov., isolated from healthy nursing mother's breast milk. | Guo X, Han F, Cong L, Li Y, Wu Y, Liu C, Yang J, Na R, Liu W. | Arch Microbiol | 10.1007/s00203-022-03249-2 | 2022 | ||
| Phylogeny | Performance assessment of the Bruker Biotyper MALDI-TOF MS for the identification of difficult-to-identify viridans group streptococci. | Wan T-W, Lee T-F, Chen X-J, Hunag Y-T, Teng L-J, Hsueh P-R, Chiu H-C. | J Clin Microbiol | 10.1128/jcm.01143-23 | 2023 | |
| Contribution of Streptococcus pseudopneumoniae and Streptococcus salivarius to vocal fold mucosal integrity and function. | Lungova V, Gowda M, Fernandez JM, Bartley S, Venkatraman A, Rey FE, Thibeault SL. | Dis Model Mech | 10.1242/dmm.050670 | 2024 | ||
| Streptococcus strain D19T as a probiotic candidate to modulate oral health. | Zhang WX, Xiao CL. | BMC Microbiol | 10.1186/s12866-023-03066-7 | 2023 | ||
| Pathogenicity | Description of optochin-resistant Streptococcus pneumoniae due to an uncommon mutation in the atpA gene and comparison with previously identified atpC mutants from Brazil. | Souza ARV, de Pina SECM, Costa NS, Neves FPG, Merquior VLC, Peralta JM, Pinto TCA, Teixeira LM. | Sci Rep | 10.1038/s41598-021-87071-8 | 2021 | |
| Upregulation of the PatAB Transporter Confers Fluoroquinolone Resistance to Streptococcus pseudopneumoniae. | Alvarado M, Martin-Galiano AJ, Ferrandiz MJ, Zaballos A, de la Campa AG. | Front Microbiol | 10.3389/fmicb.2017.02074 | 2017 | ||
| Identification of Clinically Relevant Streptococcus and Enterococcus Species Based on Biochemical Methods and 16S rRNA, sodA, tuf, rpoB, and recA Gene Sequencing. | Kosecka-Strojek M, Wolska M, Zabicka D, Sadowy E, Miedzobrodzki J. | Pathogens | 10.3390/pathogens9110939 | 2020 | ||
| Phylogeny | Streptococcus pseudopneumoniae identification by pherotype: a method to assist understanding of a potentially emerging or overlooked pathogen. | Leung MH, Ling CL, Ciesielczuk H, Lockwood J, Thurston S, Charalambous BM, Gillespie SH. | J Clin Microbiol | 10.1128/jcm.00131-12 | 2012 | |
| Enzymology | Species-specific characteristics of the biofilm generated in silicone tube: an in vitro study. | Kim DJ, Park JH, Chang M. | BMC Ophthalmol | 10.1186/s12886-018-0750-1 | 2018 | |
| Phylogeny | recA-based PCR assay for accurate differentiation of Streptococcus pneumoniae from other viridans streptococci. | Zbinden A, Kohler N, Bloemberg GV. | J Clin Microbiol | 10.1128/jcm.01450-10 | 2011 | |
| Enzymology | Characteristics of Streptococcus pseudopneumoniae isolated from purulent sputum samples. | Keith ER, Podmore RG, Anderson TP, Murdoch DR. | J Clin Microbiol | 10.1128/jcm.44.3.923-927.2006 | 2006 | |
| Phylogeny | Insight into the Diversity of Penicillin-Binding Protein 2x Alleles and Mutations in Viridans Streptococci. | van der Linden M, Otten J, Bergmann C, Latorre C, Linares J, Hakenbeck R. | Antimicrob Agents Chemother | 10.1128/aac.02646-16 | 2017 | |
| Enzymology | Evolutionary inactivation of a sialidase in group B Streptococcus. | Yamaguchi M, Hirose Y, Nakata M, Uchiyama S, Yamaguchi Y, Goto K, Sumitomo T, Lewis AL, Kawabata S, Nizet V. | Sci Rep | 10.1038/srep28852 | 2016 | |
| Phylogeny | Differentiation of Streptococcus pneumoniae from nonpneumococcal streptococci of the Streptococcus mitis group by matrix-assisted laser desorption ionization-time of flight mass spectrometry. | Werno AM, Christner M, Anderson TP, Murdoch DR. | J Clin Microbiol | 10.1128/jcm.00508-12 | 2012 | |
| Phylogeny | Differentiation of Streptococcus pneumoniae conjunctivitis outbreak isolates by matrix-assisted laser desorption ionization-time of flight mass spectrometry. | Williamson YM, Moura H, Woolfitt AR, Pirkle JL, Barr JR, Carvalho Mda G, Ades EP, Carlone GM, Sampson JS. | Appl Environ Microbiol | 10.1128/aem.00791-08 | 2008 | |
| Phylogeny | Highly penicillin-resistant multidrug-resistant pneumococcus-like strains colonizing children in Oeiras, Portugal: genomic characteristics and implications for surveillance. | Simoes AS, Sa-Leao R, Eleveld MJ, Tavares DA, Carrico JA, Bootsma HJ, Hermans PW. | J Clin Microbiol | 10.1128/jcm.01313-09 | 2010 | |
| Evaluation of several biochemical and molecular techniques for identification of Streptococcus pneumoniae and Streptococcus pseudopneumoniae and their detection in respiratory samples. | Wessels E, Schelfaut JJ, Bernards AT, Claas EC. | J Clin Microbiol | 10.1128/jcm.06609-11 | 2012 | ||
| Enzymology | Incidence and pathogenic effect of Streptococcus pseudopneumoniae. | Harf-Monteil C, Granello C, Le Brun C, Monteil H, Riegel P. | J Clin Microbiol | 10.1128/jcm.02643-05 | 2006 | |
| Fluorescence Imaging of Streptococcus pneumoniae with the Helix pomatia agglutinin (HPA) As a Potential, Rapid Diagnostic Tool. | Domenech M, Garcia E. | Front Microbiol | 10.3389/fmicb.2017.01333 | 2017 | ||
| Genetics | Bacteriocin Producing Streptococcus agalactiae Strains Isolated from Bovine Mastitis in Brazil. | Vidal Amaral JR, Juca Ramos RT, Almeida Araujo F, Bentes Kato R, Figueira Aburjaile F, de Castro Soares S, Goes-Neto A, Matiuzzi da Costa M, Azevedo V, Brenig B, Soares de Oliveira S, Soares Rosado A. | Microorganisms | 10.3390/microorganisms10030588 | 2022 | |
| Pathogenicity | In vitro destruction of Streptococcus pneumoniae biofilms with bacterial and phage peptidoglycan hydrolases. | Domenech M, Garcia E, Moscoso M. | Antimicrob Agents Chemother | 10.1128/aac.00492-11 | 2011 | |
| Phylogeny | Use of phylogenetic and phenotypic analyses to identify nonhemolytic streptococci isolated from bacteremic patients. | Hoshino T, Fujiwara T, Kilian M. | J Clin Microbiol | 10.1128/jcm.43.12.6073-6085.2005 | 2005 | |
| Transcriptome | Comparative transcriptomic analysis of streptococcus pseudopneumoniae with viridans group streptococci. | Park HK, Myung SC, Kim W | BMC Microbiol | 10.1186/1471-2180-12-77 | 2012 | |
| Phylogeny | Streptococcus hohhotensis sp. nov., isolated from the breast milk of a healthy woman. | Li Y, Han F, Wu Y, Li W, Ren D, Su X, Zhao L, Menghe B, Liu W. | Int J Syst Evol Microbiol | 10.1099/ijsem.0.006354 | 2024 | |
| Streptococcus vulneris sp. nov., isolated from wound of patient with diabetic foot ulcer (DFU). | Chung JH, Wang LT, Chen YS, Lee YS, Lin ST, Chang YC, Wu HC, Dai YJ, Liao WQ, Kao FC, Li JH. | Arch Microbiol | 10.1007/s00203-022-02981-z | 2022 | ||
| Phylogeny | Streptococcus chosunense sp. nov., Isolated from Human Postoperative Maxillary Cyst. | Lim YK, Park SN, Shin JH, Chang YH, Shin Y, Paek J, Kim H, Kook JK. | Curr Microbiol | 10.1007/s00284-019-01746-0 | 2019 | |
| Phylogeny | Streptococcus gwangjuense sp. nov., Isolated from Human Pericoronitis. | Park SN, Lim YK, Shin JH, Chang YH, Shin Y, Paek J, Kim H, Kook JK. | Curr Microbiol | 10.1007/s00284-019-01687-8 | 2019 | |
| Genetics | Description and genomic characterization of Streptococcus symci sp. nov., isolated from a child's oropharynx. | Qi H, Liu D, Zou Y, Wang N, Tian H, Xiao C. | Antonie Van Leeuwenhoek | 10.1007/s10482-020-01505-3 | 2021 |
| #7651 | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 18670 |
| #20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 ) |
| #20218 | Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 ) |
| #32745 | ; Curators of the CIP; |
| #58566 | Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 49455 |
| #66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) . |
| #68370 | Automatically annotated from API 20STR . |
| #68371 | Automatically annotated from API 50CH acid . |
| #68380 | Automatically annotated from API rID32A . |
| #68381 | Automatically annotated from API rID32STR . |
| #68382 | Automatically annotated from API zym . |
| #69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta . |
| #121999 | Collection of Institut Pasteur ; Curators of the CIP; CIP 108659 |
| #124043 | Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy . |
| #125438 | Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 ) |
| #125439 | Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 . |
| #126262 | A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 ) |
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BacDive in 2025: the core database for prokaryotic strain data